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CBS51388_007576-T1, CBS51388_007576-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007576-T1
Unique NameCBS51388_007576-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:573026..574930-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007576-T1 ID=CBS51388_007576-T1|Name=CBS51388_007576-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1905bp|location=Sequence derived from alignment at An12:573026..574930- (Aspergillus niger CBS 513.88)
ATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTG
TGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAAT
GTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGT
GCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGT
GTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAAC
AGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCC
TTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGAT
TTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAAC
ACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGC
CCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTAT
GCAGGACGAATTGTAAGCACCTCAATCAGGAATCAAAACACAATGCTAAT
TATGACTAGAGACCAGCTTTACCTAGACCGTGTCCATAATTCTATCCCAA
TCCTCCATCAGCGACGGTACATGTCCTGGTCCAAATCTAGTACCAAAACG
GAACCCCGTAGATGCTTACAGTATGCAATGTGGACACTAGCCGCATTGCT
CTCCACCCAGTTCCGAGACATGATAGAACCGCTGTATCAGGAGACAAAGC
GCATGCTCGACCAACTCACTGTTGCGGCAAATGAGGACAGTAATATTGAC
ACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACCTTTGAGTCAATGCG
CACATATCATCGACAGGCATGGATGAGCGCCGGGAGTGCGTTTCGCTTCG
TGCAAGCCATGCACTATCATGAGCTCGACAGCCTAGATGGCAAAAGAGGC
TCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTCGAGGAGAGACGTCG
AGTGTTCTGGATGGCGTACTTTTTGGACCATATCATCAGTATGCGCGGCG
ACTGGCCAATCACTCTGAATGAGCATGTGGTAAGAATGATCCCAGCCCAT
TACTATATCCAGTTTTTGTATTCAATTTTGTAGATCTGCACCCGTCTTCC
AGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCGTTCC
TATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTTCACC
GAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAGACA
ACAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGGACGG
AACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTGCTT
TCGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTACTATT
TACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACTATGA
TCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAGGTAT
GAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAACGAC
ACTGCCCGAGCTGCCGTTTTCTAAGGTAAGATCTTTTTCTTCAAAAAGCC
CGGCTTTTAACAATTCCTTTGTAGGTCCACCCTTTGATGCCCATGCCATT
GTTCATTTGCGCCGAGTTTCTCTACAGCAACATACACAATGGCATATCCG
TCCAATCGCCCATCCAGGACTTGTTTCATATTTTCCGTGAGCTCAAGAAT
GTTAATAATCACGAGCAAAGCTACCTGGATCTACTACCGCGATCATGTAT
TTCAAAAACAGCGGTGATGGTAGGGCTTGGTGATGAGGGGGGTGCGAGTA
GTTAG
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Coding sequence (CDS) from alignment at An12:573026..574930-

>CBS51388_007576-T1 ID=CBS51388_007576-T1|Name=CBS51388_007576-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7020bp|location=Sequence derived from alignment at An12:573026..574930- (Aspergillus niger CBS 513.88)
GTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCGAGTTTCTCTA
CAGCAACATACACAATGGCATATCCGTCCAATCGCCCATCCAGGACTTGT
TTCATATTTTCCGTGAGCTCAAGAATGTTAATAATCACGAGCAAAGCTAC
CTGGATCTACTACCGCGATCATGTATTTCAAAAACAGCGGTGATGGTAGG
GCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCTGCACCCGTCTTCCAG
CGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCGTTCCTA
TCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTTCACCGA
GTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAGACAAC
AGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGGACGGAA
CAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTGCTTTC
GCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTACTATTTA
CGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACTATGATC
CAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAGGTATGA
GCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAACGACAC
TGCCCGAGCTGCCGTTTTCTAAGAGACCAGCTTTACCTAGACCGTGTCCA
TAATTCTATCCCAATCCTCCATCAGCGACGGTACATGTCCTGGTCCAAAT
CTAGTACCAAAACGGAACCCCGTAGATGCTTACAGTATGCAATGTGGACA
CTAGCCGCATTGCTCTCCACCCAGTTCCGAGACATGATAGAACCGCTGTA
TCAGGAGACAAAGCGCATGCTCGACCAACTCACTGTTGCGGCAAATGAGG
ACAGTAATATTGACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACC
TTTGAGTCAATGCGCACATATCATCGACAGGCATGGATGAGCGCCGGGAG
TGCGTTTCGCTTCGTGCAAGCCATGCACTATCATGAGCTCGACAGCCTAG
ATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTC
GAGGAGAGACGTCGAGTGTTCTGGATGGCGTACTTTTTGGACCATATCAT
CAGTATGCGCGGCGACTGGCCAATCACTCTGAATGAGCATGTGATGAGCC
AACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTGTGACGAG
TGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAATGTGGACG
CTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGTGCGCGAG
GACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGTGTATCTG
GAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAACAGGATCT
CCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCCTTGGTGA
GGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGATTTCCGCG
GGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAACACGACTT
GACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGCCCAATTA
TATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTATGCAGGAC
GAATTGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCGAGTTT
CTCTACAGCAACATACACAATGGCATATCCGTCCAATCGCCCATCCAGGA
CTTGTTTCATATTTTCCGTGAGCTCAAGAATGTTAATAATCACGAGCAAA
GCTACCTGGATCTACTACCGCGATCATGTATTTCAAAAACAGCGGTGATG
GTAGGGCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCTGCACCCGTCT
TCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCGT
TCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTTC
ACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAG
ACAACAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGGA
CGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTG
CTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTACT
ATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACTA
TGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAGG
TATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAAC
GACACTGCCCGAGCTGCCGTTTTCTAAGAGACCAGCTTTACCTAGACCGT
GTCCATAATTCTATCCCAATCCTCCATCAGCGACGGTACATGTCCTGGTC
CAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTACAGTATGCAATGT
GGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGACATGATAGAACCG
CTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCACTGTTGCGGCAAA
TGAGGACAGTAATATTGACACCGAAATCGGCCAAGCCTGGGTTCTTCTCG
TGACCTTTGAGTCAATGCGCACATATCATCGACAGGCATGGATGAGCGCC
GGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATCATGAGCTCGACAG
CCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGATGACTTTATTG
AGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTACTTTTTGGACCAT
ATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGAATGAGCATGTGAT
GAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTGTG
ACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAATGT
GGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGTGC
GCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGTGT
ATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAACAG
GATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCCTT
GGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGATTT
CCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAACAC
GACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGCCC
AATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTATGC
AGGACGAATTGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCG
AGTTTCTCTACAGCAACATACACAATGGCATATCCGTCCAATCGCCCATC
CAGGACTTGTTTCATATTTTCCGTGAGCTCAAGAATGTTAATAATCACGA
GCAAAGCTACCTGGATCTACTACCGCGATCATGTATTTCAAAAACAGCGG
TGATGGTAGGGCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCTGCACC
CGTCTTCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGG
ACCGTTCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGT
CGTTCACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTC
CAAAGACAACAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGA
CTGGACGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTC
AGGTGCTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTA
CTACTATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAA
AACTATGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAAT
TCAGGTATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTG
GCAACGACACTGCCCGAGCTGCCGTTTTCTAAGAGACCAGCTTTACCTAG
ACCGTGTCCATAATTCTATCCCAATCCTCCATCAGCGACGGTACATGTCC
TGGTCCAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTACAGTATGC
AATGTGGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGACATGATAG
AACCGCTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCACTGTTGCG
GCAAATGAGGACAGTAATATTGACACCGAAATCGGCCAAGCCTGGGTTCT
TCTCGTGACCTTTGAGTCAATGCGCACATATCATCGACAGGCATGGATGA
GCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATCATGAGCTC
GACAGCCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGATGACTT
TATTGAGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTACTTTTTGG
ACCATATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGAATGAGCAT
GTGATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGC
CTGTGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTC
AATGTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGC
AGTGCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACT
CGTGTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGC
AACAGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTA
CCCTTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTG
GATTTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTAC
AACACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTT
GGCCCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCT
TATGCAGGACGAATTGTCCACCCTTTGATGCCCATGCCATTGTTCATTTG
CGCCGAGTTTCTCTACAGCAACATACACAATGGCATATCCGTCCAATCGC
CCATCCAGGACTTGTTTCATATTTTCCGTGAGCTCAAGAATGTTAATAAT
CACGAGCAAAGCTACCTGGATCTACTACCGCGATCATGTATTTCAAAAAC
AGCGGTGATGGTAGGGCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCT
GCACCCGTCTTCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAA
CTAGGACCGTTCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCG
ATCGTCGTTCACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTC
TCTTCCAAAGACAACAGTGTCAAATATCCAAGGCATACGGGGATATGACA
CTCGACTGGACGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCG
ATTTCAGGTGCTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGACC
ACTTACTACTATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTAC
TGCAAAACTATGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAG
CGAATTCAGGTATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCC
GTCTGGCAACGACACTGCCCGAGCTGCCGTTTTCTAAGAGACCAGCTTTA
CCTAGACCGTGTCCATAATTCTATCCCAATCCTCCATCAGCGACGGTACA
TGTCCTGGTCCAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTACAG
TATGCAATGTGGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGACAT
GATAGAACCGCTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCACTG
TTGCGGCAAATGAGGACAGTAATATTGACACCGAAATCGGCCAAGCCTGG
GTTCTTCTCGTGACCTTTGAGTCAATGCGCACATATCATCGACAGGCATG
GATGAGCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATCATG
AGCTCGACAGCCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGAT
GACTTTATTGAGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTACTT
TTTGGACCATATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGAATG
AGCATGTGATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGT
ATCGCCTGTGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAA
ACCTCAATGTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCC
AGCGCAGTGCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAAC
CGACTCGTGTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGA
TACGCAACAGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGC
TACTACCCTTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAG
CCCTGGATTTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCT
TCTACAACACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCT
CCGTTGGCCCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACC
GGTCTTATGCAGGACGAATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007576CBS51388_007576Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007576-T1CBS51388_007576-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007576-T1.cdsCBS51388_007576-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007576-T1.exon4CBS51388_007576-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007576-T1.exon3CBS51388_007576-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007576-T1.exon2CBS51388_007576-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007576-T1.exon1CBS51388_007576-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:573026..574930 -
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