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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:597692..599278+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007585-T1 ID=CBS51388_007585-T1|Name=CBS51388_007585-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1587bp|location=Sequence derived from alignment at An12:597692..599278+ (Aspergillus niger CBS 513.88)
ATGCTTCCTAAACTCGCAACCTTAGTCCTCGCACCCGCCTTAGCGAATGG
CGTTGCTGCCGCTGCCGAGCCCTTGTATAAAAAGCCGGTTAACATCCCCG
GTTACGGCTACGTGCAAGGAAAGGCTGCTGTCAACTCCAGCGTGTCCGAG
TACATTTCCAACTGGGAGAACATTTCCTTCTTTGGAGGTATTCCTTTCGG
TGCTGATACCTCTGGCGCAAACCGTTGGCGCGACCCCCAGCCTGTCGAGC
CCTGGAATGGCACTCTCAATGCGACTGAATTCGGTGCTATCTGCCCTATT
ACTCTCTCTGTCCTGGCAGATTACGCCCAGAGTGAGGATTGTCTGAACCT
CAACATCTGGACTCCCGCTACTTCGGCCGATGAGAAGCTTCCCGTGGCCA
TCTGGAGTTATGGGGCCGGAACGGCGCCGCCGCAGACCACCTACAACGGT
GCGGGTGTGGCCGACAAGGGAATCATCTTCGTCTCCTACAACTACCGCAA
CGGTGTATTCGGCTTCATGGCACACCCCGAGTTGACCGAGACTAACGGTC
GCAACGCCTCGGGCAACTGGGGTGTCCTCGACCAGTATGCGGCGGTCAAA
TGGGTCCACGAGAACATTGCGGCCTTTGGCGGTGACCCAGATCACATTTC
CGTGATCGGCCAGTCTTTCGGCGCTGCGGCCACATACCACATCGTCAACA
GCGAGTTGACTGCCGATCTGGGCATTGTCAACGCTATCTCGGAGTCCGGT
GTCCGCTCTCCCAATGATCCCAACACTGGTGTCTTCGAGTGCGCTTACAC
TACCTTGGATGATGCTGAGACCATGGGTGAGGAGATCGTGAACTCCCTGA
ACGTCAGCTCCATTGCCGGAGCGCGCGCCATTGACACCACCACCCTGCTT
GACTCGACCAGCACCTACAGCCTGGAGGTGAAGCCTGTTCTCGACTACTA
CGCCATCCCATCCAAGTACATCAACACCCTCGAGAAGGGTGCCGGCAACA
AGGTTCCCTACATCACCGGAAACAACGCCAACGAGGACGGAGCCTCCGCC
ACCGTCAGCACCACCGTTGCGGCATACAAGTCTAGCTTGAATTCCAGCTA
CGGCGACTTCGCCCCCCGGTTTTGGGCCCTCTACCCTGCTGATAATGACA
CCCAGGCTGGCGAACAAGAGGACCAGATCGTCCGTGACATGTTCCGCGTC
AGCAGCTGGCAGTACATGAACGGCTTCTCCAACTCTGCCGACCAGGTCGA
CACCTACACCTACTACTGGAACTATGGCAGCGCTGCCCATGCCTCTGAGA
TTGTCTACGTCTTGAACAACCTGTGGGCCCAGGGTGAGGACTACTCCGAG
GAGGATTACTATGTTGCCAATGTCATGAGCAGCTACTGGGCCAACTTCAT
GAAGACTGGCAACCCTAACACTGGCGGCTCCTATGACAACGGAACCCTCC
CCGCCAAGTGGAATGCCAACTCACCTTCCAAGAACGAGACTTTCTTGGCC
GGTGCTGTCTACGAGACCATGGATACCGCTGCCACTGAGCGTGTCCAGTT
GATCCTGGATTACTTTGCTGCCCAGACTCCTTACTAG back to topCoding sequence (CDS) from alignment at An12:597692..599278+ >CBS51388_007585-T1 ID=CBS51388_007585-T1|Name=CBS51388_007585-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1587bp|location=Sequence derived from alignment at An12:597692..599278+ (Aspergillus niger CBS 513.88)
ATGCTTCCTAAACTCGCAACCTTAGTCCTCGCACCCGCCTTAGCGAATGG
CGTTGCTGCCGCTGCCGAGCCCTTGTATAAAAAGCCGGTTAACATCCCCG
GTTACGGCTACGTGCAAGGAAAGGCTGCTGTCAACTCCAGCGTGTCCGAG
TACATTTCCAACTGGGAGAACATTTCCTTCTTTGGAGGTATTCCTTTCGG
TGCTGATACCTCTGGCGCAAACCGTTGGCGCGACCCCCAGCCTGTCGAGC
CCTGGAATGGCACTCTCAATGCGACTGAATTCGGTGCTATCTGCCCTATT
ACTCTCTCTGTCCTGGCAGATTACGCCCAGAGTGAGGATTGTCTGAACCT
CAACATCTGGACTCCCGCTACTTCGGCCGATGAGAAGCTTCCCGTGGCCA
TCTGGAGTTATGGGGCCGGAACGGCGCCGCCGCAGACCACCTACAACGGT
GCGGGTGTGGCCGACAAGGGAATCATCTTCGTCTCCTACAACTACCGCAA
CGGTGTATTCGGCTTCATGGCACACCCCGAGTTGACCGAGACTAACGGTC
GCAACGCCTCGGGCAACTGGGGTGTCCTCGACCAGTATGCGGCGGTCAAA
TGGGTCCACGAGAACATTGCGGCCTTTGGCGGTGACCCAGATCACATTTC
CGTGATCGGCCAGTCTTTCGGCGCTGCGGCCACATACCACATCGTCAACA
GCGAGTTGACTGCCGATCTGGGCATTGTCAACGCTATCTCGGAGTCCGGT
GTCCGCTCTCCCAATGATCCCAACACTGGTGTCTTCGAGTGCGCTTACAC
TACCTTGGATGATGCTGAGACCATGGGTGAGGAGATCGTGAACTCCCTGA
ACGTCAGCTCCATTGCCGGAGCGCGCGCCATTGACACCACCACCCTGCTT
GACTCGACCAGCACCTACAGCCTGGAGGTGAAGCCTGTTCTCGACTACTA
CGCCATCCCATCCAAGTACATCAACACCCTCGAGAAGGGTGCCGGCAACA
AGGTTCCCTACATCACCGGAAACAACGCCAACGAGGACGGAGCCTCCGCC
ACCGTCAGCACCACCGTTGCGGCATACAAGTCTAGCTTGAATTCCAGCTA
CGGCGACTTCGCCCCCCGGTTTTGGGCCCTCTACCCTGCTGATAATGACA
CCCAGGCTGGCGAACAAGAGGACCAGATCGTCCGTGACATGTTCCGCGTC
AGCAGCTGGCAGTACATGAACGGCTTCTCCAACTCTGCCGACCAGGTCGA
CACCTACACCTACTACTGGAACTATGGCAGCGCTGCCCATGCCTCTGAGA
TTGTCTACGTCTTGAACAACCTGTGGGCCCAGGGTGAGGACTACTCCGAG
GAGGATTACTATGTTGCCAATGTCATGAGCAGCTACTGGGCCAACTTCAT
GAAGACTGGCAACCCTAACACTGGCGGCTCCTATGACAACGGAACCCTCC
CCGCCAAGTGGAATGCCAACTCACCTTCCAAGAACGAGACTTTCTTGGCC
GGTGCTGTCTACGAGACCATGGATACCGCTGCCACTGAGCGTGTCCAGTT
GATCCTGGATTACTTTGCTGCCCAGACTCCTTACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | MEROPS:MER0034723 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002018 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:597692..599278 + |
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