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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:911924..913718+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007690-T1 ID=CBS51388_007690-T1|Name=CBS51388_007690-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1795bp|location=Sequence derived from alignment at An12:911924..913718+ (Aspergillus niger CBS 513.88)
ATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCC
CCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGTACGT
GTGATCCGATCCTTTGTCCCGATGCGTTCACATTTGTTTACCCCTCTACC
TTCGTTTTTCTTTCGGCGAAGTTAACCGTCGCTTGTAGGACTCGTGACGG
ACTATGGATCATCAATGGTGCAATGGATACGCACACGGAAACCCCGCTAT
AAAGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTATGTTGT
GGATGTAAGTGCGACAGATTTCCGCGCACATTCTGATACAACTCTTCGAT
TAACACGAGCGGAATTTTCTTTGTTAGATGCTCCCCCCTCTTGCACGAGT
CCATTCTCCGGCGGATACTATACCAGTGCGGCATTTACATCAGTCGATTG
GAAAATCGAAGAAACCGATCACTGTCGTACGATGGACACCGGAAGGAAGA
CGCCTGCTAACGGGAGGCCACACGGGCGAATTCATGCTATGGAATGGAAC
TGCCTTCAACTTCGAAACTGTCATGGATGTGGGTGTCGCTCGGATACATT
AATTCCCTAGCCGAAGATTTTTGTTGCTGATGGTTGAATAGGCACATTAT
GATCAGCTACAAGCTGGAGTAACCTCCTTAGCTTGGTCCCACAGTCATGA
CTGGTTAATATCCGGAGGACAGAAGGGTGACGTGAAGTATTGGCGACCTA
ACTTTAACAACGTCGAGACGATCGATGACGCACATCACGATGCTGTACGC
GATTTGGCATGGTCACCAAGTGATACTAAATTCCTCTCCGCATCCGACGA
CACAACGCTGAAGATATTCGATTTCACCGCGAGAACTTGCGATACCGTTC
TCACCGGTCACAACTGGGATGTCAAATCCTGCGACTGGCATCCCACCAAA
GGTCTCCTTGTCTCTGGGTCCAAAGACCATCAGGTCAAGTTCTGGGATCC
GCGCACAGCAAGATGCTTGACAACGCTCCATAGCCACAAGAATACCGTCA
CAGCGACGAGGTTTTCCCGCGTAAACAATAACCTTCTAGCTACATCCTCT
CGGGATCAAACGGCGAGAGTTTTCGACTTGCGCATGATGCGAGATATTTG
TATCCTCCGAGGCCATGAGAAGCCCGTCTCCTCTCTAACATGGCACCCGA
TTCACAGCTCTCTCATATCTACAGGTAGTGAGGACGGGTCTCTATANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGG
CAGAGAGCTTGGTCGATNGAAGAAACCGGCCGGAATGTCATCTCTTCCCG
GAATTCAATTCGCACCACCCGGCGCCGCACCACAGCCAGACGGGATGGGT
TCGATACTGCCAGGAATTGGGGCTCCCCAGCCCCCACCCCAGCCGGGGTT
TTCCACTTCAATGCCGCAAATGGATCCTGGGCGTCTAGCAGCTCTTTTGT
CCAATCAACCGCCCCCTCAGCCGAACAATTTCCCTCCCACAACGGGACTG
CCAGGGTTTCCCATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGT
TGACCTGGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGC
CCCAGAACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCC
GGCCTGCAAGGGAGCAGTACGCCCGATCACGGATATGGAAGATGA back to topCoding sequence (CDS) from alignment at An12:911924..913718+ >CBS51388_007690-T1 ID=CBS51388_007690-T1|Name=CBS51388_007690-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5925bp|location=Sequence derived from alignment at An12:911924..913718+ (Aspergillus niger CBS 513.88)
ATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCC
CCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGACTCG
TGACGGACTATGGATCATCAATGGTGCAATGGATACGCACACGGAAACCC
CGCTATAAAGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTA
TGTTGTGGATATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATA
CTATACCAGTGCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCG
ATCACTGTCGTACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGG
CCACACGGGCGAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAA
CTGTCATGGATGCACATTATGATCAGCTACAAGCTGGAGTAACCTCCTTA
GCTTGGTCCCACAGTCATGACTGGTTAATATCCGGAGGACAGAAGGGTGA
CGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAGACGATCGATGACG
CACATCACGATGCTGTACGCGATTTGGCATGGTCACCAAGTGATACTAAA
TTCCTCTCCGCATCCGACGACACAACGCTGAAGATATTCGATTTCACCGC
GAGAACTTGCGATACCGTTCTCACCGGTCACAACTGGGATGTCAAATCCT
GCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAGACCAT
CAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCTTGACAACGCTCCA
TAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCCCGCGTAAACAATA
ACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAGAGTTTTCGACTTG
CGCATGATGCGAGATATTTGTATCCTCCGAGGCCATGAGAAGCCCGTCTC
CTCTCTAACATGGCACCCGATTCACAGCTCTCTCATATCTACAGGGTTTC
CCATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCA
GAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTT
TCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAG
GGAGCAGTACGCCCGATCACGGATATGGAAGATGAATGGCTTTTTACGAC
GACCCTGGGAACGATTCCCAGCCATTTGGGAGGCCCCCTAAATCCTACGA
AGGAGGGATTGCTGGGCCGCGACGACCGAGACTCGTGACGGACTATGGAT
CATCAATGGTGCAATGGATACGCACACGGAAACCCCGCTATAAAGGAGGT
CATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTATGTTGTGGATATGCT
CCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATACTATACCAGTGCGGC
ATTTACATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGTCGTACGA
TGGACACCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGGGCGAATT
CATGCTATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATGGATGCAC
ATTATGATCAGCTACAAGCTGGAGTAACCTCCTTAGCTTGGTCCCACAGT
CATGACTGGTTAATATCCGGAGGACAGAAGGGTGACGTGAAGTATTGGCG
ACCTAACTTTAACAACGTCGAGACGATCGATGACGCACATCACGATGCTG
TACGCGATTTGGCATGGTCACCAAGTGATACTAAATTCCTCTCCGCATCC
GACGACACAACGCTGAAGATATTCGATTTCACCGCGAGAACTTGCGATAC
CGTTCTCACCGGTCACAACTGGGATGTCAAATCCTGCGACTGGCATCCCA
CCAAAGGTCTCCTTGTCTCTGGGTCCAAAGACCATCAGGTCAAGTTCTGG
GATCCGCGCACAGCAAGATGCTTGACAACGCTCCATAGCCACAAGAATAC
CGTCACAGCGACGAGGTTTTCCCGCGTAAACAATAACCTTCTAGCTACAT
CCTCTCGGGATCAAACGGCGAGAGTTTTCGACTTGCGCATGATGCGAGAT
ATTTGTATCCTCCGAGGCCATGAGAAGCCCGTCTCCTCTCTAACATGGCA
CCCGATTCACAGCTCTCTCATATCTACAGGGTTTCCCATGCACCCTGCTA
TGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAGAACTGCAGAAGCAG
CTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCGCCAAATTT
TCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAGTACGCCCG
ATCACGGATATGGAAGATGAATGGCTTTTTACGACGACCCTGGGAACGAT
TCCCAGCCATTTGGGAGGCCCCCTAAATCCTACGAAGGAGGGATTGCTGG
GCCGCGACGACCGAGACTCGTGACGGACTATGGATCATCAATGGTGCAAT
GGATACGCACACGGAAACCCCGCTATAAAGGAGGTCATCAGATTGAGGTG
GAAAGGCCTAGTGCAAGCTATGTTGTGGATATGCTCCCCCCTCTTGCACG
AGTCCATTCTCCGGCGGATACTATACCAGTGCGGCATTTACATCAGTCGA
TTGGAAAATCGAAGAAACCGATCACTGTCGTACGATGGACACCGGAAGGA
AGACGCCTGCTAACGGGAGGCCACACGGGCGAATTCATGCTATGGAATGG
AACTGCCTTCAACTTCGAAACTGTCATGGATGCACATTATGATCAGCTAC
AAGCTGGAGTAACCTCCTTAGCTTGGTCCCACAGTCATGACTGGTTAATA
TCCGGAGGACAGAAGGGTGACGTGAAGTATTGGCGACCTAACTTTAACAA
CGTCGAGACGATCGATGACGCACATCACGATGCTGTACGCGATTTGGCAT
GGTCACCAAGTGATACTAAATTCCTCTCCGCATCCGACGACACAACGCTG
AAGATATTCGATTTCACCGCGAGAACTTGCGATACCGTTCTCACCGGTCA
CAACTGGGATGTCAAATCCTGCGACTGGCATCCCACCAAAGGTCTCCTTG
TCTCTGGGTCCAAAGACCATCAGGTCAAGTTCTGGGATCCGCGCACAGCA
AGATGCTTGACAACGCTCCATAGCCACAAGAATACCGTCACAGCGACGAG
GTTTTCCCGCGTAAACAATAACCTTCTAGCTACATCCTCTCGGGATCAAA
CGGCGAGAGTTTTCGACTTGCGCATGATGCGAGATATTTGTATCCTCCGA
GGCCATGAGAAGCCCGTCTCCTCTCTAACATGGCACCCGATTCACAGCTC
TCTCATATCTACAGGGTTTCCCATGCACCCTGCTATGTCGGGGACACCTC
CGGTGAACGTTGACCTGGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGA
ATCTCGCTGCCCCAGAACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGG
GGGCCTTCCCGGCCTGCAAGGGAGCAGTACGCCCGATCACGGATATGGAA
GATGAATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGCCATTTGGG
AGGCCCCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAG
ACTCGTGACGGACTATGGATCATCAATGGTGCAATGGATACGCACACGGA
AACCCCGCTATAAAGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCA
AGCTATGTTGTGGATATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGC
GGATACTATACCAGTGCGGCATTTACATCAGTCGATTGGAAAATCGAAGA
AACCGATCACTGTCGTACGATGGACACCGGAAGGAAGACGCCTGCTAACG
GGAGGCCACACGGGCGAATTCATGCTATGGAATGGAACTGCCTTCAACTT
CGAAACTGTCATGGATGCACATTATGATCAGCTACAAGCTGGAGTAACCT
CCTTAGCTTGGTCCCACAGTCATGACTGGTTAATATCCGGAGGACAGAAG
GGTGACGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAGACGATCGA
TGACGCACATCACGATGCTGTACGCGATTTGGCATGGTCACCAAGTGATA
CTAAATTCCTCTCCGCATCCGACGACACAACGCTGAAGATATTCGATTTC
ACCGCGAGAACTTGCGATACCGTTCTCACCGGTCACAACTGGGATGTCAA
ATCCTGCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAG
ACCATCAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCTTGACAACG
CTCCATAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCCCGCGTAAA
CAATAACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAGAGTTTTCG
ACTTGCGCATGATGCGAGATATTTGTATCCTCCGAGGCCATGAGAAGCCC
GTCTCCTCTCTAACATGGCACCCGATTCACAGCTCTCTCATATCTACAGG
GTTTCCCATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGACC
TGGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAG
AACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCT
GCAAGGGAGCAGTACGCCCGATCACGGATATGGAAGATGAATGGCTTTTT
ACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCCCCCTAAATCC
TACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGACTCGTGACGGACTA
TGGATCATCAATGGTGCAATGGATACGCACACGGAAACCCCGCTATAAAG
GAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTATGTTGTGGAT
ATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATACTATACCAGT
GCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGTCG
TACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGGGC
GAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATGGA
TGCACATTATGATCAGCTACAAGCTGGAGTAACCTCCTTAGCTTGGTCCC
ACAGTCATGACTGGTTAATATCCGGAGGACAGAAGGGTGACGTGAAGTAT
TGGCGACCTAACTTTAACAACGTCGAGACGATCGATGACGCACATCACGA
TGCTGTACGCGATTTGGCATGGTCACCAAGTGATACTAAATTCCTCTCCG
CATCCGACGACACAACGCTGAAGATATTCGATTTCACCGCGAGAACTTGC
GATACCGTTCTCACCGGTCACAACTGGGATGTCAAATCCTGCGACTGGCA
TCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAGACCATCAGGTCAAGT
TCTGGGATCCGCGCACAGCAAGATGCTTGACAACGCTCCATAGCCACAAG
AATACCGTCACAGCGACGAGGTTTTCCCGCGTAAACAATAACCTTCTAGC
TACATCCTCTCGGGATCAAACGGCGAGAGTTTTCGACTTGCGCATGATGC
GAGATATTTGTATCCTCCGAGGCCATGAGAAGCCCGTCTCCTCTCTAACA
TGGCACCCGATTCACAGCTCTCTCATATCTACAGGGTTTCCCATGCACCC
TGCTATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAGAACTGCAGA
AGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCGCCA
AATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAGTAC
GCCCGATCACGGATATGGAAGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:911924..913718 + |
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