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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:812909..814914+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007658-T1 ID=CBS51388_007658-T1|Name=CBS51388_007658-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2006bp|location=Sequence derived from alignment at An12:812909..814914+ (Aspergillus niger CBS 513.88)
ATGGGTGATCACTCGAGCATCAGTACTGTCCGACAGATACAAGATGAGGT
TCACGTCGATGGAGTCAATGGGGAGGACCCCGGGTCGGACGACACAAAGA
CAGATGGCCTTGCCCTTGGCTTTGTCGACGAACCGACCACTGAGTTTTAC
GGCGAATCATCCAGCATTGCGTTCACGCGTTGTCTTTTAGAGGCTATGTC
TCTAGATTTGACCGCCAAGCGGACCAAGACGAAGTCACCATGCAATGAAA
ATGGGTTTGTTGAGTGCAACATCGCGCCGGTGTCTCAACAGCAGTCAGTC
ATGGAGTCTCCTAAAGATCAGCCTTCCTCGCCCACGACCCTTGTTTCCGA
AACAGAGATGGACTCCTTGCTGGACATTTATTTCAATGACTATGGCTCTC
TCTTTCCTTTTCTCCATGAGCCGACCTTCAGAGACACATACAATGAGTAC
AAGGCAAGCGGTTTTGTCAAAGCCCGGAGAGGCTGGCTCGGTGTGCTCAC
CATGACCTTTGCAATGGCTACCCACATTAATCAAAATGGAAAGGTCTCGG
CAAAGCATCGGTTCAGGCGGTCCCATGTTCTTTTTCAACGGGCGGTATCC
CTCTGCAGCGAATTGTCAGTGCGAACAGTCAGCCTTGACATTGTACAATA
TCTTCTGCTGGCCGTGCTCTATCTTCAAGGCACACAGATGCCTGTTCAGA
TGTGGACAATGCATGGGATGCTCGTACGAACAGCGACGGCGTTAGGTCTG
CACTCAGAGCAAGCAGCACAGGGGCTTCACCCCATACAGCAAGAAATCCG
CCGACGTACCTGGCTCACGATCTACTGTTTGGACAGAATCCTGAGCGTCA
CGTGGGGACGCCCGCCGGCAATTCCAGACGAGTATATCGTGGTGAAGTTG
CCATCGCCATGGGTGACCATGACCGAAACAACCACACATCATTCGAATGC
CGGCGACATTCACACGGCGTTCTTCGACGCGACCGTGCGGCTGCTCCAGG
TTGTGGGTCGGTCCCTAGCCACACAATACGGCCAGAATCTTGGGCCTGGG
GACCAAAAGATCGACGAGAGTACCGCTATTCACGCGGCAAGCACGATGCG
ACAGGACCTTCGGCGATGGACTTCCAGTTTACCATCATGTCTGGACCTGT
ATGAGACTGGATCGGATGTTCACCTGCAAAATGATAATACAATATCAAAC
CGGTTGCGGATAATTCTTACGCTTCGATATCATTTTGTCAACATTTTAAT
CCATCGACCACTTCTATGCACCATCCTGCGTTACTTGACCTTGTTAGGTT
CTCCCACAGGGAGACCATTACCTTATAGAATTCAGCTTGCAGTGGCGGAA
GCCCACGAGTGCATAGTCTCTGCTGAGAAGACAATCGAAGTAGTGCATGC
AGTTATCAACGCGCCGTACCCTTCTCACACCAGGTTAGATGTTTGGTTCT
TTACTTTATTTCATGGTAGGTGATCCCCATGTAGACTGAGTCATGTATAC
TTGCACATTGGCATACTAACTGATCACGTTGAGTATTAAATTCGGCTTTG
GTGATCCTGGGACGCTCCGTGTTGGAGCAACATGCAGTCTATATTAACGA
CAATGCCACTCAGAGCTCTGTTCAGGACTCTCTAAATCAAGCGGTGGAAT
CCCTAGATAAGTTAGACAAGGACAATCATGTGGTGTACGATTGTGCGAGG
TTCATCGCACGTCTTTCCCAACCACAGAGTGACCAAGGTTAGTGGGGTTG
GAAAGTCTCCGTATCACAGTGTTTGAAGGCTGACGCGCCAGAATATCGTC
ACCCAGTTGCTAAACAAGATAGTCTCGGGAATGGTTGTATTGCGGATACC
GGAAGTGAGGAGCTCACGGATGAACAGCTTTGGTCTACCGTTGGACTCTC
ATCTCTACCAGACCCAGATATGGTTCCACTTCCCAGGGGCGAGTTATTCG
GTCATTCCTTTGGCGGATTGAGCCTGAGCCTTGACCAGCTAAGCTCCACC
TACTAA back to topCoding sequence (CDS) from alignment at An12:812909..814914+ >CBS51388_007658-T1 ID=CBS51388_007658-T1|Name=CBS51388_007658-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5607bp|location=Sequence derived from alignment at An12:812909..814914+ (Aspergillus niger CBS 513.88)
ATGGGTGATCACTCGAGCATCAGTACTGTCCGACAGATACAAGATGAGGT
TCACGTCGATGGAGTCAATGGGGAGGACCCCGGGTCGGACGACACAAAGA
CAGATGGCCTTGCCCTTGGCTTTGTCGACGAACCGACCACTGAGTTTTAC
GGCGAATCATCCAGCATTGCGTTCACGCGTTGTCTTTTAGAGGCTATGTC
TCTAGATTTGACCGCCAAGCGGACCAAGACGAAGTCACCATGCAATGAAA
ATGGGTTTGTTGAGTGCAACATCGCGCCGGTGTCTCAACAGCAGTCAGTC
ATGGAGTCTCCTAAAGATCAGCCTTCCTCGCCCACGACCCTTGTTTCCGA
AACAGAGATGGACTCCTTGCTGGACATTTATTTCAATGACTATGGCTCTC
TCTTTCCTTTTCTCCATGAGCCGACCTTCAGAGACACATACAATGAGTAC
AAGGCAAGCGGTTTTGTCAAAGCCCGGAGAGGCTGGCTCGGTGTGCTCAC
CATGACCTTTGCAATGGCTACCCACATTAATCAAAATGGAAAGGTCTCGG
CAAAGCATCGGTTCAGGCGGTCCCATGTTCTTTTTCAACGGGCGGTATCC
CTCTGCAGCGAATTGTCAGTGCGAACAGTCAGCCTTGACATTGTACAATA
TCTTCTGCTGGCCGTGCTCTATCTTCAAGGCACACAGATGCCTGTTCAGA
TGTGGACAATGCATGGGATGCTCGTACGAACAGCGACGGCGTTAGGTCTG
CACTCAGAGCAAGCAGCACAGGGGCTTCACCCCATACAGCAAGAAATCCG
CCGACGTACCTGGCTCACGATCTACTGTTTGGACAGAATCCTGAGCGTCA
CGTGGGGACGCCCGCCGGCAATTCCAGACGAGTATATCGTGGTGAAGTTG
CCATCGCCATGGGTGACCATGACCGAAACAACCACACATCATTCGAATGC
CGGCGACATTCACACGGCGTTCTTCGACGCGACCGTGCGGCTGCTCCAGG
TTGTGGGTCGGTCCCTAGCCACACAATACGGCCAGAATCTTGGGCCTGGG
GACCAAAAGATCGACGAGAGTACCGCTATTCACGCGGCAAGCACGATGCG
ACAGGACCTTCGGCGATGGACTTCCAGTTTACCATCATGTCTGGACCTGT
ATGAGACTGGATCGGATGTTCACCTGCAAAATGATAATACAATATCAAAC
CGGTTGCGGATAATTCTTACGCTTCGATATCATTTTGTCAACATTTTAAT
CCATCGACCACTTCTATGCACCATCCTGCGTTACTTGACCTTGTTAGGTT
CTCCCACAGGGAGACCATTACCTTATAGAATTCAGCTTGCAGTGGCGGAA
GCCCACGAGTGCATAGTCTCTGCTGAGAAGACAATCGAAGTAGTGCATGC
AGTTATCAACGCGCCGTACCCTTCTCACACCAGGTTAGATGTTTGGTTCT
TTACTTTATTTCATGTATTAAATTCGGCTTTGGTGATCCTGGGACGCTCC
GTGTTGGAGCAACATGCAGTCTATATTAACGACAATGCCACTCAGAGCTC
TGTTCAGGACTCTCTAAATCAAGCGGTGGAATCCCTAGATAAGTTAGACA
AGGACAATCATGTGGTGTACGATTGTGCGAGGTTCATCGCACGTCTTTCC
CAACCACAGAGTGACCAAGTTGCTAAACAAGATAGTCTCGGGAATGGTTG
TATTGCGGATACCGGAAGTGAGGAGCTCACGGATGAACAGCTTTGGTCTA
CCGTTGGACTCTCATCTCTACCAGACCCAGATATGGTTCCACTTCCCAGG
GGCGAGTTATTCGGTCATTCCTTTGGCGGATTGAGCCTGAGCCTTGACCA
GCTAAGCTCCACCTACTAAATGGGTGATCACTCGAGCATCAGTACTGTCC
GACAGATACAAGATGAGGTTCACGTCGATGGAGTCAATGGGGAGGACCCC
GGGTCGGACGACACAAAGACAGATGGCCTTGCCCTTGGCTTTGTCGACGA
ACCGACCACTGAGTTTTACGGCGAATCATCCAGCATTGCGTTCACGCGTT
GTCTTTTAGAGGCTATGTCTCTAGATTTGACCGCCAAGCGGACCAAGACG
AAGTCACCATGCAATGAAAATGGGTTTGTTGAGTGCAACATCGCGCCGGT
GTCTCAACAGCAGTCAGTCATGGAGTCTCCTAAAGATCAGCCTTCCTCGC
CCACGACCCTTGTTTCCGAAACAGAGATGGACTCCTTGCTGGACATTTAT
TTCAATGACTATGGCTCTCTCTTTCCTTTTCTCCATGAGCCGACCTTCAG
AGACACATACAATGAGTACAAGGCAAGCGGTTTTGTCAAAGCCCGGAGAG
GCTGGCTCGGTGTGCTCACCATGACCTTTGCAATGGCTACCCACATTAAT
CAAAATGGAAAGGTCTCGGCAAAGCATCGGTTCAGGCGGTCCCATGTTCT
TTTTCAACGGGCGGTATCCCTCTGCAGCGAATTGTCAGTGCGAACAGTCA
GCCTTGACATTGTACAATATCTTCTGCTGGCCGTGCTCTATCTTCAAGGC
ACACAGATGCCTGTTCAGATGTGGACAATGCATGGGATGCTCGTACGAAC
AGCGACGGCGTTAGGTCTGCACTCAGAGCAAGCAGCACAGGGGCTTCACC
CCATACAGCAAGAAATCCGCCGACGTACCTGGCTCACGATCTACTGTTTG
GACAGAATCCTGAGCGTCACGTGGGGACGCCCGCCGGCAATTCCAGACGA
GTATATCGTGGTGAAGTTGCCATCGCCATGGGTGACCATGACCGAAACAA
CCACACATCATTCGAATGCCGGCGACATTCACACGGCGTTCTTCGACGCG
ACCGTGCGGCTGCTCCAGGTTGTGGGTCGGTCCCTAGCCACACAATACGG
CCAGAATCTTGGGCCTGGGGACCAAAAGATCGACGAGAGTACCGCTATTC
ACGCGGCAAGCACGATGCGACAGGACCTTCGGCGATGGACTTCCAGTTTA
CCATCATGTCTGGACCTGTATGAGACTGGATCGGATGTTCACCTGCAAAA
TGATAATACAATATCAAACCGGTTGCGGATAATTCTTACGCTTCGATATC
ATTTTGTCAACATTTTAATCCATCGACCACTTCTATGCACCATCCTGCGT
TACTTGACCTTGTTAGGTTCTCCCACAGGGAGACCATTACCTTATAGAAT
TCAGCTTGCAGTGGCGGAAGCCCACGAGTGCATAGTCTCTGCTGAGAAGA
CAATCGAAGTAGTGCATGCAGTTATCAACGCGCCGTACCCTTCTCACACC
AGGTTAGATGTTTGGTTCTTTACTTTATTTCATGTATTAAATTCGGCTTT
GGTGATCCTGGGACGCTCCGTGTTGGAGCAACATGCAGTCTATATTAACG
ACAATGCCACTCAGAGCTCTGTTCAGGACTCTCTAAATCAAGCGGTGGAA
TCCCTAGATAAGTTAGACAAGGACAATCATGTGGTGTACGATTGTGCGAG
GTTCATCGCACGTCTTTCCCAACCACAGAGTGACCAAGTTGCTAAACAAG
ATAGTCTCGGGAATGGTTGTATTGCGGATACCGGAAGTGAGGAGCTCACG
GATGAACAGCTTTGGTCTACCGTTGGACTCTCATCTCTACCAGACCCAGA
TATGGTTCCACTTCCCAGGGGCGAGTTATTCGGTCATTCCTTTGGCGGAT
TGAGCCTGAGCCTTGACCAGCTAAGCTCCACCTACTAAATGGGTGATCAC
TCGAGCATCAGTACTGTCCGACAGATACAAGATGAGGTTCACGTCGATGG
AGTCAATGGGGAGGACCCCGGGTCGGACGACACAAAGACAGATGGCCTTG
CCCTTGGCTTTGTCGACGAACCGACCACTGAGTTTTACGGCGAATCATCC
AGCATTGCGTTCACGCGTTGTCTTTTAGAGGCTATGTCTCTAGATTTGAC
CGCCAAGCGGACCAAGACGAAGTCACCATGCAATGAAAATGGGTTTGTTG
AGTGCAACATCGCGCCGGTGTCTCAACAGCAGTCAGTCATGGAGTCTCCT
AAAGATCAGCCTTCCTCGCCCACGACCCTTGTTTCCGAAACAGAGATGGA
CTCCTTGCTGGACATTTATTTCAATGACTATGGCTCTCTCTTTCCTTTTC
TCCATGAGCCGACCTTCAGAGACACATACAATGAGTACAAGGCAAGCGGT
TTTGTCAAAGCCCGGAGAGGCTGGCTCGGTGTGCTCACCATGACCTTTGC
AATGGCTACCCACATTAATCAAAATGGAAAGGTCTCGGCAAAGCATCGGT
TCAGGCGGTCCCATGTTCTTTTTCAACGGGCGGTATCCCTCTGCAGCGAA
TTGTCAGTGCGAACAGTCAGCCTTGACATTGTACAATATCTTCTGCTGGC
CGTGCTCTATCTTCAAGGCACACAGATGCCTGTTCAGATGTGGACAATGC
ATGGGATGCTCGTACGAACAGCGACGGCGTTAGGTCTGCACTCAGAGCAA
GCAGCACAGGGGCTTCACCCCATACAGCAAGAAATCCGCCGACGTACCTG
GCTCACGATCTACTGTTTGGACAGAATCCTGAGCGTCACGTGGGGACGCC
CGCCGGCAATTCCAGACGAGTATATCGTGGTGAAGTTGCCATCGCCATGG
GTGACCATGACCGAAACAACCACACATCATTCGAATGCCGGCGACATTCA
CACGGCGTTCTTCGACGCGACCGTGCGGCTGCTCCAGGTTGTGGGTCGGT
CCCTAGCCACACAATACGGCCAGAATCTTGGGCCTGGGGACCAAAAGATC
GACGAGAGTACCGCTATTCACGCGGCAAGCACGATGCGACAGGACCTTCG
GCGATGGACTTCCAGTTTACCATCATGTCTGGACCTGTATGAGACTGGAT
CGGATGTTCACCTGCAAAATGATAATACAATATCAAACCGGTTGCGGATA
ATTCTTACGCTTCGATATCATTTTGTCAACATTTTAATCCATCGACCACT
TCTATGCACCATCCTGCGTTACTTGACCTTGTTAGGTTCTCCCACAGGGA
GACCATTACCTTATAGAATTCAGCTTGCAGTGGCGGAAGCCCACGAGTGC
ATAGTCTCTGCTGAGAAGACAATCGAAGTAGTGCATGCAGTTATCAACGC
GCCGTACCCTTCTCACACCAGGTTAGATGTTTGGTTCTTTACTTTATTTC
ATGTATTAAATTCGGCTTTGGTGATCCTGGGACGCTCCGTGTTGGAGCAA
CATGCAGTCTATATTAACGACAATGCCACTCAGAGCTCTGTTCAGGACTC
TCTAAATCAAGCGGTGGAATCCCTAGATAAGTTAGACAAGGACAATCATG
TGGTGTACGATTGTGCGAGGTTCATCGCACGTCTTTCCCAACCACAGAGT
GACCAAGTTGCTAAACAAGATAGTCTCGGGAATGGTTGTATTGCGGATAC
CGGAAGTGAGGAGCTCACGGATGAACAGCTTTGGTCTACCGTTGGACTCT
CATCTCTACCAGACCCAGATATGGTTCCACTTCCCAGGGGCGAGTTATTC
GGTCATTCCTTTGGCGGATTGAGCCTGAGCCTTGACCAGCTAAGCTCCAC
CTACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:812909..814914 + |
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