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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:966548..967168- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007708-T1 ID=CBS51388_007708-T1|Name=CBS51388_007708-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=621bp|location=Sequence derived from alignment at An12:966548..967168- (Aspergillus niger CBS 513.88)
ATGGTAAGTTTTGATCTCTACACTTTGGTCGGACCTTCTGCTAACGTCTA
CAGTTCCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGA
TGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGC
GTCTATCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGAC
CCAGGATGTGGGATCTGATCCTACGGTTTGTCTCCCGGGTTTCTGTGATC
ATTGTGGGGAAGAGATTACCTGCTTCGTCTGTGACATATCCTCCGAGGAC
TCCTGGTCCGAAGAGGATTATGATGGCTTTTCGTCGTCATGAGGTCCTGC
GAGCGCCGCGCTCGCGTCATGGATACATTCCAAGTTGTCTTGAAATTTCC
GTGGCTAACCCACTCTTTCCCTAGCTTCCTCGTTCCAACAAGCTCTGCCC
GAGCTGCGGCGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCG
CTGAAACGGGAATGGTAAGCCTTCATGCCGGTTTACACCGCATCCATGAA
GGGATCGGCTGACGCTTACTTTCCAGAAACTTTACTACGTCTGTTGCGCG
TGCGGCAATGTTTTCGTCTAA back to topCoding sequence (CDS) from alignment at An12:966548..967168- >CBS51388_007708-T1 ID=CBS51388_007708-T1|Name=CBS51388_007708-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1080bp|location=Sequence derived from alignment at An12:966548..967168- (Aspergillus niger CBS 513.88)
AAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCGTCTAACTTCC
TCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAAGCAGTCTTCT
TCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGATGGTAAGTTTTGAT
CTCTACACTTTGGTCGGACCTTCTGCTAACGTCTACAGTTCCAACTTGCT
CTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTCACCTGCCGAA
CCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTATCAAAACAAA
CTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGGATGTGGGATC
TGATCCTACGAAACTTTACTACGTCTGTTGCGCGTGCGGCAATGTTTTCG
TCTAACTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGGCGAAGCCGAA
GCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGGGAATGATGGT
AAGTTTTGATCTCTACACTTTGGTCGGACCTTCTGCTAACGTCTACAGTT
CCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCGGTTGATGTTC
ACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCTACTGCGTCTA
TCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGTGTGACCCAGG
ATGTGGGATCTGATCCTACGAAACTTTACTACGTCTGTTGCGCGTGCGGC
AATGTTTTCGTCTAACTTCCTCGTTCCAACAAGCTCTGCCCGAGCTGCGG
CGAAGCCGAAGCAGTCTTCTTCCAGTCGCAACAGCGTTCCGCTGAAACGG
GAATGATGGTAAGTTTTGATCTCTACACTTTGGTCGGACCTTCTGCTAAC
GTCTACAGTTCCAACTTGCTCTACCCGAAGGAAGACCGCATCAACAACCG
GTTGATGTTCACCTGCCGAACCTGCCATGTCGGCGAGCCCGCCACCTCCT
ACTGCGTCTATCAAAACAAACTCAACACTCAAGTCGGAGATACCGCCGGT
GTGACCCAGGATGTGGGATCTGATCCTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006379 | mRNA cleavage |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092654O3 |
| DBxref | InterPro:IPR034012 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | PFAM:PF01096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:966548..967168 - |
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