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CBS51388_007591-T1, CBS51388_007591-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007591-T1
Unique NameCBS51388_007591-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:611133..612913-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007591-T1 ID=CBS51388_007591-T1|Name=CBS51388_007591-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1781bp|location=Sequence derived from alignment at An12:611133..612913- (Aspergillus niger CBS 513.88)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGGTACTACACGAAGCATATGCTGTGCTTCCATCCTATACG
CTTCAGACCAATCATTCTGATTATATCGCCAGTGCGATGAAGCCAGACCG
AAATGCTCACGTTGCACCAGACTCTCGTACACATGTCAATATCAACACCG
TCCGAATACCAGCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGG
AGATTGAATTCGCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGAT
CGTCCATCGGGTCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCC
ACAATCAAATGGCGAGGAAGATATACCCGGCTTAGACCTACCCTCCCCGG
ATCCTCTCAACGCGACCGAACTCAATCTCCTAGCTCATTACCTCTCGCAC
ACTAGCCAAACGATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGT
CGGAGTACCTAATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGC
TAAGCCTGGCAGCAGCATGCAAATGCCACGACATAGCAAATGAGAACACC
CAAAGACCCCTCGACACACGGACCTTAACAGAGATCAATGACCTCCTTGC
GTTAGCCGAACGCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGA
TGCAAATAACCGAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATG
GTCTTGTACGCATCGGCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCAC
AGCTGAGAAATATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATT
CGCAGTGGATTTCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATA
CTCCATGATATTGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATAC
GGGATCAGAGTCCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCG
GTCCATCTCCGAAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACC
TGTAATCGAGCTCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGC
AGAGCAGCGTTCCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTC
ACGCATTACTGGAAACCATAAATATCCTGGAGAGCTGTGCATCAGCAGCG
CTATCGCCAGGGGCAAGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCC
AAATACTCAGCACACCTCGATGTTTGGATGTCCCCGTGGTGTCTCACCAT
GGGTGGCTCGATACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATT
CTCCGACGTATCATTATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCT
CAACATTGTGCGATCGGTATTGGATTCTCCTACTGTAGAAGCTAGGAACG
AGAGTACAACACTACCGGCTTCATCCGCAACCAGGGAGCCATTAATGGTC
ACTCCGATACATATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTT
GGTCATGTTATTGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGG
AGCTCAGCCAAGTCATCTCTTTGATGAAAACACAGAATGTCCTCTCCCAG
TTGGCTGACAGTAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAA
GCGAGAGCTCACGCCCGATTCCTGGCATTAA
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Coding sequence (CDS) from alignment at An12:611133..612913-

>CBS51388_007591-T1 ID=CBS51388_007591-T1|Name=CBS51388_007591-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3420bp|location=Sequence derived from alignment at An12:611133..612913- (Aspergillus niger CBS 513.88)
TGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGACTCTCGTACAC
ATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGACACAGAGCCGA
CGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGAACTGACATCG
AGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTCCCTCCATTGG
TCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGATATACCCGGCT
TAGACCTACCCTCCCCGGATCCTCTCAACGCGACCGAACTCAATCTCCTA
GCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCGATTCTCTCGA
TCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTCAAATGCAAGG
CTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAAATGCCACGAC
ATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGACCTTAACAGA
GATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCGGCATCTCTCC
GCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGATAACGTCCTC
GCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCCACTCCATTCG
TGTCCGTCTGGCAGCCACAGCTGAGAAATATGGACAGAGGCTGCCGAAAG
AATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACACGCGCAGCGCAT
ACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCTACTCCTTCCAG
CAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAACAACATCAAGTC
CTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGAGCTTATTCCTC
CCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAATCTTCGTAGGAG
AGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTTATGTAGCGCGA
TTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAAATATCCTGGAG
AGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGTTAAGAAGAAGGT
TGTGTTCACAGCGTCTCCAAATACTCAGCACACCTCGATGTTTGGATGTC
CCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAGTGTCACGTCT
ATGGAGGCACCGCAAATTCTCCGACGTATCATTATGTCTTTTTTGAACAA
GGCTCCGACCGAGTTTCTCAACATTGTGCGATCGGTATTGGATTCTCCTA
CTGTAGAAGCTAGGAACGAGAGTACAACACTACCGGCTTCATCCGCAACC
AGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTATGGATATATT
CGCTCATTGGCTGGTTTTGGTCATGTTATTGGATGGGGTGTGGTGGATCA
GTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTTGATGAAAACA
CAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGTGGTGGCCCGA
GAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCCTGGCATTAAA
TGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTG
CGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGTT
ACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGAC
TCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGAC
ACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGA
ACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTC
CCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGAT
ATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGACCGAACT
CAATCTCCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCG
ATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTC
AAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAA
ATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGA
CCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCG
GCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACGA
TAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCC
ACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGGACAGAGG
CTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACACG
CGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCTA
CTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAACA
ACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGAG
CTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAATC
TTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTTA
TGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAAA
TATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGTTA
AGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACCTCGATG
TTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCAG
TGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATTATGTCTT
TTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATCGGTATTG
GATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTACCGGCTTC
ATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCTA
TGGATATATTCGCTCATTGGCTGGTTTTGGTCATGTTATTGGATGGGGTG
TGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTTT
GATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATGT
GGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTCC
TGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGG
ATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGAT
GCAAGCAGTTACGCAAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007591CBS51388_007591Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007591-T1CBS51388_007591-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007591-T1.cdsCBS51388_007591-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007591-T1.exon2CBS51388_007591-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007591-T1.exon1CBS51388_007591-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:611133..612913 -
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