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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:666008..667215+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007611-T1 ID=CBS51388_007611-T1|Name=CBS51388_007611-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1208bp|location=Sequence derived from alignment at An12:666008..667215+ (Aspergillus niger CBS 513.88)
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGTAGGTCATACCTGATT
GGAGTCGCTGTACAAAACCACTGATAGATAATGACAATAGGCCGACCTTG
AAGACAAAGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTC
GCCGTTACCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACA
AGGCATGAACGTAGCTGATGTTGCTAAGGTAAGACATACTAGCAGCATTG
TGGAGATATACTAACATCAGCAGGAGCTGGATGTCAAACATCTTATTTGG
AGTAGCTTGCCCGGTATCTCGCGGAGTAAGTCTTTTTTCCCTTTAGTCTA
CTGCGCCACATTCGTTGTTGTCAGCTGAGACTAACAAACAAATAGTCACC
AATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGTTGA
CGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTGCCA
TCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCACCT
CCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAACGGT
ACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCATCC
TTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGGAAG
GAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGTGGA
TATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAGGGCTGGAATGGCTG
CCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCTCAG
TATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAGCCA
CAAAGTAGGTAACTCAGAGGATCTTGATTCTGGACAGTACTGACTGCTAA
TTCGCATTGTAATAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAAC
ACTGAGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAA
CTAAATAA back to topCoding sequence (CDS) from alignment at An12:666008..667215+ >CBS51388_007611-T1 ID=CBS51388_007611-T1|Name=CBS51388_007611-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4875bp|location=Sequence derived from alignment at An12:666008..667215+ (Aspergillus niger CBS 513.88)
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAGGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTTTTGTTGGATCCCTTG
ACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGTTGAA
AAATGGGGTGGATGTAACTAAATAAATGTCCCAAGAAAAGAAGCTCTTCG
TTGTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGCGATT
CTGGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCACCAG
AGACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGC
TGATGAAGGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAA
GATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGATGC
TGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGGAGC
TGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGTATCTCGCGGATC
ACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGT
TGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTG
CCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCA
CCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAAC
GGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCA
TCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGG
AAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGT
GGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAGGGCTGGAATGG
CTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCT
CAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAG
CCACAAAGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTGAGGA
ACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAAATAA
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAGGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTTTTGTTGGATCCCTTG
ACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGTTGAA
AAATGGGGTGGATGTAACTAAATAAATGTCCCAAGAAAAGAAGCTCTTCG
TTGTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGCGATT
CTGGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCACCAG
AGACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGC
TGATGAAGGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAA
GATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGATGC
TGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGGAGC
TGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGTATCTCGCGGATC
ACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGT
TGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTG
CCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCA
CCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAAC
GGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCA
TCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGG
AAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGT
GGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAGGGCTGGAATGG
CTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCT
CAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAG
CCACAAAGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTGAGGA
ACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAAATAA
ATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCA
AGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAAC
AGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGA
AGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGCCGACCTTGAAGACAA
AGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTA
CCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATG
AACGTAGCTGATGTTGCTAAGGAGCTGGATGTCAAACATCTTATTTGGAG
TAGCTTGCCCGGTATCTCGCGGATCACCAATGATAGACTCACCGGAGTGG
TGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCA
ATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGA
GATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCC
CCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCT
GACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCT
GGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCG
TCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGAT
AAGGAGACCTTCAGGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCAT
TTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATT
TCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGTTTTGTTGGATCCCTTG
ACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGTTGAA
AAATGGGGTGGATGTAACTAAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.3 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:666008..667215 + |
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