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CBS51388_007668-T1, CBS51388_007668-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007668-T1
Unique NameCBS51388_007668-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:832790..833804+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007668-T1 ID=CBS51388_007668-T1|Name=CBS51388_007668-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1015bp|location=Sequence derived from alignment at An12:832790..833804+ (Aspergillus niger CBS 513.88)
ATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGG
TGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTGATTT
ACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGAT
GCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAA
GAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATT
TCATCCAGGAGGTAGCCCCTGCATTCTTAACGTGCTATGCTCGAGACATC
GGCTTTGCTAATGTATTGCTAGAACGGACCCGAGCGCCCCGAGTTGAAGC
AGGCGCTCATGGAAAAACTGGACCTGTATACCAGACCCGGTGTCATAATC
TCCTCTTCATCTTCTGGCCTCCCTGCATCGAGGTTTATTGGAAGATGCCA
GAAAGACCCCAGTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATC
TAGTCCCCCTGGTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACC
ATATCTGCGGCCCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCT
GCTCCACCACGAAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGA
TCAACAGCGAAGCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAG
GATCTCGACACGGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGAC
CGGTCCGTTTGTTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGT
TTGCCCAGCGTGTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAA
GACATGTTGAAGCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCT
GAAGAGAGAGGCTCTTCAATGGCTAGAAACAGTGAATTGGGATGGTTTCA
ATAGGAAGAGAGATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCAC
ACATCATCGCCCTAA
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Coding sequence (CDS) from alignment at An12:832790..833804+

>CBS51388_007668-T1 ID=CBS51388_007668-T1|Name=CBS51388_007668-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1908bp|location=Sequence derived from alignment at An12:832790..833804+ (Aspergillus niger CBS 513.88)
ATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGG
TGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTGATTT
ACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGAT
GCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAA
GAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATT
TCATCCAGGAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATG
GAAAAACTGGACCTGTATACCAGACCCGGTGTCATAATCTCCTCTTCATC
TTCTGGCCTCCCTGCATCGAGGTTTATTGGAAGATGCCAGAAAGACCCCA
GTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTG
GTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGC
CCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACG
AAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAA
GCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACAC
GGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTG
TTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGT
GTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAA
GCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGG
CTCTTCAATGGCTAGAAACAGTGAATTGGGATGGTTTCAATAGGAAGAGA
GATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCC
CTAAATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCA
TTGGTGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTATTG
ATTTACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCA
AGATGCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGG
CGAAGAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCC
GATTTCATCCAGGAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCT
CATGGAAAAACTGGACCTGTATACCAGACCCGGTGTCATAATCTCCTCTT
CATCTTCTGGCCTCCCTGCATCGAGGTTTATTGGAAGATGCCAGAAAGAC
CCCAGTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCC
CCTGGTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTG
CGGCCCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCAC
CACGAAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAG
CGAAGCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCG
ACACGGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCG
TTTGTTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCA
GCGTGTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGT
TGAAGCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGA
GAGGCTCTTCAATGGCTAGAAACAGTGAATTGGGATGGTTTCAATAGGAA
GAGAGATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCAT
CGCCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007668CBS51388_007668Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007668-T1.exon1CBS51388_007668-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007668-T1.exon2CBS51388_007668-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007668-T1.cdsCBS51388_007668-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007668-T1CBS51388_007668-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:832790..833804 +
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