|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:965747..966358+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007707-T1 ID=CBS51388_007707-T1|Name=CBS51388_007707-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=612bp|location=Sequence derived from alignment at An12:965747..966358+ (Aspergillus niger CBS 513.88)
ATGATTCAATTAAAGGTGTGTGTGCGATTCTACTGGTGTTCATGATGCGG
GGGAAAGGAATTTTTATCGGACTGACAAGCCCCGATCCAGACAATGCTTA
ACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCCTG
AAGAAGAAGCGCCCCGCCACCGTTGGTACGATAACCCGCTCTTTTCCATT
CACTATTCAAAGGAATAACACTGATGTTGGGGTTCCGGGATGAACAGGTG
ACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGC
AGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCA
TGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGA
TCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGAC
CCCATCGGAACAAGAATGAACGGTCAGTCTAGGCGTACAGACTACGGCAT
CACATGGAAAGGATTGGAACGTCTTTACTGACATATACTAGGTGTCGTGG
CTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCG
ATGCATGTGTAG back to topCoding sequence (CDS) from alignment at An12:965747..966358+ >CBS51388_007707-T1 ID=CBS51388_007707-T1|Name=CBS51388_007707-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1584bp|location=Sequence derived from alignment at An12:965747..966358+ (Aspergillus niger CBS 513.88)
ATGATTCAATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGC
CGTTGTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTG
GTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGAC
AGCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCG
CCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTT
CGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGA
GACCCCATCGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGG
ACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGA
TTCAATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTT
GTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGA
CCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCA
GCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCAT
GCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGAT
CGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACC
CCATCGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGA
CAGTGGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGATTCA
ATTAAAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCG
AGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGC
ATCGTGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAA
CAACGTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCATGCCG
TCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGATCGTC
AAGTTCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCAT
CGGAACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGT
GGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGATGATTCAATTA
AAGACAATGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTG
CGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTTGGTGACCGCATCG
TGGTCGTGGTCCAGAAGCAACGAAATTTCGGCCCCGACAGCAGCAACAAC
GTCGGTATTGCAAACAAGGTTCGCCGAGGAGACATTCGCCATGCCGTCGT
CGTCCGCGCGGCCAAGGAAATGCAGCGTCCGGATGGTTCGATCGTCAAGT
TCGATGATAACGCCTGTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGA
ACAAGAATGAACGGTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTC
GAAGATCCTGTCGTTGGCGCCGATGCATGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015934 | large ribosomal subunit |
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265HP0 |
| DBxref | InterPro:IPR019972 |
| DBxref | InterPro:IPR005745 |
| DBxref | InterPro:IPR036853 |
| DBxref | InterPro:IPR000218 |
| DBxref | PFAM:PF00238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:965747..966358 + |
|
