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CBS51388_007610-T1, CBS51388_007610-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007610-T1
Unique NameCBS51388_007610-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:663704..665443-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007610-T1 ID=CBS51388_007610-T1|Name=CBS51388_007610-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1740bp|location=Sequence derived from alignment at An12:663704..665443- (Aspergillus niger CBS 513.88)
ATGAATGTCGCCCTTGTGCAGCAGTTCATCTGTGATGTAAGCTTGCCTAC
TACCGTTGCGTGAACAACATCCATCTTACCCACGGTCGGTTATTGGTCCA
GCCGATACTATCGGAATGGTCCGCCACGGGAGGTTGTCGAGAGGCTGCCA
GGTCTGTAGGAAGAGAAAAATCAAGGTACAGTTAGACTCACTTTGTTGAA
AGCTTTTACAATTCAATCCTTGTATATTTCGCATCGACGCTTATTTTATG
AACTACAATAGTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAG
TCCGGGTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGT
CCATCATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTA
GCTCCTCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAA
GTAAATCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCA
ATCTGCGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCC
AGAACATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCG
ATCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGC
ACTGGCAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAG
CTAGACAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTA
TCTCGCCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCT
GAACACCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAA
GAGAGACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCAAGGAGTG
GAGCTTGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCT
TTGCATCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGAC
TGGTCAAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCT
GCGTGGAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACT
GGTCAAAGACCGTACGCTCTGCGATCCGGAGACTATAATCGCATCTGCTA
AGTATATAGATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGAC
TGGCAATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGG
AACGCAGTATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAACA
ACATCCGTACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTTG
GAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTC
CGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTC
AATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCG
CAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAA
TGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTAT
CTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGAT
CGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATT
TGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAA
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Coding sequence (CDS) from alignment at An12:663704..665443-

>CBS51388_007610-T1 ID=CBS51388_007610-T1|Name=CBS51388_007610-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3030bp|location=Sequence derived from alignment at An12:663704..665443- (Aspergillus niger CBS 513.88)
TGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAA
GTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTCCATCATATCC
CAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCG
GGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAG
CCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTGCGGAAT
CCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCAGAACATTGGT
CTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGATCGATGTCAT
GGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTT
ATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTAT
TACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTATCTCGCCGTGA
AGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTGAACACCTTTG
AGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCAC
TTGAGGGGGGTAGCATCCATATTGGAATTCCAAGGAGTGGAGCTTGTCCA
ATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCATCTCGG
TGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTT
CACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTGGAAATT
GTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTGGTCAAAGACC
GTACGCTCTGCGATCCGGAGACTATAATCGCATCTGCTAAGTATATAGAT
CGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCAATTTCA
AGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGCAGTATC
ACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAACAACATCCGTACA
TGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTTGGAGAATGTCCT
GGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAA
TGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGC
TATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTC
GGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCG
CTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAG
ATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATA
TATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATAC
TGAAACGGGCTGTGGACCCTTTTCAATAAATGAATGTCGCCCTTGTGCAG
CAGTTCATCTGTGATTGCGACCGGGCGCGACCGCATTGCAACCAATGCCT
CAAGTCCGGGTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGT
TTGTCCATCATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCG
ACTAGCTCCTCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCT
CCAAGTAAATCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAG
TCCAATCTGCGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACC
TTCCAGAACATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATT
CCCGATCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCG
TTGCACTGGCAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAA
AAAGCTAGACAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTT
GTTATCTCGCCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTAT
TTCTGAACACCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTAT
CAAAGAGAGACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCAAGG
AGTGGAGCTTGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTC
TTCTTTGCATCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATG
GGACTGGTCAAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGA
TCCTGCGTGGAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAG
CACTGGTCAAAGACCGTACGCTCTGCGATCCGGAGACTATAATCGCATCT
GCTAAGTATATAGATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAA
AGACTGGCAATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCA
TGGGAACGCAGTATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGG
AACAACATCCGTACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCA
GTTGGAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGC
AGTCCGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTG
CCTCAATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACAC
GCCGCAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCA
GCAATGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTT
CTATCTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAAT
TGATCGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTG
TATTTGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAAATGAAT
GTCGCCCTTGTGCAGCAGTTCATCTGTGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007610CBS51388_007610Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007610-T1CBS51388_007610-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007610-T1.cdsCBS51388_007610-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007610-T1.exon2CBS51388_007610-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007610-T1.exon1CBS51388_007610-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_12.3
DBxrefInterPro:IPR001138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:663704..665443 -
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