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CBS51388_007704-T1, CBS51388_007704-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007704-T1
Unique NameCBS51388_007704-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:958651..960553+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007704-T1 ID=CBS51388_007704-T1|Name=CBS51388_007704-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1903bp|location=Sequence derived from alignment at An12:958651..960553+ (Aspergillus niger CBS 513.88)
ATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTCT
GCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAGG
CCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCATG
GTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGAA
GAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGCC
TTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGGT
GATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGCT
CAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCCA
TCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCTA
CCGGTCGTGCGCCACTCGATCTCTTCCCAAGCTCTTTCCCGGACTGGCGG
ACATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTGAAA
GACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACCGAA
TTTTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGCTCG
CCTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAGGAC
AAGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGAGGA
GAAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGTTGT
CGGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAGTTG
GTTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAAGTA
CCGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGAGCA
TCCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCACCTG
CTTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAGCCA
CCTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGCCTA
CAACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTCATC
CTCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAAGCG
TTACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCCCCC
GTCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGTGGC
AACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGCAGG
CGACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGGTCA
AGAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTAGCC
CAGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGACTC
CAGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCCCGA
TCCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGCCAG
GACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGGCGC
GGAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTGCCT
CTCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCACGTC
CCACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCGCAT
GGGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCAAGG
ACGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTGATT
TAG
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Coding sequence (CDS) from alignment at An12:958651..960553+

>CBS51388_007704-T1 ID=CBS51388_007704-T1|Name=CBS51388_007704-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3756bp|location=Sequence derived from alignment at An12:958651..960553+ (Aspergillus niger CBS 513.88)
ATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTCT
GCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAGG
CCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCATG
GTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGAA
GAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGCC
TTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGGT
GATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGCT
CAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCCA
TCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCTA
CCGGTCCTCTTTCCCGGACTGGCGGACATTGTACCGACTCCCATTCAACG
CCTTGCTATCCCACAACTCCTGAAAGACCCTATCCCGAAGAGAACATCTA
AAGACGTCTCAGACCATGAACCGAATTTTGAACAGTACCTTCTGGCCGCC
GAGACCGGGTCGGGAAAGACGCTCGCCTATCTGATTCCCTTGATCGACTC
CCTGAAGCGTATGGAAGTGGAGGACAAGGAATTCGAGAAGTGGGAGGCAG
AACAAAAAGCCAAGGAGCGGGAGGAGAAGCTCAAAAACCGGGCTTTCGAC
ATTGAACCGGAAGAGGCTCCGTTGTCGGACGCAGGTAGACCGCGGGTCAT
TATCCTCGTCCCGACCTCCGAGTTGGTTGCCCAGGTTGGCGCCAAAGTCA
AGGCTCTTTCGCACACGGTCAAGTACCGGTCGGGGATGATCTCGTCCAAC
CTGACCCCTCGTCGGATCAAGAGCATCCTCTTCAACCCGAGCGGGATTGA
TATTCTCGTCGCCACTCCCCACCTGCTTGCCTCGATCGCCAAGACGGATC
CATATGTGCTGAGTCGCGTCAGCCACCTGGTGCTGGATGAGGCGGACTCG
CTCATGGATCGGTCCTTCTTGCCTACAACGACTGAGATCATTGAAAAGTC
AGCCTCTTCTCTTCACAAGCTCATCCTCTGCTCCGCCACCATTCCCCGCA
GTCTCGACAACCTCCTCCGCAAGCGTTACCCCGACATCCGACGACTGACG
ACGCCAAACCTGCATGCTATCCCCCGTCGCGTCCAGCTCGGAGTGGTGGA
CATCCAACGGGACCCCTACCGTGGCAACCGCAGCCTGGCCTGCGCCGACG
TGATCTGGTCCATCGGAAAGGCAGGCGACACAGAACCGACGCACCCTTTC
CTGGCCCAGGCCGGACCCAAGGTCAAGAAGATCCTAGTCTTTGTCAACGA
GCGTGAAGAAGCCGACGAGGTAGCCCAGTTCCTGCGCTCAAAGGGCATCG
ACGCCCAGTCCTTCTCCCGGGACTCCAGCAGCCGCAAGCAAGAAGAGCTG
CTTGAAGAATTCACCGAGTCCCCGATCCCTCCCACCGCAGAGGAGATCAT
GCTGGCCAAGAACAAGCGCCGCCAGGACAACTCCATTCCCTTTGTCTTCC
CCGAACAGCAGAACAAGCCGGGCGCGGAGCGCGGCCTCCCGAACACCAAG
GTTCTCGTGACGACGGATATTGCCTCTCGCGGAATTGACACCATCGCCGT
CAAGACGGTCATCCTCTACCACGTCCCACACAACACGATCGACTTCATCC
ACCGACTCGGCCGTCTCGGTCGCATGGGCAAGCGTGGCCGAGCCGTGGTC
TTGGTCGGCAAGAAGGACCGCAAGGACGTGGTCAAGGAAGTGCGCGAGGG
CATGTTCCGCGGCCAGGCCTTGATTTAGATGAATCGCCTGGGCAGACTGT
CTCTGCCGCTACGGCCTCAAGTTTGTCTGCTCTGTCAGACGCAGGCGACC
ATGTCCTCTCCTCTCGCCGGATGGCAGGCCGTCCGCTCCATGGCAACCGT
CCGACAGCGCCGCCAGGCCGCCCGCATGGTTCTGTCCTCCAATGTCGACA
AATCCTCCCTGAAGCAAGGACGTTCGAAGAGAGATCGTGCCGGCCCCTGG
TCCGGCATGAACCAGACGGAGGCGCGCCTTCGGGATGCGCCACGGTCAAG
GTCTCGGGCAGCTCTCAAACGCTCGGGTGATTCCGAAGATGATAAGCAGA
AGCCGGACAGTCCTCTCTACAAGGCGCTCAAGATGCAGACGGCATTGGCG
CCCATTCCTTACGGTCGCCGAACCGCCATCAAGAACAAGATCGCAGAAGT
TTCGAGTTTCGACCAGTTTCCTCTGCTACCGGTCCTCTTTCCCGGACTGG
CGGACATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTG
AAAGACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACC
GAATTTTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGC
TCGCCTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAG
GACAAGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGA
GGAGAAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGT
TGTCGGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAG
TTGGTTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAA
GTACCGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGA
GCATCCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCAC
CTGCTTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAG
CCACCTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGC
CTACAACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTC
ATCCTCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAA
GCGTTACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCC
CCCGTCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGT
GGCAACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGC
AGGCGACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGG
TCAAGAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTA
GCCCAGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGA
CTCCAGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCC
CGATCCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGC
CAGGACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGG
CGCGGAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTG
CCTCTCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCAC
GTCCCACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCG
CATGGGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCA
AGGACGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTG
ATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRH4CBS51388_007704Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007704-T1.exon1CBS51388_007704-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007704-T1.exon2CBS51388_007704-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007704-T1.cdsCBS51388_007704-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007704-T1CBS51388_007704-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:958651..960553 +
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