|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:691662..692576+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007618-T1 ID=CBS51388_007618-T1|Name=CBS51388_007618-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=915bp|location=Sequence derived from alignment at An12:691662..692576+ (Aspergillus niger CBS 513.88)
ATGCGCATTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCA
ATATCAGTTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTC
ATATGCTGTCCGGCGAGATTGAATGCCCGCCCGCACCTGGTTTGCCATTC
CCTTCTACAGGACACTATTGAATGAGGGAGATCTAACCACTATTGTTTGA
CTTGCTCGAAGGCATCGAAACCAACTTCACTCCCCCATATTACTGCTGGT
CACGCACGTTTAGCGCACCATCTATCGAGAATGCTCATTCTCTAATCGCC
GAAGCGATTGAGGATGAGGGCCCCTTTGACGGTATCTTAGGATTCAGTCA
GGGGGCCTCGATCATTGCCTCCTTCCTCCTCGAACAGACCGCCAACCACC
CGGAAAAGCCGCTCCCATTCCGGTTTGCTATCTTCTGCTCGACAACCATT
CCCTGCTCATCGGATCCCAACTACTGCCGCTCTATAACGGGAGGCCTGTC
TCTGCAAGATCAGCAGCGGATCCGTTCTGGGCAGGATGATCAAATTGCAC
AATTGCCCGCATCTATCAAGGCACCATTTGAAGAATTTGCCAAGGTGGTC
AAGGCAGGCCTGTCAATTACTCGTGAACCAGTCAGCTTCTTTCTAGACCG
GTCTATCGAAGAAATCCCCTGTGCCTTGCACCCGGACCATTTTCCGGGCC
GCCTCTCAATCCCTACATTGCACCTGCGGGGCCATAATGACCTCCCTGGA
TTGTCCGATTGTGCCTCGCTAGTGGAGAAGTTCTGCAACCCCAGGTGTCG
TAAGACCATTGTCCATACTGCCGGACATGATATTCCGAGAAGTGGGTCGG
AGTTGAGGCAATTTAGGGCCGGGTTAGATTGGCTAGTTGCCCAGAGCCAG
TTGCCAACACAGTAA back to topCoding sequence (CDS) from alignment at An12:691662..692576+ >CBS51388_007618-T1 ID=CBS51388_007618-T1|Name=CBS51388_007618-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1686bp|location=Sequence derived from alignment at An12:691662..692576+ (Aspergillus niger CBS 513.88)
ATGCGCATTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCA
ATATCAGTTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTC
ATATGCTGTCCGGCGAGATTGAATGCCCGCCCGCACCTGGCATCGAAACC
AACTTCACTCCCCCATATTACTGCTGGTCACGCACGTTTAGCGCACCATC
TATCGAGAATGCTCATTCTCTAATCGCCGAAGCGATTGAGGATGAGGGCC
CCTTTGACGGTATCTTAGGATTCAGTCAGGGGGCCTCGATCATTGCCTCC
TTCCTCCTCGAACAGACCGCCAACCACCCGGAAAAGCCGCTCCCATTCCG
GTTTGCTATCTTCTGCTCGACAACCATTCCCTGCTCATCGGATCCCAACT
ACTGCCGCTCTATAACGGGAGGCCTGTCTCTGCAAGATCAGCAGCGGATC
CGTTCTGGGCAGGATGATCAAATTGCACAATTGCCCGCATCTATCAAGGC
ACCATTTGAAGAATTTGCCAAGGTGGTCAAGGCAGGCCTGTCAATTACTC
GTGAACCAGTCAGCTTCTTTCTAGACCGGTCTATCGAAGAAATCCCCTGT
GCCTTGCACCCGGACCATTTTCCGGGCCGCCTCTCAATCCCTACATTGCA
CCTGCGGGGCCATAATGACCTCCCTGGATTGTCCGATTGTGCCTCGCTAG
TGGAGAAGTTCTGCAACCCCAGGTGTCGTAAGACCATTGTCCATACTGCC
GGACATGATATTCCGAGAAGTGGGTCGGAGTTGAGGCAATTTAGGGCCGG
GTTAGATTGGCTAGTTGCCCAGAGCCAGTTGCCAACACAGTAAATGCGCA
TTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCAATATCAG
TTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTCATATGCT
GTCCGGCGAGATTGAATGCCCGCCCGCACCTGGCATCGAAACCAACTTCA
CTCCCCCATATTACTGCTGGTCACGCACGTTTAGCGCACCATCTATCGAG
AATGCTCATTCTCTAATCGCCGAAGCGATTGAGGATGAGGGCCCCTTTGA
CGGTATCTTAGGATTCAGTCAGGGGGCCTCGATCATTGCCTCCTTCCTCC
TCGAACAGACCGCCAACCACCCGGAAAAGCCGCTCCCATTCCGGTTTGCT
ATCTTCTGCTCGACAACCATTCCCTGCTCATCGGATCCCAACTACTGCCG
CTCTATAACGGGAGGCCTGTCTCTGCAAGATCAGCAGCGGATCCGTTCTG
GGCAGGATGATCAAATTGCACAATTGCCCGCATCTATCAAGGCACCATTT
GAAGAATTTGCCAAGGTGGTCAAGGCAGGCCTGTCAATTACTCGTGAACC
AGTCAGCTTCTTTCTAGACCGGTCTATCGAAGAAATCCCCTGTGCCTTGC
ACCCGGACCATTTTCCGGGCCGCCTCTCAATCCCTACATTGCACCTGCGG
GGCCATAATGACCTCCCTGGATTGTCCGATTGTGCCTCGCTAGTGGAGAA
GTTCTGCAACCCCAGGTGTCGTAAGACCATTGTCCATACTGCCGGACATG
ATATTCCGAGAAGTGGGTCGGAGTTGAGGCAATTTAGGGCCGGGTTAGAT
TGGCTAGTTGCCCAGAGCCAGTTGCCAACACAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.3 |
| Note | antiSMASH:Cluster_12.4 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR005645 |
| DBxref | PFAM:PF03959 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:691662..692576 + |
|
