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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:528913..530759- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007562-T1 ID=CBS51388_007562-T1|Name=CBS51388_007562-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1847bp|location=Sequence derived from alignment at An12:528913..530759- (Aspergillus niger CBS 513.88)
ATGCTGGTCCTGGTCCAGTTCAGCAGTTTCATGGTGTGGGTAGTTCCTGG
GGTACATACATATTGTGTCACCACCAAGTTGTCCTGTCATTGCACTAGTT
TTAGCTAGGACCAGGATGGGGGATGCTTAACCCAGCCGAGCATCATCACT
TGCTACTATCCACTGTTGTTAGATACTATCAAAAATGCATAGGAATTATC
TAGCTAGCTAGTTAGTAGACAATAACCAACCCCATACAATCAAAACCAAC
CCAACAAGATACACCAACCACAATCATCAAACCACCATGTCCACCAATAC
CAGCCCCATCAAAATAGAAATCGCCATAATGGCTCCGGCCTAATCGGGAC
CCTCCTGGCCCTAGGCCTCCTCAACATCCCCATCCCCAACACCACCAAAG
ACCCTCAATCTACCAACGAAGGCCAAAGAAGCACAACCCTCAGCATAAAA
ATCTATGAACAATCCCCCACCGCGCACGAACTCGGCGCCGGAATCGGCTT
CACGACCTGCGCGCGGAAATGCATGGCGCTCATGGACCCCCGCATCGCGG
AGTGTGTGGCCCGCGTAGCGACACTTAACGGCGAACCAGAGGATCCAGAT
TACTGTATGCGGTTTGTGGATGGGTTTAGGACGTATACGGAGGGTGATTG
TTGGGGGACGACGTCGAAAGGGGATGCGGAGGGGGGAATTGGTGTGGATG
TTAGGGGGGGAGGTAGTGATAGAGTTAATGATGAATCTGATAGTAGAGAT
GAAGATAAAGATGACAATGGGGGCGAAGGTGTGTATGTCTCCGGGAAAGT
CTACAAATTGTATGCCGGCCCACGCCGCTTCGAAGGTTGCCACCGGGGCC
AGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAGGGAGCAGTGGAGTAT
AGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTCGGGGAGGATTCAGTT
GGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATCTTGGTAAGTGTATCT
TCATCCAAATTTCTAAGTCTTTCTTAAACAAGATGCTAATAAGTGATCAG
TCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTACCCC
CAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGTCCC
CATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCCAAC
ACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCGAAG
CAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTGGAC
GCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAGCGT
TCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCTGAG
GAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCCGCG
GTATGCGGAGGGAAGAGTAGCTCTGGTAGGGGATGCGGCGCATGCGTCGT
CGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTGGCG
CTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGGGACGGA
GGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGGTCAGGT
ATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGGACG
TATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTTTGC
AGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAGAGGCCA
TGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAACTAG back to topCoding sequence (CDS) from alignment at An12:528913..530759- >CBS51388_007562-T1 ID=CBS51388_007562-T1|Name=CBS51388_007562-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4509bp|location=Sequence derived from alignment at An12:528913..530759- (Aspergillus niger CBS 513.88)
TCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTACCCC
CAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGTCCC
CATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCCAAC
ACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCGAAG
CAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTGGAC
GCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAGCGT
TCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCTGAG
GAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCCGCG
GTATGCGGAGGGAAGAGTAGCTCTGGTAGGGGATGCGGCGCATGCGTCGT
CGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTGGCG
CTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGGGACGGA
GGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGGTCAGGT
ATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGGACG
TATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTTTGC
AGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAGAGGCCA
TGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAACTAGAAA
TCGCCATAATGGCTCCGGCCTAATCGGGACCCTCCTGGCCCTAGGCCTCC
TCAACATCCCCATCCCCAACACCACCAAAGACCCTCAATCTACCAACGAA
GGCCAAAGAAGCACAACCCTCAGCATAAAAATCTATGAACAATCCCCCAC
CGCGCACGAACTCGGCGCCGGAATCGGCTTCACGACCTGCGCGCGGAAAT
GCATGGCGCTCATGGACCCCCGCATCGCGGAGTGTGTGGCCCGCGTAGCG
ACACTTAACGGCGAACCAGAGGATCCAGATTACTGTATGCGGTTTGTGGA
TGGGTTTAGGACGTATACGGAGGGTGATTGTTGGGGGACGACGTCGAAAG
GGGATGCGGAGGGGGGAATTGGTGTGGATGTTAGGGGGGGAGGTAGTGAT
AGAGTTAATGATGAATCTGATAGTAGAGATGAAGATAAAGATGACAATGG
GGGCGAAGGTGTGTATGTCTCCGGGAAAGTCTACAAATTGTATGCCGGCC
CACGCCGCTTCGAAGGTTGCCACCGGGGCCAGTTCCTGGAAGAAGTGATG
AAACTCATGCCTGAGGGAGCAGTGGAGTATAGTAAGCGGGTGGAGGGGTA
TGAGTATCTCCCTTCGGGGAGGATTCAGTTGGGGTTTAGTGATGGAGGGA
GGGTGGAGTGTGATCTTGATGCTGGTCCTGGTCCAGTTCAGCAGTTTCAT
GGTTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTAC
CCCCAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGT
CCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCC
AACACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCG
AAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTG
GACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAG
CGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCT
GAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCC
GCGGTATGCGGAGGGAAGAGTAGCTCTGGTAGGGGATGCGGCGCATGCGT
CGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTG
GCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGGGAC
GGAGGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGGTCA
GGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGG
ACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTT
TGCAGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAGAGG
CCATGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAACTAG
AAATCGCCATAATGGCTCCGGCCTAATCGGGACCCTCCTGGCCCTAGGCC
TCCTCAACATCCCCATCCCCAACACCACCAAAGACCCTCAATCTACCAAC
GAAGGCCAAAGAAGCACAACCCTCAGCATAAAAATCTATGAACAATCCCC
CACCGCGCACGAACTCGGCGCCGGAATCGGCTTCACGACCTGCGCGCGGA
AATGCATGGCGCTCATGGACCCCCGCATCGCGGAGTGTGTGGCCCGCGTA
GCGACACTTAACGGCGAACCAGAGGATCCAGATTACTGTATGCGGTTTGT
GGATGGGTTTAGGACGTATACGGAGGGTGATTGTTGGGGGACGACGTCGA
AAGGGGATGCGGAGGGGGGAATTGGTGTGGATGTTAGGGGGGGAGGTAGT
GATAGAGTTAATGATGAATCTGATAGTAGAGATGAAGATAAAGATGACAA
TGGGGGCGAAGGTGTGTATGTCTCCGGGAAAGTCTACAAATTGTATGCCG
GCCCACGCCGCTTCGAAGGTTGCCACCGGGGCCAGTTCCTGGAAGAAGTG
ATGAAACTCATGCCTGAGGGAGCAGTGGAGTATAGTAAGCGGGTGGAGGG
GTATGAGTATCTCCCTTCGGGGAGGATTCAGTTGGGGTTTAGTGATGGAG
GGAGGGTGGAGTGTGATCTTGATGCTGGTCCTGGTCCAGTTCAGCAGTTT
CATGGTTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTC
TACCCCCAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCT
GGTCCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCC
GCCAACACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTC
GCGAAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGA
CTGGACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGG
AAGCGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTG
CCTGAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGT
GCCGCGGTATGCGGAGGGAAGAGTAGCTCTGGTAGGGGATGCGGCGCATG
CGTCGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCA
TTGGCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGG
GACGGAGGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGG
TCAGGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGA
TGGACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGC
GTTTGCAGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAG
AGGCCATGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAAC
TAGAAATCGCCATAATGGCTCCGGCCTAATCGGGACCCTCCTGGCCCTAG
GCCTCCTCAACATCCCCATCCCCAACACCACCAAAGACCCTCAATCTACC
AACGAAGGCCAAAGAAGCACAACCCTCAGCATAAAAATCTATGAACAATC
CCCCACCGCGCACGAACTCGGCGCCGGAATCGGCTTCACGACCTGCGCGC
GGAAATGCATGGCGCTCATGGACCCCCGCATCGCGGAGTGTGTGGCCCGC
GTAGCGACACTTAACGGCGAACCAGAGGATCCAGATTACTGTATGCGGTT
TGTGGATGGGTTTAGGACGTATACGGAGGGTGATTGTTGGGGGACGACGT
CGAAAGGGGATGCGGAGGGGGGAATTGGTGTGGATGTTAGGGGGGGAGGT
AGTGATAGAGTTAATGATGAATCTGATAGTAGAGATGAAGATAAAGATGA
CAATGGGGGCGAAGGTGTGTATGTCTCCGGGAAAGTCTACAAATTGTATG
CCGGCCCACGCCGCTTCGAAGGTTGCCACCGGGGCCAGTTCCTGGAAGAA
GTGATGAAACTCATGCCTGAGGGAGCAGTGGAGTATAGTAAGCGGGTGGA
GGGGTATGAGTATCTCCCTTCGGGGAGGATTCAGTTGGGGTTTAGTGATG
GAGGGAGGGTGGAGTGTGATCTTGATGCTGGTCCTGGTCCAGTTCAGCAG
TTTCATGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.2 |
| Note | SMCOG1087:hypothetical protein |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:528913..530759 - |
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