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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:513843..515057+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007559-T1 ID=CBS51388_007559-T1|Name=CBS51388_007559-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1215bp|location=Sequence derived from alignment at An12:513843..515057+ (Aspergillus niger CBS 513.88)
ATGGCAGCCATCAAATATCCATCCACCCCGGCCTCGATCTCCCTCCGCCA
TCACCAGACAAACATGGAAGCAGCTCGATCTGCTAATGCTGGGAGACGCC
AGAGCGAAGAAACTCTGGCCGACGTCCAAGCCAGTCTCGAACGTATTGTT
CGACTTTACAACTATGGGAAGCCACTATTCCCACGAAGACTCCTGAAAGA
CCTTCACGAGCAGATCAGTAAAGGATATGAAAGAGTCAGTATCCCAGATT
GGGATGATCAGCCAAATACATATAGCCTGAAAGTCCCTGAAAATTGCACC
AGAGAATCGTAAGTCTAAGTTTGCCGTTAATCGGACACCGTCCTTCTAAC
GCAAGGACACAGCGACACTTATGTTATCAACTACAGCAGCATCCAGCGCT
TAACATATTTCAATCCACAGTTACCCAAACTGCTCCTAGAGTCCCCGTGC
CCGATCTCCATTGGTTACACACGCAGTCCAAGCCACCCTGGCATCACTCT
CAAAGAGATCCATGATGCATTCAAACAGATCCGCCGGGGGTGGCAGGATA
GCGAGACGTGTTCAAACCTAGAGGGCTCCTTTGTGCAACCAAGGTTCTGG
TCTAGCACAATCACCAGAATCGTTGCATTTGGACTAGGGACTCTCGGTAA
GGCGGAATTCGGGAACGTGTCGGTTCGTTCTTATGCACAGCACGCCGCTA
TGCTAACCATGGCGACTATTTTGAAGGAGAAGCGCATCAGTAAAGGACAG
GATGTACAGTGTTTTGCCCAGGACCCGTGGTACGATGAGAAGGATGTTGA
TTTTCTGAGAGGTCTCGGTATCACGGTGGTGAATGACCCTGAGGGGTTTC
TGATGATCGATGAACACACGCTGGTATTCTCTGTCTGTCCTAATATTCCG
GTTAGGCAGATTGTGGCGGATGTGCAGTGGCCGGCGGCGATGGTTTGGAA
TAGTCCGCTTCCAAAGGGACAGATAAATGAGTGGAAGAGCAGGTTGGGAA
ATGGAGAGGTGTTTTGGACAGGGTGAGTTGTTCTTGTCTTTCGTTCCAAC
TCTTGGTTTTCCGCTAATATGTGGGCTATGTGCAGTCCGATGATGACGGA
TCCTGATTCGGAGAGGGTTTGTGAGATGCTTCGCAACTATGATGGTGCGC
GACTGGTCGATAACAGTGATTATTTTGGTGATTTGACGGTTTATGCGAGA
AGGGTGCGTTCTTAG back to topCoding sequence (CDS) from alignment at An12:513843..515057+ >CBS51388_007559-T1 ID=CBS51388_007559-T1|Name=CBS51388_007559-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3294bp|location=Sequence derived from alignment at An12:513843..515057+ (Aspergillus niger CBS 513.88)
ATGGCAGCCATCAAATATCCATCCACCCCGGCCTCGATCTCCCTCCGCCA
TCACCAGACAAACATGGAAGCAGCTCGATCTGCTAATGCTGGGAGACGCC
AGAGCGAAGAAACTCTGGCCGACGTCCAAGCCAGTCTCGAACGTATTGTT
CGACTTTACAACTATGGGAAGCCACTATTCCCACGAAGACTCCTGAAAGA
CCTTCACGAGCAGATCAGTAAAGGATATGAAAGAGTCAGTATCCCAGATT
GGGATGATCAGCCAAATACATATAGCCTGAAAGTCCCTGAAAATTGCACC
AGAGAATCCGACACTTATGTTATCAACTACAGCAGCATCCAGCGCTTAAC
ATATTTCAATCCACAGTTACCCAAACTGCTCCTAGAGTCCCCGTGCCCGA
TCTCCATTGGTTACACACGCAGTCCAAGCCACCCTGGCATCACTCTCAAA
GAGATCCATGATGCATTCAAACAGATCCGCCGGGGGTGGCAGGATAGCGA
GACGTGTTCAAACCTAGAGGGCTCCTTTGTGCAACCAAGGTTCTGGTCTA
GCACAATCACCAGAATCGTTGCATTTGGACTAGGGACTCTCGGTAAGGCG
GAATTCGGGAACGTGTCGGTTCGTTCTTATGCACAGCACGCCGCTATGCT
AACCATGGCGACTATTTTGAAGGAGAAGCGCATCAGTAAAGGACAGGATG
TACAGTGTTTTGCCCAGGACCCGTGGTACGATGAGAAGGATGTTGATTTT
CTGAGAGGTCTCGGTATCACGGTGGTGAATGACCCTGAGGGGTTTCTGAT
GATCGATGAACACACGCTGGTATTCTCTGTCTGTCCTAATATTCCGGTTA
GGCAGATTGTGGCGGATGTGCAGTGGCCGGCGGCGATGGTTTGGAATAGT
CCGCTTCCAAAGGGACAGATAAATGAGTGGAAGAGCAGGTTGGGAAATGG
AGAGGTGTTTTGGACAGGTCCGATGATGACGGATCCTGATTCGGAGAGGG
TTTGTGAGATGCTTCGCAACTATGATGGTGCGCGACTGGTCGATAACAGT
GATTATTTTGGTGATTTGACGGTTTATGCGAGAAGGGTGCGTTCTTAGAT
GGCAGCCATCAAATATCCATCCACCCCGGCCTCGATCTCCCTCCGCCATC
ACCAGACAAACATGGAAGCAGCTCGATCTGCTAATGCTGGGAGACGCCAG
AGCGAAGAAACTCTGGCCGACGTCCAAGCCAGTCTCGAACGTATTGTTCG
ACTTTACAACTATGGGAAGCCACTATTCCCACGAAGACTCCTGAAAGACC
TTCACGAGCAGATCAGTAAAGGATATGAAAGAGTCAGTATCCCAGATTGG
GATGATCAGCCAAATACATATAGCCTGAAAGTCCCTGAAAATTGCACCAG
AGAATCCGACACTTATGTTATCAACTACAGCAGCATCCAGCGCTTAACAT
ATTTCAATCCACAGTTACCCAAACTGCTCCTAGAGTCCCCGTGCCCGATC
TCCATTGGTTACACACGCAGTCCAAGCCACCCTGGCATCACTCTCAAAGA
GATCCATGATGCATTCAAACAGATCCGCCGGGGGTGGCAGGATAGCGAGA
CGTGTTCAAACCTAGAGGGCTCCTTTGTGCAACCAAGGTTCTGGTCTAGC
ACAATCACCAGAATCGTTGCATTTGGACTAGGGACTCTCGGTAAGGCGGA
ATTCGGGAACGTGTCGGTTCGTTCTTATGCACAGCACGCCGCTATGCTAA
CCATGGCGACTATTTTGAAGGAGAAGCGCATCAGTAAAGGACAGGATGTA
CAGTGTTTTGCCCAGGACCCGTGGTACGATGAGAAGGATGTTGATTTTCT
GAGAGGTCTCGGTATCACGGTGGTGAATGACCCTGAGGGGTTTCTGATGA
TCGATGAACACACGCTGGTATTCTCTGTCTGTCCTAATATTCCGGTTAGG
CAGATTGTGGCGGATGTGCAGTGGCCGGCGGCGATGGTTTGGAATAGTCC
GCTTCCAAAGGGACAGATAAATGAGTGGAAGAGCAGGTTGGGAAATGGAG
AGGTGTTTTGGACAGGTCCGATGATGACGGATCCTGATTCGGAGAGGGTT
TGTGAGATGCTTCGCAACTATGATGGTGCGCGACTGGTCGATAACAGTGA
TTATTTTGGTGATTTGACGGTTTATGCGAGAAGGGTGCGTTCTTAGATGG
CAGCCATCAAATATCCATCCACCCCGGCCTCGATCTCCCTCCGCCATCAC
CAGACAAACATGGAAGCAGCTCGATCTGCTAATGCTGGGAGACGCCAGAG
CGAAGAAACTCTGGCCGACGTCCAAGCCAGTCTCGAACGTATTGTTCGAC
TTTACAACTATGGGAAGCCACTATTCCCACGAAGACTCCTGAAAGACCTT
CACGAGCAGATCAGTAAAGGATATGAAAGAGTCAGTATCCCAGATTGGGA
TGATCAGCCAAATACATATAGCCTGAAAGTCCCTGAAAATTGCACCAGAG
AATCCGACACTTATGTTATCAACTACAGCAGCATCCAGCGCTTAACATAT
TTCAATCCACAGTTACCCAAACTGCTCCTAGAGTCCCCGTGCCCGATCTC
CATTGGTTACACACGCAGTCCAAGCCACCCTGGCATCACTCTCAAAGAGA
TCCATGATGCATTCAAACAGATCCGCCGGGGGTGGCAGGATAGCGAGACG
TGTTCAAACCTAGAGGGCTCCTTTGTGCAACCAAGGTTCTGGTCTAGCAC
AATCACCAGAATCGTTGCATTTGGACTAGGGACTCTCGGTAAGGCGGAAT
TCGGGAACGTGTCGGTTCGTTCTTATGCACAGCACGCCGCTATGCTAACC
ATGGCGACTATTTTGAAGGAGAAGCGCATCAGTAAAGGACAGGATGTACA
GTGTTTTGCCCAGGACCCGTGGTACGATGAGAAGGATGTTGATTTTCTGA
GAGGTCTCGGTATCACGGTGGTGAATGACCCTGAGGGGTTTCTGATGATC
GATGAACACACGCTGGTATTCTCTGTCTGTCCTAATATTCCGGTTAGGCA
GATTGTGGCGGATGTGCAGTGGCCGGCGGCGATGGTTTGGAATAGTCCGC
TTCCAAAGGGACAGATAAATGAGTGGAAGAGCAGGTTGGGAAATGGAGAG
GTGTTTTGGACAGGTCCGATGATGACGGATCCTGATTCGGAGAGGGTTTG
TGAGATGCTTCGCAACTATGATGGTGCGCGACTGGTCGATAACAGTGATT
ATTTTGGTGATTTGACGGTTTATGCGAGAAGGGTGCGTTCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012942 |
| DBxref | PFAM:PF07985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:513843..515057 + |
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