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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:708901..709542+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007624-T1 ID=CBS51388_007624-T1|Name=CBS51388_007624-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=642bp|location=Sequence derived from alignment at An12:708901..709542+ (Aspergillus niger CBS 513.88)
ATGGTTGTCAAGGGTTCTTGTAACTGCGGCCGCATCCGCATCACCATGGA
CAATCCCACACCGTCTGGGGGTGGCGTGATGATCTGCTACTGCCTCAATT
GTCGAAAGCAGAGTGGTGCCGGTATTTACCACCTCCTCTCTTCTTCGTGT
TTACTTCCTAGCCCAACATTGCCTAAGTAACATTCCTCTAGCCGGCACCT
ATGTCGTCGTGGTGGAGAACAAAGACATGGTCTTGAACGGTCGTCCCAAG
AAATTTCTCGACACCAACACCGCCTGTGGCCGACCACTGGATCGATACTT
CTGTTATAACTGTGGATGGTCAGTACATGCAATGGGAGCCTTGTGTTTCG
AATCTGGCTAATCTCTTTGTAGTCCGATCATGTACCAAAGTGAGACTGTT
TTGCCCGGGAAATCACGTCAGTTCACTCTCCATCCTCTCCCCCCTTTGTA
AGAGTTCCGGGAGTGAAATTAACAAGAACAGTCTTAATGTTTGGTCTCTT
TGATGATATTCCCAAGCCGGTGGCAGAGGTGTGGACTAAGCGTCGGCCGG
AGTGGATGGTAGAGATTCCAGATGTTTTACAGTATGTTACGGATATCCCA
GACGACGTGAGCGGAGAGGAGGCCAAGAAACTAGGCTGGTGA back to topCoding sequence (CDS) from alignment at An12:708901..709542+ >CBS51388_007624-T1 ID=CBS51388_007624-T1|Name=CBS51388_007624-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1812bp|location=Sequence derived from alignment at An12:708901..709542+ (Aspergillus niger CBS 513.88)
ATGGTTGTCAAGGGTTCTTGTAACTGCGGCCGCATCCGCATCACCATGGA
CAATCCCACACCGTCTGGGGGTGGCGTGATGATCTGCTACTGCCTCAATT
GTCGAAAGCAGAGTGGTGCCGCCGGCACCTATGTCGTCGTGGTGGAGAAC
AAAGACATGGTCTTGAACGGTCGTCCCAAGAAATTTCTCGACACCAACAC
CGCCTGTGGCCGACCACTGGATCGATACTTCTGTTATAACTGTGGATGTC
CGATCATGTACCAAAGTGAGACTGTTTTGCCCGGGAAATCACTCTTAATG
TTTGGTCTCTTTGATGATATTCCCAAGCCGGTGGCAGAGGTGTGGACTAA
GCGTCGGCCGGAGTGGATGGTAGAGATTCCAGATGTTTTACAGTATGTTA
CGGATATCCCAGACGACGTGAGCGGAGAGGAGGCCAAGAAACTAGGCTGG
TGAATGGTTGTCAAGGGTTCTTGTAACTGCGGCCGCATCCGCATCACCAT
GGACAATCCCACACCGTCTGGGGGTGGCGTGATGATCTGCTACTGCCTCA
ATTGTCGAAAGCAGAGTGGTGCCGCCGGCACCTATGTCGTCGTGGTGGAG
AACAAAGACATGGTCTTGAACGGTCGTCCCAAGAAATTTCTCGACACCAA
CACCGCCTGTGGCCGACCACTGGATCGATACTTCTGTTATAACTGTGGAT
GTCCGATCATGTACCAAAGTGAGACTGTTTTGCCCGGGAAATCACTCTTA
ATGTTTGGTCTCTTTGATGATATTCCCAAGCCGGTGGCAGAGGTGTGGAC
TAAGCGTCGGCCGGAGTGGATGGTAGAGATTCCAGATGTTTTACAGTATG
TTACGGATATCCCAGACGACGTGAGCGGAGAGGAGGCCAAGAAACTAGGC
TGGTGAATGGTTGTCAAGGGTTCTTGTAACTGCGGCCGCATCCGCATCAC
CATGGACAATCCCACACCGTCTGGGGGTGGCGTGATGATCTGCTACTGCC
TCAATTGTCGAAAGCAGAGTGGTGCCGCCGGCACCTATGTCGTCGTGGTG
GAGAACAAAGACATGGTCTTGAACGGTCGTCCCAAGAAATTTCTCGACAC
CAACACCGCCTGTGGCCGACCACTGGATCGATACTTCTGTTATAACTGTG
GATGTCCGATCATGTACCAAAGTGAGACTGTTTTGCCCGGGAAATCACTC
TTAATGTTTGGTCTCTTTGATGATATTCCCAAGCCGGTGGCAGAGGTGTG
GACTAAGCGTCGGCCGGAGTGGATGGTAGAGATTCCAGATGTTTTACAGT
ATGTTACGGATATCCCAGACGACGTGAGCGGAGAGGAGGCCAAGAAACTA
GGCTGGTGAATGGTTGTCAAGGGTTCTTGTAACTGCGGCCGCATCCGCAT
CACCATGGACAATCCCACACCGTCTGGGGGTGGCGTGATGATCTGCTACT
GCCTCAATTGTCGAAAGCAGAGTGGTGCCGCCGGCACCTATGTCGTCGTG
GTGGAGAACAAAGACATGGTCTTGAACGGTCGTCCCAAGAAATTTCTCGA
CACCAACACCGCCTGTGGCCGACCACTGGATCGATACTTCTGTTATAACT
GTGGATGTCCGATCATGTACCAAAGTGAGACTGTTTTGCCCGGGAAATCA
CTCTTAATGTTTGGTCTCTTTGATGATATTCCCAAGCCGGTGGCAGAGGT
GTGGACTAAGCGTCGGCCGGAGTGGATGGTAGAGATTCCAGATGTTTTAC
AGTATGTTACGGATATCCCAGACGACGTGAGCGGAGAGGAGGCCAAGAAA
CTAGGCTGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016846 | carbon-sulfur lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.3 |
| Note | antiSMASH:Cluster_12.4 |
| DBxref | InterPro:IPR011057 |
| DBxref | InterPro:IPR006913 |
| DBxref | PFAM:PF04828 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:708901..709542 + |
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