|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:868282..870455+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007676-T1 ID=CBS51388_007676-T1|Name=CBS51388_007676-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2174bp|location=Sequence derived from alignment at An12:868282..870455+ (Aspergillus niger CBS 513.88)
ATGCGCTTTTCTGCTGCTTTTGCTCTAGCTGGCCTGGTGGCTGGCTCGGC
CGCTGCTGGCTGCCCGTACGCGGAGCGCGCCAACAACGATGCTGCTGCTG
CTTCCCCTGCCGGCTGTCCCTACGCTAAGCGCGCCGCTGCTGCTTCCACA
CAAGACAGCTCCCGGCTGGCCCGTCGGGGGCCCATCGAAGGCAAGAAGGG
TATCTTCTACAGTAAGTGGTTGACCAGTGGACTCCAATGATTGATGTACT
GAAGGACTACAAGTGAACCGCATTGGACCCTCCGGAGGACAACTATGGAT
CTCCAACTCTGACGGCACCAACGCGACTCAGTTGTTGGGCAACCAGAGCA
ATGCCTTCGACTACCACCCTACATGGTCTTCTGACGGAGAGTGGATTGTC
TTTACCAGCGAGCGCCGCGGTCCGGGTCAGTCGGACTTGTACCGCGTTCG
CGTGGATGGCTCGGGATTAGAGACGCTGGCGGCCACTGATTCTGTTGAAG
ACATTGGTGTCTTGTCTCCGAATGGAAAGACCCTAGCCTATGTGTCCACC
CAGGGCAACTACACCACCAACATTTGGGTCAAAGACCTTGCCTCGGGACA
GGCCCAAAACCTGACCGACACCGCGTCCAACAGAGCTGACAACACCTGGC
CCACTGGCCACTTCCGCCCCTCTTGGTCCCCCGATGGAGAGTGGATCGTC
TTCAGTTCGGATCGCAACACCGACTGGACCGGCCACAGCGATGGTACCGG
CTGGGAGCACACCCAGACTCTGGGTGTGTACGCCGTCCGCCCCGATGGCA
GTGACTTCCGCACCGTCATCCGCCAAGAGGGCTACTCGCTGGGTACTCCT
CAGTTCTCGCCTGATGGCAAGCGCATCATCTACAACAATATGACTACTGA
AGACACCTATGGCTGCCACGGTGTGTCTGCTCAGCAGGAGGCCGTCACTG
CACAGATCTACAGTGTGGACTTCGCTACTGGCTCCAACGTCATTGCCCAC
ACCTCCGGTAGCTACCCCAAGGTCGGTCAGCACTACATTGGCAATTCGAC
CAACATCGGTTATCTTATCAAGGCCGGTGACTACGAGGGCATTCACTACA
CCAAGCCCGACTTCACCCACCGCTCCTTCAACCTGACCAACATGCGCGAT
CCCTGGTGGTCCCCTGATGGCTCCAAGCTCGTCTACTGGGTCCCCAACTG
GACTCAGCAGGCTGCCGAGCTGAAGCTCTGGAGCTACGACACCGAGTGGG
AGTACCGCTACATGGATGTCTTCCCCATGCACAACACCGTCATCAACCGT
ATTGCGTCGACCCAGAAGGTCCTCGGCAGCGCCAACGGCTCTCTGGTCCA
CTCCTCCCCTGTCTACACTGATGTTGTCGACGCTCTCGACTCCTACGACA
TTTACAACATCAGCAACTCCACCGAGGTCGAGTGGCTTGAGGAAGGTAAT
TCTGGTGCCTTCCAGCCCTCCTGGAACCCCGACGGCACGGAGCTGGTGTC
CGGCTTCGGTGCCTGGTTCGTCAGCCGCACCACCAACACCGCCAAGATCT
ACCACGCTTTCGCCAACGGTACCTGGCACACCAACCTGACCGATGGATCT
GACAACTCTGGTTTCCCCTCTTGGTCCCCCGATGGATCTGCCATTGTCTA
CCGCAAGTGGAGCCTTGCTACTGAAGCCCCCCTGGGTCTGCACATCCTGA
ACTTCACCACCGGCAAGACCCACCAGCTTACCGATGGCTGGGACAACACC
CCCGGCTGGTCCCCCGACGGCGAGCGCATTGTCTTCACCCGCAACAACAA
CTGGACTGAGTCCTACGGCGCTCGCTGGTACGCCGACCGCTTCGATATCT
ACACTATCCGCCCTGACGGATCGGAGTTGACCCGTGTCACTGACAGTCTG
TCCAACGATGCTCAGTATGTTTATCCCTCTTTGTTTCTCGATTTCACTGT
AAGCTAATATGATATACAGCGCTGTGTGGTCCCAGGACGGCCGCATCATG
TGGAGCAGCGGTCAGTACGGCTTCAAGGACGAGAGTGCTCTCTTCGACGA
CACCTTCCAGCCCTACGGCCAGATCATGGTCATGAACTACGATGGTACCA
ACAAGACTCTTGTCACTGATACCATCTGGGAGGATTCGATGCCTCTGTAC
ATGCCCAACGAGTACCTTGAGTAG back to topCoding sequence (CDS) from alignment at An12:868282..870455+ >CBS51388_007676-T1 ID=CBS51388_007676-T1|Name=CBS51388_007676-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6228bp|location=Sequence derived from alignment at An12:868282..870455+ (Aspergillus niger CBS 513.88)
ATGCGCTTTTCTGCTGCTTTTGCTCTAGCTGGCCTGGTGGCTGGCTCGGC
CGCTGCTGGCTGCCCGTACGCGGAGCGCGCCAACAACGATGCTGCTGCTG
CTTCCCCTGCCGGCTGTCCCTACGCTAAGCGCGCCGCTGCTGCTTCCACA
CAAGACAGCTCCCGGCTGGCCCGTCGGGGGCCCATCGAAGGCAAGAAGGG
TATCTTCTACAGACTACAAGTGAACCGCATTGGACCCTCCGGAGGACAAC
TATGGATCTCCAACTCTGACGGCACCAACGCGACTCAGTTGTTGGGCAAC
CAGAGCAATGCCTTCGACTACCACCCTACATGGTCTTCTGACGGAGAGTG
GATTGTCTTTACCAGCGAGCGCCGCGGTCCGGGTCAGTCGGACTTGTACC
GCGTTCGCGTGGATGGCTCGGGATTAGAGACGCTGGCGGCCACTGATTCT
GTTGAAGACATTGGTGTCTTGTCTCCGAATGGAAAGACCCTAGCCTATGT
GTCCACCCAGGGCAACTACACCACCAACATTTGGGTCAAAGACCTTGCCT
CGGGACAGGCCCAAAACCTGACCGACACCGCGTCCAACAGAGCTGACAAC
ACCTGGCCCACTGGCCACTTCCGCCCCTCTTGGTCCCCCGATGGAGAGTG
GATCGTCTTCAGTTCGGATCGCAACACCGACTGGACCGGCCACAGCGATG
GTACCGGCTGGGAGCACACCCAGACTCTGGGTGTGTACGCCGTCCGCCCC
GATGGCAGTGACTTCCGCACCGTCATCCGCCAAGAGGGCTACTCGCTGGG
TACTCCTCAGTTCTCGCCTGATGGCAAGCGCATCATCTACAACAATATGA
CTACTGAAGACACCTATGGCTGCCACGGTGTGTCTGCTCAGCAGGAGGCC
GTCACTGCACAGATCTACAGTGTGGACTTCGCTACTGGCTCCAACGTCAT
TGCCCACACCTCCGGTAGCTACCCCAAGGTCGGTCAGCACTACATTGGCA
ATTCGACCAACATCGGTTATCTTATCAAGGCCGGTGACTACGAGGGCATT
CACTACACCAAGCCCGACTTCACCCACCGCTCCTTCAACCTGACCAACAT
GCGCGATCCCTGGTGGTCCCCTGATGGCTCCAAGCTCGTCTACTGGGTCC
CCAACTGGACTCAGCAGGCTGCCGAGCTGAAGCTCTGGAGCTACGACACC
GAGTGGGAGTACCGCTACATGGATGTCTTCCCCATGCACAACACCGTCAT
CAACCGTATTGCGTCGACCCAGAAGGTCCTCGGCAGCGCCAACGGCTCTC
TGGTCCACTCCTCCCCTGTCTACACTGATGTTGTCGACGCTCTCGACTCC
TACGACATTTACAACATCAGCAACTCCACCGAGGTCGAGTGGCTTGAGGA
AGGTAATTCTGGTGCCTTCCAGCCCTCCTGGAACCCCGACGGCACGGAGC
TGGTGTCCGGCTTCGGTGCCTGGTTCGTCAGCCGCACCACCAACACCGCC
AAGATCTACCACGCTTTCGCCAACGGTACCTGGCACACCAACCTGACCGA
TGGATCTGACAACTCTGGTTTCCCCTCTTGGTCCCCCGATGGATCTGCCA
TTGTCTACCGCAAGTGGAGCCTTGCTACTGAAGCCCCCCTGGGTCTGCAC
ATCCTGAACTTCACCACCGGCAAGACCCACCAGCTTACCGATGGCTGGGA
CAACACCCCCGGCTGGTCCCCCGACGGCGAGCGCATTGTCTTCACCCGCA
ACAACAACTGGACTGAGTCCTACGGCGCTCGCTGGTACGCCGACCGCTTC
GATATCTACACTATCCGCCCTGACGGATCGGAGTTGACCCGTGTCACTGA
CAGTCTGTCCAACGATGCTCACGCTGTGTGGTCCCAGGACGGCCGCATCA
TGTGGAGCAGCGGTCAGTACGGCTTCAAGGACGAGAGTGCTCTCTTCGAC
GACACCTTCCAGCCCTACGGCCAGATCATGGTCATGAACTACGATGGTAC
CAACAAGACTCTTGTCACTGATACCATCTGGGAGGATTCGATGCCTCTGT
ACATGCCCAACGAGTACCTTGAGTAGATGCGCTTTTCTGCTGCTTTTGCT
CTAGCTGGCCTGGTGGCTGGCTCGGCCGCTGCTGGCTGCCCGTACGCGGA
GCGCGCCAACAACGATGCTGCTGCTGCTTCCCCTGCCGGCTGTCCCTACG
CTAAGCGCGCCGCTGCTGCTTCCACACAAGACAGCTCCCGGCTGGCCCGT
CGGGGGCCCATCGAAGGCAAGAAGGGTATCTTCTACAGACTACAAGTGAA
CCGCATTGGACCCTCCGGAGGACAACTATGGATCTCCAACTCTGACGGCA
CCAACGCGACTCAGTTGTTGGGCAACCAGAGCAATGCCTTCGACTACCAC
CCTACATGGTCTTCTGACGGAGAGTGGATTGTCTTTACCAGCGAGCGCCG
CGGTCCGGGTCAGTCGGACTTGTACCGCGTTCGCGTGGATGGCTCGGGAT
TAGAGACGCTGGCGGCCACTGATTCTGTTGAAGACATTGGTGTCTTGTCT
CCGAATGGAAAGACCCTAGCCTATGTGTCCACCCAGGGCAACTACACCAC
CAACATTTGGGTCAAAGACCTTGCCTCGGGACAGGCCCAAAACCTGACCG
ACACCGCGTCCAACAGAGCTGACAACACCTGGCCCACTGGCCACTTCCGC
CCCTCTTGGTCCCCCGATGGAGAGTGGATCGTCTTCAGTTCGGATCGCAA
CACCGACTGGACCGGCCACAGCGATGGTACCGGCTGGGAGCACACCCAGA
CTCTGGGTGTGTACGCCGTCCGCCCCGATGGCAGTGACTTCCGCACCGTC
ATCCGCCAAGAGGGCTACTCGCTGGGTACTCCTCAGTTCTCGCCTGATGG
CAAGCGCATCATCTACAACAATATGACTACTGAAGACACCTATGGCTGCC
ACGGTGTGTCTGCTCAGCAGGAGGCCGTCACTGCACAGATCTACAGTGTG
GACTTCGCTACTGGCTCCAACGTCATTGCCCACACCTCCGGTAGCTACCC
CAAGGTCGGTCAGCACTACATTGGCAATTCGACCAACATCGGTTATCTTA
TCAAGGCCGGTGACTACGAGGGCATTCACTACACCAAGCCCGACTTCACC
CACCGCTCCTTCAACCTGACCAACATGCGCGATCCCTGGTGGTCCCCTGA
TGGCTCCAAGCTCGTCTACTGGGTCCCCAACTGGACTCAGCAGGCTGCCG
AGCTGAAGCTCTGGAGCTACGACACCGAGTGGGAGTACCGCTACATGGAT
GTCTTCCCCATGCACAACACCGTCATCAACCGTATTGCGTCGACCCAGAA
GGTCCTCGGCAGCGCCAACGGCTCTCTGGTCCACTCCTCCCCTGTCTACA
CTGATGTTGTCGACGCTCTCGACTCCTACGACATTTACAACATCAGCAAC
TCCACCGAGGTCGAGTGGCTTGAGGAAGGTAATTCTGGTGCCTTCCAGCC
CTCCTGGAACCCCGACGGCACGGAGCTGGTGTCCGGCTTCGGTGCCTGGT
TCGTCAGCCGCACCACCAACACCGCCAAGATCTACCACGCTTTCGCCAAC
GGTACCTGGCACACCAACCTGACCGATGGATCTGACAACTCTGGTTTCCC
CTCTTGGTCCCCCGATGGATCTGCCATTGTCTACCGCAAGTGGAGCCTTG
CTACTGAAGCCCCCCTGGGTCTGCACATCCTGAACTTCACCACCGGCAAG
ACCCACCAGCTTACCGATGGCTGGGACAACACCCCCGGCTGGTCCCCCGA
CGGCGAGCGCATTGTCTTCACCCGCAACAACAACTGGACTGAGTCCTACG
GCGCTCGCTGGTACGCCGACCGCTTCGATATCTACACTATCCGCCCTGAC
GGATCGGAGTTGACCCGTGTCACTGACAGTCTGTCCAACGATGCTCACGC
TGTGTGGTCCCAGGACGGCCGCATCATGTGGAGCAGCGGTCAGTACGGCT
TCAAGGACGAGAGTGCTCTCTTCGACGACACCTTCCAGCCCTACGGCCAG
ATCATGGTCATGAACTACGATGGTACCAACAAGACTCTTGTCACTGATAC
CATCTGGGAGGATTCGATGCCTCTGTACATGCCCAACGAGTACCTTGAGT
AGATGCGCTTTTCTGCTGCTTTTGCTCTAGCTGGCCTGGTGGCTGGCTCG
GCCGCTGCTGGCTGCCCGTACGCGGAGCGCGCCAACAACGATGCTGCTGC
TGCTTCCCCTGCCGGCTGTCCCTACGCTAAGCGCGCCGCTGCTGCTTCCA
CACAAGACAGCTCCCGGCTGGCCCGTCGGGGGCCCATCGAAGGCAAGAAG
GGTATCTTCTACAGACTACAAGTGAACCGCATTGGACCCTCCGGAGGACA
ACTATGGATCTCCAACTCTGACGGCACCAACGCGACTCAGTTGTTGGGCA
ACCAGAGCAATGCCTTCGACTACCACCCTACATGGTCTTCTGACGGAGAG
TGGATTGTCTTTACCAGCGAGCGCCGCGGTCCGGGTCAGTCGGACTTGTA
CCGCGTTCGCGTGGATGGCTCGGGATTAGAGACGCTGGCGGCCACTGATT
CTGTTGAAGACATTGGTGTCTTGTCTCCGAATGGAAAGACCCTAGCCTAT
GTGTCCACCCAGGGCAACTACACCACCAACATTTGGGTCAAAGACCTTGC
CTCGGGACAGGCCCAAAACCTGACCGACACCGCGTCCAACAGAGCTGACA
ACACCTGGCCCACTGGCCACTTCCGCCCCTCTTGGTCCCCCGATGGAGAG
TGGATCGTCTTCAGTTCGGATCGCAACACCGACTGGACCGGCCACAGCGA
TGGTACCGGCTGGGAGCACACCCAGACTCTGGGTGTGTACGCCGTCCGCC
CCGATGGCAGTGACTTCCGCACCGTCATCCGCCAAGAGGGCTACTCGCTG
GGTACTCCTCAGTTCTCGCCTGATGGCAAGCGCATCATCTACAACAATAT
GACTACTGAAGACACCTATGGCTGCCACGGTGTGTCTGCTCAGCAGGAGG
CCGTCACTGCACAGATCTACAGTGTGGACTTCGCTACTGGCTCCAACGTC
ATTGCCCACACCTCCGGTAGCTACCCCAAGGTCGGTCAGCACTACATTGG
CAATTCGACCAACATCGGTTATCTTATCAAGGCCGGTGACTACGAGGGCA
TTCACTACACCAAGCCCGACTTCACCCACCGCTCCTTCAACCTGACCAAC
ATGCGCGATCCCTGGTGGTCCCCTGATGGCTCCAAGCTCGTCTACTGGGT
CCCCAACTGGACTCAGCAGGCTGCCGAGCTGAAGCTCTGGAGCTACGACA
CCGAGTGGGAGTACCGCTACATGGATGTCTTCCCCATGCACAACACCGTC
ATCAACCGTATTGCGTCGACCCAGAAGGTCCTCGGCAGCGCCAACGGCTC
TCTGGTCCACTCCTCCCCTGTCTACACTGATGTTGTCGACGCTCTCGACT
CCTACGACATTTACAACATCAGCAACTCCACCGAGGTCGAGTGGCTTGAG
GAAGGTAATTCTGGTGCCTTCCAGCCCTCCTGGAACCCCGACGGCACGGA
GCTGGTGTCCGGCTTCGGTGCCTGGTTCGTCAGCCGCACCACCAACACCG
CCAAGATCTACCACGCTTTCGCCAACGGTACCTGGCACACCAACCTGACC
GATGGATCTGACAACTCTGGTTTCCCCTCTTGGTCCCCCGATGGATCTGC
CATTGTCTACCGCAAGTGGAGCCTTGCTACTGAAGCCCCCCTGGGTCTGC
ACATCCTGAACTTCACCACCGGCAAGACCCACCAGCTTACCGATGGCTGG
GACAACACCCCCGGCTGGTCCCCCGACGGCGAGCGCATTGTCTTCACCCG
CAACAACAACTGGACTGAGTCCTACGGCGCTCGCTGGTACGCCGACCGCT
TCGATATCTACACTATCCGCCCTGACGGATCGGAGTTGACCCGTGTCACT
GACAGTCTGTCCAACGATGCTCACGCTGTGTGGTCCCAGGACGGCCGCAT
CATGTGGAGCAGCGGTCAGTACGGCTTCAAGGACGAGAGTGCTCTCTTCG
ACGACACCTTCCAGCCCTACGGCCAGATCATGGTCATGAACTACGATGGT
ACCAACAAGACTCTTGTCACTGATACCATCTGGGAGGATTCGATGCCTCT
GTACATGCCCAACGAGTACCTTGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR011659 |
| DBxref | PFAM:PF07676 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:868282..870455 + |
|
