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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:535711..537392+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007564-T1 ID=CBS51388_007564-T1|Name=CBS51388_007564-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1682bp|location=Sequence derived from alignment at An12:535711..537392+ (Aspergillus niger CBS 513.88)
ATGGCCAGTCTCTTTGACGGCACGGTCATTGACTGTGACAGTGAAGAAGA
TCCGCTGCGAGACCTGCCACCGCTGCCCGATCCGCTCTCAGGCACGATGC
CCGATCAGTCTAGCGACGACCGTCGGACTGGGACGCGATCTCCGCGATCG
CCCGAATCTCCGAACCGGCCTTCCAGCCTCGTGTCTGACTTGATGCGAGC
CGATCTGTACGCTTCTCTTTAATGATTTGCAAGCTGCCACTAACTGGTGC
AGGGACCAACTTTACTTTGACCGGGTGCACCCCTTCGCCCCCATTCTGCA
ACGCTGGCGCTACCATACGTGGGCGAAGCAGCCCAAGAAGACGGAGGCAC
AAACCTGCCTTCAGTATGCCATGTGGACGCTGGCAGCCAGTATGTCGGCT
CAGTTTCAGTCTCTCCGCGACCGGTTGTATGCAGAGACGCGGCGGATGCT
CGACTCCCTGGATCTCCAAGGCCCTCCTACGGATACGGCGCCAGGGATCG
AGCCAGCGCAGGCGTGGATCCTCGTCTGCATCTACGAGTACATGCAGCAA
TCGCCGCTGCAGGCATGGATGAGTACAGGACGATGCTGCCGGTTAGTCCT
GGGAATGCGACTGTACGAGCTGGACGACCCGAATAGTCCGGTGACGATGG
CACGCGAGCACGAGACGGTGTTGGTGGACTGGATTGGGCTGGAGGAGCAG
CGCCGGACGTTCTGGATGGCCTACAGTCTTGATCGTTTTATCAGTTTTCA
CAACGGGTTGCCGTTCACCTTGGATGAGCAGCTGGTGAGTCTGTCCCTTC
TATCATTGATTCAAGCAGGGCTAATAATAGTAGATCACCACACGCCTTCC
TTGCCCAGAAGAAGACTTTCAAGCTGGGCAGCCCACCCTGACGGCCTATC
TGTCCGATGTCATGGCCCCTTCACCCCCTACCTCCCCCATTCCCTCTGCA
GCCAACACGATACCCTCGCCTTCTCTCTTCGCCCGTCCTCATGCCTCTCA
CTCTCAAATCCTCCTCCCTCACCCTCCCCCACCCACCCCAACTACCACTC
CAACCCTCGGCCTCCCAGATCCCCTCTCCTCCTTTACCGAACTCATCCTC
ATCGCCACCATCGTCGGCCGCGCTCTCACCCACCGCCAAACGTTGGCCGT
CGAGCAGATTCACCCGCCCAACTTTACTCATATACCCTCTGATAACTTCT
GGGCGCGTCATAACTATCTACACGAACTACTTACCTACCGCATTGCCACC
CTATCCAGCTACCCGCATGTTGACCCCATGCTGATGTTCGCCCGCATTGT
GGCCCAAAGCATGGTCCTATTCCTGCAGAGCGTACTCGAGAGCATTACCT
GGAAATCTGGGGATCACTTGCTGGGGATTATCGAGTTCGAGCGGGTGTGT
GTTCTGGCTGCACATGAAGTGGTGGGGTTGGTGAAGATGCAGGGTCAGCT
GGGGTATTTCAAGGTAATTCCTCTTGCCTCCTTCAGTTGTGAATCAAAAG
ACTAATGGTCTTAGGTGCATCCCCTAACGCCGATCCCTCTCATGATGTGT
ACCGAGTTCTTCTCGTCGCACGGCTACCTCGATCCATCGTTCGAGGTGAT
GATGCATGGACTTGTCGAGAGCTTGCATGATCTGGATAGGGTGAAGAATC
CAGTGCAGAGTCCGCCGTTGTCGGTTCAATAA back to topCoding sequence (CDS) from alignment at An12:535711..537392+ >CBS51388_007564-T1 ID=CBS51388_007564-T1|Name=CBS51388_007564-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6144bp|location=Sequence derived from alignment at An12:535711..537392+ (Aspergillus niger CBS 513.88)
ATGGCCAGTCTCTTTGACGGCACGGTCATTGACTGTGACAGTGAAGAAGA
TCCGCTGCGAGACCTGCCACCGCTGCCCGATCCGCTCTCAGGCACGATGC
CCGATCAGTCTAGCGACGACCGTCGGACTGGGACGCGATCTCCGCGATCG
CCCGAATCTCCGAACCGGCCTTCCAGCCTCGTGTCTGACTTGATGCGAGC
CGATCTGGACCAACTTTACTTTGACCGGGTGCACCCCTTCGCCCCCATTC
TGCAACGCTGGCGCTACCATACGTGGGCGAAGCAGCCCAAGAAGACGGAG
GCACAAACCTGCCTTCAGTATGCCATGTGGACGCTGGCAGCCAGTATGTC
GGCTCAGTTTCAGTCTCTCCGCGACCGGTTGTATGCAGAGACGCGGCGGA
TGCTCGACTCCCTGGATCTCCAAGGCCCTCCTACGGATACGGCGCCAGGG
ATCGAGCCAGCGCAGGCGTGGATCCTCGTCTGCATCTACGAGTACATGCA
GCAATCGCCGCTGCAGGCATGGATGAGTACAGGACGATGCTGCCGGTTAG
TCCTGGGAATGCGACTGTACGAGCTGGACGACCCGAATAGTCCGGTGACG
ATGGCACGCGAGCACGAGACGGTGTTGGTGGACTGGATTGGGCTGGAGGA
GCAGCGCCGGACGTTCTGGATGGCCTACAGTCTTGATCGTTTTATCAGTT
TTCACAACGGGTTGCCGTTCACCTTGGATGAGCAGCTGATCACCACACGC
CTTCCTTGCCCAGAAGAAGACTTTCAAGCTGGGCAGCCCACCCTGACGGC
CTATCTGTCCGATGTCATGGCCCCTTCACCCCCTACCTCCCCCATTCCCT
CTGCAGCCAACACGATACCCTCGCCTTCTCTCTTCGCCCGTCCTCATGCC
TCTCACTCTCAAATCCTCCTCCCTCACCCTCCCCCACCCACCCCAACTAC
CACTCCAACCCTCGGCCTCCCAGATCCCCTCTCCTCCTTTACCGAACTCA
TCCTCATCGCCACCATCGTCGGCCGCGCTCTCACCCACCGCCAAACGTTG
GCCGTCGAGCAGATTCACCCGCCCAACTTTACTCATATACCCTCTGATAA
CTTCTGGGCGCGTCATAACTATCTACACGAACTACTTACCTACCGCATTG
CCACCCTATCCAGCTACCCGCATGTTGACCCCATGCTGATGTTCGCCCGC
ATTGTGGCCCAAAGCATGGTCCTATTCCTGCAGAGCGTACTCGAGAGCAT
TACCTGGAAATCTGGGGATCACTTGCTGGGGATTATCGAGTTCGAGCGGG
TGTGTGTTCTGGCTGCACATGAAGTGGTGGGGTTGGTGAAGATGCAGGGT
CAGCTGGGGTATTTCAAGGTGCATCCCCTAACGCCGATCCCTCTCATGAT
GTGTACCGAGTTCTTCTCGTCGCACGGCTACCTCGATCCATCGTTCGAGG
TGATGATGCATGGACTTGTCGAGAGCTTGCATGATCTGGATAGGGTGAAG
AATCCAGTGCAGAGTCCGCCGTTGTCGGTTCAATAAATGGCCAGTCTCTT
TGACGGCACGGTCATTGACTGTGACAGTGAAGAAGATCCGCTGCGAGACC
TGCCACCGCTGCCCGATCCGCTCTCAGGCACGATGCCCGATCAGTCTAGC
GACGACCGTCGGACTGGGACGCGATCTCCGCGATCGCCCGAATCTCCGAA
CCGGCCTTCCAGCCTCGTGTCTGACTTGATGCGAGCCGATCTGGACCAAC
TTTACTTTGACCGGGTGCACCCCTTCGCCCCCATTCTGCAACGCTGGCGC
TACCATACGTGGGCGAAGCAGCCCAAGAAGACGGAGGCACAAACCTGCCT
TCAGTATGCCATGTGGACGCTGGCAGCCAGTATGTCGGCTCAGTTTCAGT
CTCTCCGCGACCGGTTGTATGCAGAGACGCGGCGGATGCTCGACTCCCTG
GATCTCCAAGGCCCTCCTACGGATACGGCGCCAGGGATCGAGCCAGCGCA
GGCGTGGATCCTCGTCTGCATCTACGAGTACATGCAGCAATCGCCGCTGC
AGGCATGGATGAGTACAGGACGATGCTGCCGGTTAGTCCTGGGAATGCGA
CTGTACGAGCTGGACGACCCGAATAGTCCGGTGACGATGGCACGCGAGCA
CGAGACGGTGTTGGTGGACTGGATTGGGCTGGAGGAGCAGCGCCGGACGT
TCTGGATGGCCTACAGTCTTGATCGTTTTATCAGTTTTCACAACGGGTTG
CCGTTCACCTTGGATGAGCAGCTGATCACCACACGCCTTCCTTGCCCAGA
AGAAGACTTTCAAGCTGGGCAGCCCACCCTGACGGCCTATCTGTCCGATG
TCATGGCCCCTTCACCCCCTACCTCCCCCATTCCCTCTGCAGCCAACACG
ATACCCTCGCCTTCTCTCTTCGCCCGTCCTCATGCCTCTCACTCTCAAAT
CCTCCTCCCTCACCCTCCCCCACCCACCCCAACTACCACTCCAACCCTCG
GCCTCCCAGATCCCCTCTCCTCCTTTACCGAACTCATCCTCATCGCCACC
ATCGTCGGCCGCGCTCTCACCCACCGCCAAACGTTGGCCGTCGAGCAGAT
TCACCCGCCCAACTTTACTCATATACCCTCTGATAACTTCTGGGCGCGTC
ATAACTATCTACACGAACTACTTACCTACCGCATTGCCACCCTATCCAGC
TACCCGCATGTTGACCCCATGCTGATGTTCGCCCGCATTGTGGCCCAAAG
CATGGTCCTATTCCTGCAGAGCGTACTCGAGAGCATTACCTGGAAATCTG
GGGATCACTTGCTGGGGATTATCGAGTTCGAGCGGGTGTGTGTTCTGGCT
GCACATGAAGTGGTGGGGTTGGTGAAGATGCAGGGTCAGCTGGGGTATTT
CAAGGTGCATCCCCTAACGCCGATCCCTCTCATGATGTGTACCGAGTTCT
TCTCGTCGCACGGCTACCTCGATCCATCGTTCGAGGTGATGATGCATGGA
CTTGTCGAGAGCTTGCATGATCTGGATAGGGTGAAGAATCCAGTGCAGAG
TCCGCCGTTGTCGGTTCAATAAATGGCCAGTCTCTTTGACGGCACGGTCA
TTGACTGTGACAGTGAAGAAGATCCGCTGCGAGACCTGCCACCGCTGCCC
GATCCGCTCTCAGGCACGATGCCCGATCAGTCTAGCGACGACCGTCGGAC
TGGGACGCGATCTCCGCGATCGCCCGAATCTCCGAACCGGCCTTCCAGCC
TCGTGTCTGACTTGATGCGAGCCGATCTGGACCAACTTTACTTTGACCGG
GTGCACCCCTTCGCCCCCATTCTGCAACGCTGGCGCTACCATACGTGGGC
GAAGCAGCCCAAGAAGACGGAGGCACAAACCTGCCTTCAGTATGCCATGT
GGACGCTGGCAGCCAGTATGTCGGCTCAGTTTCAGTCTCTCCGCGACCGG
TTGTATGCAGAGACGCGGCGGATGCTCGACTCCCTGGATCTCCAAGGCCC
TCCTACGGATACGGCGCCAGGGATCGAGCCAGCGCAGGCGTGGATCCTCG
TCTGCATCTACGAGTACATGCAGCAATCGCCGCTGCAGGCATGGATGAGT
ACAGGACGATGCTGCCGGTTAGTCCTGGGAATGCGACTGTACGAGCTGGA
CGACCCGAATAGTCCGGTGACGATGGCACGCGAGCACGAGACGGTGTTGG
TGGACTGGATTGGGCTGGAGGAGCAGCGCCGGACGTTCTGGATGGCCTAC
AGTCTTGATCGTTTTATCAGTTTTCACAACGGGTTGCCGTTCACCTTGGA
TGAGCAGCTGATCACCACACGCCTTCCTTGCCCAGAAGAAGACTTTCAAG
CTGGGCAGCCCACCCTGACGGCCTATCTGTCCGATGTCATGGCCCCTTCA
CCCCCTACCTCCCCCATTCCCTCTGCAGCCAACACGATACCCTCGCCTTC
TCTCTTCGCCCGTCCTCATGCCTCTCACTCTCAAATCCTCCTCCCTCACC
CTCCCCCACCCACCCCAACTACCACTCCAACCCTCGGCCTCCCAGATCCC
CTCTCCTCCTTTACCGAACTCATCCTCATCGCCACCATCGTCGGCCGCGC
TCTCACCCACCGCCAAACGTTGGCCGTCGAGCAGATTCACCCGCCCAACT
TTACTCATATACCCTCTGATAACTTCTGGGCGCGTCATAACTATCTACAC
GAACTACTTACCTACCGCATTGCCACCCTATCCAGCTACCCGCATGTTGA
CCCCATGCTGATGTTCGCCCGCATTGTGGCCCAAAGCATGGTCCTATTCC
TGCAGAGCGTACTCGAGAGCATTACCTGGAAATCTGGGGATCACTTGCTG
GGGATTATCGAGTTCGAGCGGGTGTGTGTTCTGGCTGCACATGAAGTGGT
GGGGTTGGTGAAGATGCAGGGTCAGCTGGGGTATTTCAAGGTGCATCCCC
TAACGCCGATCCCTCTCATGATGTGTACCGAGTTCTTCTCGTCGCACGGC
TACCTCGATCCATCGTTCGAGGTGATGATGCATGGACTTGTCGAGAGCTT
GCATGATCTGGATAGGGTGAAGAATCCAGTGCAGAGTCCGCCGTTGTCGG
TTCAATAAATGGCCAGTCTCTTTGACGGCACGGTCATTGACTGTGACAGT
GAAGAAGATCCGCTGCGAGACCTGCCACCGCTGCCCGATCCGCTCTCAGG
CACGATGCCCGATCAGTCTAGCGACGACCGTCGGACTGGGACGCGATCTC
CGCGATCGCCCGAATCTCCGAACCGGCCTTCCAGCCTCGTGTCTGACTTG
ATGCGAGCCGATCTGGACCAACTTTACTTTGACCGGGTGCACCCCTTCGC
CCCCATTCTGCAACGCTGGCGCTACCATACGTGGGCGAAGCAGCCCAAGA
AGACGGAGGCACAAACCTGCCTTCAGTATGCCATGTGGACGCTGGCAGCC
AGTATGTCGGCTCAGTTTCAGTCTCTCCGCGACCGGTTGTATGCAGAGAC
GCGGCGGATGCTCGACTCCCTGGATCTCCAAGGCCCTCCTACGGATACGG
CGCCAGGGATCGAGCCAGCGCAGGCGTGGATCCTCGTCTGCATCTACGAG
TACATGCAGCAATCGCCGCTGCAGGCATGGATGAGTACAGGACGATGCTG
CCGGTTAGTCCTGGGAATGCGACTGTACGAGCTGGACGACCCGAATAGTC
CGGTGACGATGGCACGCGAGCACGAGACGGTGTTGGTGGACTGGATTGGG
CTGGAGGAGCAGCGCCGGACGTTCTGGATGGCCTACAGTCTTGATCGTTT
TATCAGTTTTCACAACGGGTTGCCGTTCACCTTGGATGAGCAGCTGATCA
CCACACGCCTTCCTTGCCCAGAAGAAGACTTTCAAGCTGGGCAGCCCACC
CTGACGGCCTATCTGTCCGATGTCATGGCCCCTTCACCCCCTACCTCCCC
CATTCCCTCTGCAGCCAACACGATACCCTCGCCTTCTCTCTTCGCCCGTC
CTCATGCCTCTCACTCTCAAATCCTCCTCCCTCACCCTCCCCCACCCACC
CCAACTACCACTCCAACCCTCGGCCTCCCAGATCCCCTCTCCTCCTTTAC
CGAACTCATCCTCATCGCCACCATCGTCGGCCGCGCTCTCACCCACCGCC
AAACGTTGGCCGTCGAGCAGATTCACCCGCCCAACTTTACTCATATACCC
TCTGATAACTTCTGGGCGCGTCATAACTATCTACACGAACTACTTACCTA
CCGCATTGCCACCCTATCCAGCTACCCGCATGTTGACCCCATGCTGATGT
TCGCCCGCATTGTGGCCCAAAGCATGGTCCTATTCCTGCAGAGCGTACTC
GAGAGCATTACCTGGAAATCTGGGGATCACTTGCTGGGGATTATCGAGTT
CGAGCGGGTGTGTGTTCTGGCTGCACATGAAGTGGTGGGGTTGGTGAAGA
TGCAGGGTCAGCTGGGGTATTTCAAGGTGCATCCCCTAACGCCGATCCCT
CTCATGATGTGTACCGAGTTCTTCTCGTCGCACGGCTACCTCGATCCATC
GTTCGAGGTGATGATGCATGGACTTGTCGAGAGCTTGCATGATCTGGATA
GGGTGAAGAATCCAGTGCAGAGTCCGCCGTTGTCGGTTCAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.2 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:535711..537392 + |
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