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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:884113..886080- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007680-T1 ID=CBS51388_007680-T1|Name=CBS51388_007680-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1968bp|location=Sequence derived from alignment at An12:884113..886080- (Aspergillus niger CBS 513.88)
ATGAAGTTCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGC
GGAGCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCA
AACCACATACTAGCCACGACGACCTCAACCACAACATCAACACCATCCCG
CACGGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTA
CATAATTGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAG
TCGAGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCA
TGGGAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATT
CGGCAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCA
ACGACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGA
AATGGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACACGGCC
ACACAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACCGGGT
GGAATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCGAGG
GATCCGACGTCGGATGATATTACGAAGGGGTCGTTCCATAAGTTTGATGC
CGAGTGTCATAATAAGGAACCGGAGAAGGGGAAGGTTAAAGTCGGGGCGA
GGGATCGGAAGTATGGTTGGTCGCCGTTGATTCGGGCGTTGATGCACACG
GTTAACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGG
GGATCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAA
TCCGGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGAT
GAGTTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGT
TCATCTAAACGAGGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGA
AAGGTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCT
TGGGCTAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCT
CATTCTGCAGTGGTCGGGAATCGGTCCGAAAGTCTGGCTTGATGCTGCGG
GAATAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAA
ACAACGACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAACGGCCAAGG
CCAGGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCT
CAGATATGGAAAAGCTCCTGAANGACGATACAGAGCTCGACAAATGGGCA
GAACACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAA
ACAGTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATG
CCGAACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAAT
CTGATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTA
TCTGCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACT
TGAACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACG
TATGACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGT
ACCAGAGAACGCGAATCTAACTGAATGGGCCGATTATGTGAAGCAAAACT
ACCGGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAG
CTTGGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTT
GAGAGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTA
TGACGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAG
GATGCTGGTAATGCTTAG back to topCoding sequence (CDS) from alignment at An12:884113..886080- >CBS51388_007680-T1 ID=CBS51388_007680-T1|Name=CBS51388_007680-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1968bp|location=Sequence derived from alignment at An12:884113..886080- (Aspergillus niger CBS 513.88)
ATGAAGTTCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGC
GGAGCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCA
AACCACATACTAGCCACGACGACCTCAACCACAACATCAACACCATCCCG
CACGGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTA
CATAATTGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAG
TCGAGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCA
TGGGAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATT
CGGCAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCA
ACGACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGA
AATGGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACACGGCC
ACACAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACCGGGT
GGAATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCGAGG
GATCCGACGTCGGATGATATTACGAAGGGGTCGTTCCATAAGTTTGATGC
CGAGTGTCATAATAAGGAACCGGAGAAGGGGAAGGTTAAAGTCGGGGCGA
GGGATCGGAAGTATGGTTGGTCGCCGTTGATTCGGGCGTTGATGCACACG
GTTAACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGG
GGATCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAA
TCCGGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGAT
GAGTTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGT
TCATCTAAACGAGGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGA
AAGGTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCT
TGGGCTAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCT
CATTCTGCAGTGGTCGGGAATCGGTCCGAAAGTCTGGCTTGATGCTGCGG
GAATAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAA
ACAACGACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAACGGCCAAGG
CCAGGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCT
CAGATATGGAAAAGCTCCTGAANGACGATACAGAGCTCGACAAATGGGCA
GAACACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAA
ACAGTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATG
CCGAACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAAT
CTGATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTA
TCTGCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACT
TGAACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACG
TATGACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGT
ACCAGAGAACGCGAATCTAACTGAATGGGCCGATTATGTGAAGCAAAACT
ACCGGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAG
CTTGGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTT
GAGAGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTA
TGACGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAG
GATGCTGGTAATGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR027424 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR000172 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:884113..886080 - |
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