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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:810220..811966+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007657-T1 ID=CBS51388_007657-T1|Name=CBS51388_007657-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1747bp|location=Sequence derived from alignment at An12:810220..811966+ (Aspergillus niger CBS 513.88)
ATGTCCATCGGCTCGGAAGATGACACATCCCCAAGCGTTCTACCCCGCGG
CATCGAGTCTCCTCTGCCAGCAGCACAGGGCGTAGCTCAGACTATTTTGA
GAGGGCTAAAGGACGAAAATACTAGGTCTCTTCTCAGTTCCAATGTGTTT
TGTCACCTCAAGACCGTGGAGTCTCGCTTCTGGGGGAACGAGAAGTGCAT
CCAGGCCATAGAGGTTGCCATGCGAGAGATCTCGCAGTTGGAGAACGTAG
AAACCCCAAAGCCTAAGGCTTCCCCTGTCATCACAAAAGAAACAGCACAC
AAATGGATAGAATGTACAGTCCGTCCACAATACGTGGATATTCAACATTA
AGCTAATCTGGACCCAAGTATATTATGAGGCGTACCAATTCGAGGGTTTC
CGAATTCCTTTTGAAAGAAATTTCATCCTCTCCCTCCCAGATCTCCTTCA
CAACCCACATGTTCAACTCGACCCAACAATACGAATTGTGTATTACAACG
TCCTCTTTCAAGGGTTTTTGGTGGACCCGGACCCCTATCCTAACAGAGGC
GCCATCGTGGAATTCCTTTGCCACTCCTGTATGGAGCTAACGGAAAGCTG
GCTAGCCCAGATTAAGAATACCCCGGCTGACTTGTTCGCTGCCTTCTTTA
TGGTACGTTCTGGCTTCGACGCCCAGCAAATGCAATAGAAACTAAAGTGA
CGCTTAGATGTCCATGTCTCTTGAAGCTTGCAACAGTGAACTGTCCTGGA
GGATTGTGGCCCATGCTTGTACTATTGCTCGGGCTCTTGGATATTTCTCT
GTTGATGCCGACCAACCAACACCCAGTCAGCAGATTTTGCGGCCAGGCGG
TCCCCCTGATCCTGAAAGTCAGATTGAGAAGAACAGGATGCGCTTTGAAT
TTTGGCACTTACTACGAACGGACTGCGTATTCCGCTTGTCCTTTGGTAAA
CCAGCGCTCATTGCCGACGGGTCTTGGACGGTAAATTTTCCGGATCCGAG
TATCACTGGAGTTGATCACGCATCCACCCGGTTCATACAAATCCATTTCT
TTGCTTCCATGCGTCTCACGTTGGTTCTGATAAAATATTTGGACATGGTC
GATGCGGAACCCGACGTGGACACACCCGAGTACGATAGGACAATAGATGG
TCTCATTGCCGAGGTCCAAACCATCATGTCCGACTGGTCGCCGGTACGTT
AATCTTTAAGGTTCATCTTTACTCACCCGGAAGCTAACAGAACCAAGGAG
GAACTCCTGACTACGACTACGAACCGCATGGATACCTGGTTTTGCGTGGA
CATCCTATTCAGCAGCTACAAAATGCTCATCGTTTTCTACCAAGCGAAGA
AATGTAACCAAGATAGCCAATTCCTACCATATCACACGGTCGACATTGCA
CGGAAGAGCCTTCATATGTCCCGGTCCCTCATGTCGTCCTCTACACACCC
ATATTGGGGTATCAGGTATGTTGCAACGCGAGATTCTCCACATCATGATG
CTGATTGTTGCATTCTTCTATTTACAGTCTCATCCTTCTCCATCAGTTTG
TTCCATTATTTATTGTCTCCATGAATATGATCGGATCTCCGGAGTGTGGA
AATGCCGAAGCCGATCTCGGTCTAGTGTCTTGGTTTAACCAATTCGTCGA
GACGGCGGCCCAGGAGCGAGGGGAGCTCAAACCATTGAGTATCATAATGA
AGGCAATGGCTATAGCCTCTCAACACTCGGTGACAGGCTCACATTGA back to topCoding sequence (CDS) from alignment at An12:810220..811966+ >CBS51388_007657-T1 ID=CBS51388_007657-T1|Name=CBS51388_007657-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7605bp|location=Sequence derived from alignment at An12:810220..811966+ (Aspergillus niger CBS 513.88)
ATGTCCATCGGCTCGGAAGATGACACATCCCCAAGCGTTCTACCCCGCGG
CATCGAGTCTCCTCTGCCAGCAGCACAGGGCGTAGCTCAGACTATTTTGA
GAGGGCTAAAGGACGAAAATACTAGGTCTCTTCTCAGTTCCAATGTGTTT
TGTCACCTCAAGACCGTGGAGTCTCGCTTCTGGGGGAACGAGAAGTGCAT
CCAGGCCATAGAGGTTGCCATGCGAGAGATCTCGCAGTTGGAGAACGTAG
AAACCCCAAAGCCTAAGGCTTCCCCTGTCATCACAAAAGAAACAGCACAC
AAATGGATAGAATTATATTATGAGGCGTACCAATTCGAGGGTTTCCGAAT
TCCTTTTGAAAGAAATTTCATCCTCTCCCTCCCAGATCTCCTTCACAACC
CACATGTTCAACTCGACCCAACAATACGAATTGTGTATTACAACGTCCTC
TTTCAAGGGTTTTTGGTGGACCCGGACCCCTATCCTAACAGAGGCGCCAT
CGTGGAATTCCTTTGCCACTCCTGTATGGAGCTAACGGAAAGCTGGCTAG
CCCAGATTAAGAATACCCCGGCTGACTTGTTCGCTGCCTTCTTTATGATG
TCCATGTCTCTTGAAGCTTGCAACAGTGAACTGTCCTGGAGGATTGTGGC
CCATGCTTGTACTATTGCTCGGGCTCTTGGATATTTCTCTGTTGATGCCG
ACCAACCAACACCCAGTCAGCAGATTTTGCGGCCAGGCGGTCCCCCTGAT
CCTGAAAGTCAGATTGAGAAGAACAGGATGCGCTTTGAATTTTGGCACTT
ACTACGAACGGACTGCGTATTCCGCTTGTCCTTTGGTAAACCAGCGCTCA
TTGCCGACGGGTCTTGGACGGTAAATTTTCCGGATCCGAGTATCACTGGA
GTTGATCACGCATCCACCCGGTTCATACAAATCCATTTCTTTGCTTCCAT
GCGTCTCACGTTGGTTCTGATAAAATATTTGGACATGGTCGATGCGGAAC
CCGACGTGGACACACCCGAGTACGATAGGACAATAGATGGTCTCATTGCC
GAGGTCCAAACCATCATGTCCGACTGGTCGCCGGAGGAACTCCTGACTAC
GACTACGAACCGCATGGATACCTGGTTTTGCGTGGACATCCTATTCAGCA
GCTACAAAATGCTCATCGTTTTCTACCAAGCGAAGAAATGTAACCAAGAT
AGCCAATTCCTACCATATCACACGGTCGACATTGCACGGAAGAGCCTTCA
TATGTCCCGGTCCCTCATGTCGTCCTCTACACACCCATATTGGGGTATCA
GTCTCATCCTTCTCCATCAGTTTGTTCCATTATTTATTGTCTCCATGAAT
ATGATCGGATCTCCGGAGTGTGGAAATGCCGAAGCCGATCTCGGTCTAGT
GTCTTGGTTTAACCAATTCGTCGAGACGGCGGCCCAGGAGCGAGGGGAGC
TCAAACCATTGAGTATCATAATGAAGGCAATGGCTATAGCCTCTCAACAC
TCGGTGACAGGCTCACATTGAATGTCCATCGGCTCGGAAGATGACACATC
CCCAAGCGTTCTACCCCGCGGCATCGAGTCTCCTCTGCCAGCAGCACAGG
GCGTAGCTCAGACTATTTTGAGAGGGCTAAAGGACGAAAATACTAGGTCT
CTTCTCAGTTCCAATGTGTTTTGTCACCTCAAGACCGTGGAGTCTCGCTT
CTGGGGGAACGAGAAGTGCATCCAGGCCATAGAGGTTGCCATGCGAGAGA
TCTCGCAGTTGGAGAACGTAGAAACCCCAAAGCCTAAGGCTTCCCCTGTC
ATCACAAAAGAAACAGCACACAAATGGATAGAATTATATTATGAGGCGTA
CCAATTCGAGGGTTTCCGAATTCCTTTTGAAAGAAATTTCATCCTCTCCC
TCCCAGATCTCCTTCACAACCCACATGTTCAACTCGACCCAACAATACGA
ATTGTGTATTACAACGTCCTCTTTCAAGGGTTTTTGGTGGACCCGGACCC
CTATCCTAACAGAGGCGCCATCGTGGAATTCCTTTGCCACTCCTGTATGG
AGCTAACGGAAAGCTGGCTAGCCCAGATTAAGAATACCCCGGCTGACTTG
TTCGCTGCCTTCTTTATGATGTCCATGTCTCTTGAAGCTTGCAACAGTGA
ACTGTCCTGGAGGATTGTGGCCCATGCTTGTACTATTGCTCGGGCTCTTG
GATATTTCTCTGTTGATGCCGACCAACCAACACCCAGTCAGCAGATTTTG
CGGCCAGGCGGTCCCCCTGATCCTGAAAGTCAGATTGAGAAGAACAGGAT
GCGCTTTGAATTTTGGCACTTACTACGAACGGACTGCGTATTCCGCTTGT
CCTTTGGTAAACCAGCGCTCATTGCCGACGGGTCTTGGACGGTAAATTTT
CCGGATCCGAGTATCACTGGAGTTGATCACGCATCCACCCGGTTCATACA
AATCCATTTCTTTGCTTCCATGCGTCTCACGTTGGTTCTGATAAAATATT
TGGACATGGTCGATGCGGAACCCGACGTGGACACACCCGAGTACGATAGG
ACAATAGATGGTCTCATTGCCGAGGTCCAAACCATCATGTCCGACTGGTC
GCCGGAGGAACTCCTGACTACGACTACGAACCGCATGGATACCTGGTTTT
GCGTGGACATCCTATTCAGCAGCTACAAAATGCTCATCGTTTTCTACCAA
GCGAAGAAATGTAACCAAGATAGCCAATTCCTACCATATCACACGGTCGA
CATTGCACGGAAGAGCCTTCATATGTCCCGGTCCCTCATGTCGTCCTCTA
CACACCCATATTGGGGTATCAGTCTCATCCTTCTCCATCAGTTTGTTCCA
TTATTTATTGTCTCCATGAATATGATCGGATCTCCGGAGTGTGGAAATGC
CGAAGCCGATCTCGGTCTAGTGTCTTGGTTTAACCAATTCGTCGAGACGG
CGGCCCAGGAGCGAGGGGAGCTCAAACCATTGAGTATCATAATGAAGGCA
ATGGCTATAGCCTCTCAACACTCGGTGACAGGCTCACATTGAATGTCCAT
CGGCTCGGAAGATGACACATCCCCAAGCGTTCTACCCCGCGGCATCGAGT
CTCCTCTGCCAGCAGCACAGGGCGTAGCTCAGACTATTTTGAGAGGGCTA
AAGGACGAAAATACTAGGTCTCTTCTCAGTTCCAATGTGTTTTGTCACCT
CAAGACCGTGGAGTCTCGCTTCTGGGGGAACGAGAAGTGCATCCAGGCCA
TAGAGGTTGCCATGCGAGAGATCTCGCAGTTGGAGAACGTAGAAACCCCA
AAGCCTAAGGCTTCCCCTGTCATCACAAAAGAAACAGCACACAAATGGAT
AGAATTATATTATGAGGCGTACCAATTCGAGGGTTTCCGAATTCCTTTTG
AAAGAAATTTCATCCTCTCCCTCCCAGATCTCCTTCACAACCCACATGTT
CAACTCGACCCAACAATACGAATTGTGTATTACAACGTCCTCTTTCAAGG
GTTTTTGGTGGACCCGGACCCCTATCCTAACAGAGGCGCCATCGTGGAAT
TCCTTTGCCACTCCTGTATGGAGCTAACGGAAAGCTGGCTAGCCCAGATT
AAGAATACCCCGGCTGACTTGTTCGCTGCCTTCTTTATGATGTCCATGTC
TCTTGAAGCTTGCAACAGTGAACTGTCCTGGAGGATTGTGGCCCATGCTT
GTACTATTGCTCGGGCTCTTGGATATTTCTCTGTTGATGCCGACCAACCA
ACACCCAGTCAGCAGATTTTGCGGCCAGGCGGTCCCCCTGATCCTGAAAG
TCAGATTGAGAAGAACAGGATGCGCTTTGAATTTTGGCACTTACTACGAA
CGGACTGCGTATTCCGCTTGTCCTTTGGTAAACCAGCGCTCATTGCCGAC
GGGTCTTGGACGGTAAATTTTCCGGATCCGAGTATCACTGGAGTTGATCA
CGCATCCACCCGGTTCATACAAATCCATTTCTTTGCTTCCATGCGTCTCA
CGTTGGTTCTGATAAAATATTTGGACATGGTCGATGCGGAACCCGACGTG
GACACACCCGAGTACGATAGGACAATAGATGGTCTCATTGCCGAGGTCCA
AACCATCATGTCCGACTGGTCGCCGGAGGAACTCCTGACTACGACTACGA
ACCGCATGGATACCTGGTTTTGCGTGGACATCCTATTCAGCAGCTACAAA
ATGCTCATCGTTTTCTACCAAGCGAAGAAATGTAACCAAGATAGCCAATT
CCTACCATATCACACGGTCGACATTGCACGGAAGAGCCTTCATATGTCCC
GGTCCCTCATGTCGTCCTCTACACACCCATATTGGGGTATCAGTCTCATC
CTTCTCCATCAGTTTGTTCCATTATTTATTGTCTCCATGAATATGATCGG
ATCTCCGGAGTGTGGAAATGCCGAAGCCGATCTCGGTCTAGTGTCTTGGT
TTAACCAATTCGTCGAGACGGCGGCCCAGGAGCGAGGGGAGCTCAAACCA
TTGAGTATCATAATGAAGGCAATGGCTATAGCCTCTCAACACTCGGTGAC
AGGCTCACATTGAATGTCCATCGGCTCGGAAGATGACACATCCCCAAGCG
TTCTACCCCGCGGCATCGAGTCTCCTCTGCCAGCAGCACAGGGCGTAGCT
CAGACTATTTTGAGAGGGCTAAAGGACGAAAATACTAGGTCTCTTCTCAG
TTCCAATGTGTTTTGTCACCTCAAGACCGTGGAGTCTCGCTTCTGGGGGA
ACGAGAAGTGCATCCAGGCCATAGAGGTTGCCATGCGAGAGATCTCGCAG
TTGGAGAACGTAGAAACCCCAAAGCCTAAGGCTTCCCCTGTCATCACAAA
AGAAACAGCACACAAATGGATAGAATTATATTATGAGGCGTACCAATTCG
AGGGTTTCCGAATTCCTTTTGAAAGAAATTTCATCCTCTCCCTCCCAGAT
CTCCTTCACAACCCACATGTTCAACTCGACCCAACAATACGAATTGTGTA
TTACAACGTCCTCTTTCAAGGGTTTTTGGTGGACCCGGACCCCTATCCTA
ACAGAGGCGCCATCGTGGAATTCCTTTGCCACTCCTGTATGGAGCTAACG
GAAAGCTGGCTAGCCCAGATTAAGAATACCCCGGCTGACTTGTTCGCTGC
CTTCTTTATGATGTCCATGTCTCTTGAAGCTTGCAACAGTGAACTGTCCT
GGAGGATTGTGGCCCATGCTTGTACTATTGCTCGGGCTCTTGGATATTTC
TCTGTTGATGCCGACCAACCAACACCCAGTCAGCAGATTTTGCGGCCAGG
CGGTCCCCCTGATCCTGAAAGTCAGATTGAGAAGAACAGGATGCGCTTTG
AATTTTGGCACTTACTACGAACGGACTGCGTATTCCGCTTGTCCTTTGGT
AAACCAGCGCTCATTGCCGACGGGTCTTGGACGGTAAATTTTCCGGATCC
GAGTATCACTGGAGTTGATCACGCATCCACCCGGTTCATACAAATCCATT
TCTTTGCTTCCATGCGTCTCACGTTGGTTCTGATAAAATATTTGGACATG
GTCGATGCGGAACCCGACGTGGACACACCCGAGTACGATAGGACAATAGA
TGGTCTCATTGCCGAGGTCCAAACCATCATGTCCGACTGGTCGCCGGAGG
AACTCCTGACTACGACTACGAACCGCATGGATACCTGGTTTTGCGTGGAC
ATCCTATTCAGCAGCTACAAAATGCTCATCGTTTTCTACCAAGCGAAGAA
ATGTAACCAAGATAGCCAATTCCTACCATATCACACGGTCGACATTGCAC
GGAAGAGCCTTCATATGTCCCGGTCCCTCATGTCGTCCTCTACACACCCA
TATTGGGGTATCAGTCTCATCCTTCTCCATCAGTTTGTTCCATTATTTAT
TGTCTCCATGAATATGATCGGATCTCCGGAGTGTGGAAATGCCGAAGCCG
ATCTCGGTCTAGTGTCTTGGTTTAACCAATTCGTCGAGACGGCGGCCCAG
GAGCGAGGGGAGCTCAAACCATTGAGTATCATAATGAAGGCAATGGCTAT
AGCCTCTCAACACTCGGTGACAGGCTCACATTGAATGTCCATCGGCTCGG
AAGATGACACATCCCCAAGCGTTCTACCCCGCGGCATCGAGTCTCCTCTG
CCAGCAGCACAGGGCGTAGCTCAGACTATTTTGAGAGGGCTAAAGGACGA
AAATACTAGGTCTCTTCTCAGTTCCAATGTGTTTTGTCACCTCAAGACCG
TGGAGTCTCGCTTCTGGGGGAACGAGAAGTGCATCCAGGCCATAGAGGTT
GCCATGCGAGAGATCTCGCAGTTGGAGAACGTAGAAACCCCAAAGCCTAA
GGCTTCCCCTGTCATCACAAAAGAAACAGCACACAAATGGATAGAATTAT
ATTATGAGGCGTACCAATTCGAGGGTTTCCGAATTCCTTTTGAAAGAAAT
TTCATCCTCTCCCTCCCAGATCTCCTTCACAACCCACATGTTCAACTCGA
CCCAACAATACGAATTGTGTATTACAACGTCCTCTTTCAAGGGTTTTTGG
TGGACCCGGACCCCTATCCTAACAGAGGCGCCATCGTGGAATTCCTTTGC
CACTCCTGTATGGAGCTAACGGAAAGCTGGCTAGCCCAGATTAAGAATAC
CCCGGCTGACTTGTTCGCTGCCTTCTTTATGATGTCCATGTCTCTTGAAG
CTTGCAACAGTGAACTGTCCTGGAGGATTGTGGCCCATGCTTGTACTATT
GCTCGGGCTCTTGGATATTTCTCTGTTGATGCCGACCAACCAACACCCAG
TCAGCAGATTTTGCGGCCAGGCGGTCCCCCTGATCCTGAAAGTCAGATTG
AGAAGAACAGGATGCGCTTTGAATTTTGGCACTTACTACGAACGGACTGC
GTATTCCGCTTGTCCTTTGGTAAACCAGCGCTCATTGCCGACGGGTCTTG
GACGGTAAATTTTCCGGATCCGAGTATCACTGGAGTTGATCACGCATCCA
CCCGGTTCATACAAATCCATTTCTTTGCTTCCATGCGTCTCACGTTGGTT
CTGATAAAATATTTGGACATGGTCGATGCGGAACCCGACGTGGACACACC
CGAGTACGATAGGACAATAGATGGTCTCATTGCCGAGGTCCAAACCATCA
TGTCCGACTGGTCGCCGGAGGAACTCCTGACTACGACTACGAACCGCATG
GATACCTGGTTTTGCGTGGACATCCTATTCAGCAGCTACAAAATGCTCAT
CGTTTTCTACCAAGCGAAGAAATGTAACCAAGATAGCCAATTCCTACCAT
ATCACACGGTCGACATTGCACGGAAGAGCCTTCATATGTCCCGGTCCCTC
ATGTCGTCCTCTACACACCCATATTGGGGTATCAGTCTCATCCTTCTCCA
TCAGTTTGTTCCATTATTTATTGTCTCCATGAATATGATCGGATCTCCGG
AGTGTGGAAATGCCGAAGCCGATCTCGGTCTAGTGTCTTGGTTTAACCAA
TTCGTCGAGACGGCGGCCCAGGAGCGAGGGGAGCTCAAACCATTGAGTAT
CATAATGAAGGCAATGGCTATAGCCTCTCAACACTCGGTGACAGGCTCAC
ATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:810220..811966 + |
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