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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1011927..1013828- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007722-T1 ID=CBS51388_007722-T1|Name=CBS51388_007722-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1902bp|location=Sequence derived from alignment at An12:1011927..1013828- (Aspergillus niger CBS 513.88)
ATGCCATCGGCCGACGCTTCTTCGTCCGCCCGCCCCAACGGGACCAGCTC
GCGGTCTGATCAGCTCGCTTACTACAAGGCGCAATATGAACAGCTAGAAG
CCGAACTGGCGGAATTCCAGGCTTCCAGCCGGGAACTGGAAGCGGAGCTG
GAGAAGGATATCGAGGCGTCAGAGAAGCGGGAGCGGGTGTTGAAGGAGAA
GCTGGAAAACCTGAGATACGAGGTCGACGAATGGAAGGTGAGCCTGACGT
GTTCCTGGTCCCTCAAACTTCCCTCGTGGGAGGCTTGAAGATCTCCAAGG
TTAACGGGAACCCCCTTGCAGTCCAAATTCAAGCAGTCCAAATCCGAGGC
CAACACGGCCCAGAATTCGCTGCAGAAGGAAATCACAACCTTGCGAGACG
CCAACCGAACCCTGCAGTTGAGACTACGTGATACTGAAGTTGCGAACGAT
GATTATGAGCGTCAGGCCCGCCACACCACTTCGTCCCTGGAGGATATGGA
GCAGAAATATAACATGGCCATTGAGCGCAGCGTCCTGTTGGAAGACGAGG
TGAAGGCCGGAGAAAAAGAGCGCGAGGCTCTCCGCATTCAGTGCCAGCGT
CTTCGGGATGAACTATCGGAGCAGAAACTCGACAACGAAATTCTTCAGGA
GAAGCTTCGTCATGAGCAGTACGGCGGTCGGCGCAAGAAGCCGACGCCTT
TGTCCCGCACGGCATCGTCAACACCGCAGGCCCCCGAGATTTTCGATCGC
TCCCCGGGCACGTCCGCTGTGTCATCTCCCCTATTTGTTCGTACGCCGAT
GAAGTCCTCGTTGATGGGTGTTACTGCAGCTCCTCCATCGCCACCAATGT
CCGAGACGTCGGTCAGTGTGACCAACATGATGGCCAACATGCGCAAGACA
GTTCATGCTACTGCTGGATTTCCGCTCCAGAAAGCGTCAGGATCCGAGTC
TCTCATGGGCTCCCGGTCGATGTATGACGCCAGACCCAACAAGTCTTCCC
GATCTCGCACCACTGGCAATGCAAGCAACAATACCCGTTCTTCCGCATCC
ACAGCCACGTCCCGCATTAGTTTGACGAAGCCCGCCAATTTTGGCAATTC
GATCAGCTCGATCAATTCTCCGCGAAGCGAGAATGATAACCAACAGAGCA
ATCTGCCCAAATCGGGTTCCTTGTTCCAGATTCGGGGTCTCATTGGCAAG
ATGCAGCAGCTGGAAGAAAGAGTCCAGTCAGCCAAATCCAAGCTGCCTCC
CCCGTCCGACTCGCCGTCTCGCACCTCTTCGCGTTCCGGATCGATCTCCG
TGAATGGGGGAAGTCCCGTTGCTTCCACTATCACTATGCGCCGAAACTCG
CGCAAGCGGTTGAGTGGTAGCAGTTTCAGTTCGTCGATCCGGGATAATGA
TGGCACGGCATCATCTGTCTCCAACAACCGACCATCCTTTGGCACCCGCA
ATGGAGGTGACAGCCGACCTAGCAGCCGTACTAGCTACTCCAGCGCCTTC
AGCCAAAGTACACACCCAAGCATCGCGCCGTCGACACGCCCAGAGAGCCG
CCAGAGCCGGACTAAGACTCCTTTGGGACATTATTCGACGAACCCTACCA
CGGAGAGCCGGCGGCCGCGGTCGTCGCTGAGCAATCCGTCGGGGCAGAAT
GGCTCGGTGAACGGCATGTCGAACATCGATGAAGATGAGGACCAAAGCCT
AGCGTTCCGCTTGTCCGTTCAAGCCAAGATTAGCGAAGCCCGCGAGACCC
GCTTCCCGCCATACTCTACGGCGACTCTGCCGAAAAGACGGACACCCAGC
GGCATCCCGGCGCCACGCACCTTGCGAACCAGCACTGGCGGAGGCATGGC
ATCCCCAGACCCGAAGGCCACCAAGATTGGCGACCTCGGCGAGACATTCT
AA back to topCoding sequence (CDS) from alignment at An12:1011927..1013828- >CBS51388_007722-T1 ID=CBS51388_007722-T1|Name=CBS51388_007722-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3636bp|location=Sequence derived from alignment at An12:1011927..1013828- (Aspergillus niger CBS 513.88)
TCCAAATTCAAGCAGTCCAAATCCGAGGCCAACACGGCCCAGAATTCGCT
GCAGAAGGAAATCACAACCTTGCGAGACGCCAACCGAACCCTGCAGTTGA
GACTACGTGATACTGAAGTTGCGAACGATGATTATGAGCGTCAGGCCCGC
CACACCACTTCGTCCCTGGAGGATATGGAGCAGAAATATAACATGGCCAT
TGAGCGCAGCGTCCTGTTGGAAGACGAGGTGAAGGCCGGAGAAAAAGAGC
GCGAGGCTCTCCGCATTCAGTGCCAGCGTCTTCGGGATGAACTATCGGAG
CAGAAACTCGACAACGAAATTCTTCAGGAGAAGCTTCGTCATGAGCAGTA
CGGCGGTCGGCGCAAGAAGCCGACGCCTTTGTCCCGCACGGCATCGTCAA
CACCGCAGGCCCCCGAGATTTTCGATCGCTCCCCGGGCACGTCCGCTGTG
TCATCTCCCCTATTTGTTCGTACGCCGATGAAGTCCTCGTTGATGGGTGT
TACTGCAGCTCCTCCATCGCCACCAATGTCCGAGACGTCGGTCAGTGTGA
CCAACATGATGGCCAACATGCGCAAGACAGTTCATGCTACTGCTGGATTT
CCGCTCCAGAAAGCGTCAGGATCCGAGTCTCTCATGGGCTCCCGGTCGAT
GTATGACGCCAGACCCAACAAGTCTTCCCGATCTCGCACCACTGGCAATG
CAAGCAACAATACCCGTTCTTCCGCATCCACAGCCACGTCCCGCATTAGT
TTGACGAAGCCCGCCAATTTTGGCAATTCGATCAGCTCGATCAATTCTCC
GCGAAGCGAGAATGATAACCAACAGAGCAATCTGCCCAAATCGGGTTCCT
TGTTCCAGATTCGGGGTCTCATTGGCAAGATGCAGCAGCTGGAAGAAAGA
GTCCAGTCAGCCAAATCCAAGCTGCCTCCCCCGTCCGACTCGCCGTCTCG
CACCTCTTCGCGTTCCGGATCGATCTCCGTGAATGGGGGAAGTCCCGTTG
CTTCCACTATCACTATGCGCCGAAACTCGCGCAAGCGGTTGAGTGGTAGC
AGTTTCAGTTCGTCGATCCGGGATAATGATGGCACGGCATCATCTGTCTC
CAACAACCGACCATCCTTTGGCACCCGCAATGGAGGTGACAGCCGACCTA
GCAGCCGTACTAGCTACTCCAGCGCCTTCAGCCAAAGTACACACCCAAGC
ATCGCGCCGTCGACACGCCCAGAGAGCCGCCAGAGCCGGACTAAGACTCC
TTTGGGACATTATTCGACGAACCCTACCACGGAGAGCCGGCGGCCGCGGT
CGTCGCTGAGCAATCCGTCGGGGCAGAATGGCTCGGTGAACGGCATGTCG
AACATCGATGAAGATGAGGACCAAAGCCTAGCGTTCCGCTTGTCCGTTCA
AGCCAAGATTAGCGAAGCCCGCGAGACCCGCTTCCCGCCATACTCTACGG
CGACTCTGCCGAAAAGACGGACACCCAGCGGCATCCCGGCGCCACGCACC
TTGCGAACCAGCACTGGCGGAGGCATGGCATCCCCAGACCCGAAGGCCAC
CAAGATTGGCGACCTCGGCGAGACATTCTAAATGCCATCGGCCGACGCTT
CTTCGTCCGCCCGCCCCAACGGGACCAGCTCGCGGTCTGATCAGCTCGCT
TACTACAAGGCGCAATATGAACAGCTAGAAGCCGAACTGGCGGAATTCCA
GGCTTCCAGCCGGGAACTGGAAGCGGAGCTGGAGAAGGATATCGAGGCGT
CAGAGAAGCGGGAGCGGGTGTTGAAGGAGAAGCTGGAAAACCTGAGATAC
GAGGTCGACGAATGGAAGTCCAAATTCAAGCAGTCCAAATCCGAGGCCAA
CACGGCCCAGAATTCGCTGCAGAAGGAAATCACAACCTTGCGAGACGCCA
ACCGAACCCTGCAGTTGAGACTACGTGATACTGAAGTTGCGAACGATGAT
TATGAGCGTCAGGCCCGCCACACCACTTCGTCCCTGGAGGATATGGAGCA
GAAATATAACATGGCCATTGAGCGCAGCGTCCTGTTGGAAGACGAGGTGA
AGGCCGGAGAAAAAGAGCGCGAGGCTCTCCGCATTCAGTGCCAGCGTCTT
CGGGATGAACTATCGGAGCAGAAACTCGACAACGAAATTCTTCAGGAGAA
GCTTCGTCATGAGCAGTACGGCGGTCGGCGCAAGAAGCCGACGCCTTTGT
CCCGCACGGCATCGTCAACACCGCAGGCCCCCGAGATTTTCGATCGCTCC
CCGGGCACGTCCGCTGTGTCATCTCCCCTATTTGTTCGTACGCCGATGAA
GTCCTCGTTGATGGGTGTTACTGCAGCTCCTCCATCGCCACCAATGTCCG
AGACGTCGGTCAGTGTGACCAACATGATGGCCAACATGCGCAAGACAGTT
CATGCTACTGCTGGATTTCCGCTCCAGAAAGCGTCAGGATCCGAGTCTCT
CATGGGCTCCCGGTCGATGTATGACGCCAGACCCAACAAGTCTTCCCGAT
CTCGCACCACTGGCAATGCAAGCAACAATACCCGTTCTTCCGCATCCACA
GCCACGTCCCGCATTAGTTTGACGAAGCCCGCCAATTTTGGCAATTCGAT
CAGCTCGATCAATTCTCCGCGAAGCGAGAATGATAACCAACAGAGCAATC
TGCCCAAATCGGGTTCCTTGTTCCAGATTCGGGGTCTCATTGGCAAGATG
CAGCAGCTGGAAGAAAGAGTCCAGTCAGCCAAATCCAAGCTGCCTCCCCC
GTCCGACTCGCCGTCTCGCACCTCTTCGCGTTCCGGATCGATCTCCGTGA
ATGGGGGAAGTCCCGTTGCTTCCACTATCACTATGCGCCGAAACTCGCGC
AAGCGGTTGAGTGGTAGCAGTTTCAGTTCGTCGATCCGGGATAATGATGG
CACGGCATCATCTGTCTCCAACAACCGACCATCCTTTGGCACCCGCAATG
GAGGTGACAGCCGACCTAGCAGCCGTACTAGCTACTCCAGCGCCTTCAGC
CAAAGTACACACCCAAGCATCGCGCCGTCGACACGCCCAGAGAGCCGCCA
GAGCCGGACTAAGACTCCTTTGGGACATTATTCGACGAACCCTACCACGG
AGAGCCGGCGGCCGCGGTCGTCGCTGAGCAATCCGTCGGGGCAGAATGGC
TCGGTGAACGGCATGTCGAACATCGATGAAGATGAGGACCAAAGCCTAGC
GTTCCGCTTGTCCGTTCAAGCCAAGATTAGCGAAGCCCGCGAGACCCGCT
TCCCGCCATACTCTACGGCGACTCTGCCGAAAAGACGGACACCCAGCGGC
ATCCCGGCGCCACGCACCTTGCGAACCAGCACTGGCGGAGGCATGGCATC
CCCAGACCCGAAGGCCACCAAGATTGGCGACCTCGGCGAGACATTCTAAA
TGCCATCGGCCGACGCTTCTTCGTCCGCCCGCCCCAACGGGACCAGCTCG
CGGTCTGATCAGCTCGCTTACTACAAGGCGCAATATGAACAGCTAGAAGC
CGAACTGGCGGAATTCCAGGCTTCCAGCCGGGAACTGGAAGCGGAGCTGG
AGAAGGATATCGAGGCGTCAGAGAAGCGGGAGCGGGTGTTGAAGGAGAAG
CTGGAAAACCTGAGATACGAGGTCGACGAATGGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006964 |
| DBxref | PFAM:PF04880 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1011927..1013828 - |
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