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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1023472..1024989- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007727-T1 ID=CBS51388_007727-T1|Name=CBS51388_007727-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1518bp|location=Sequence derived from alignment at An12:1023472..1024989- (Aspergillus niger CBS 513.88)
ATGGCTGCCAGCAATGACCTCCGGGGCTGGGTCATGAGCGCCGTGTCGGG
CGTGGGTAAGTCTACCTTCTGTATAGTATTTAGTTTCACTAGCTAACATA
GTCCAGCTTGTGTCTTGGGGTCGGCTGTCATTTGTGTGGATCTTGTTTTA
CGGCGATTGTCTCGCCGTAAAAGCTTCCAGATTGTCCATAACAATGGCTT
CTTATCTGCGTCTCTGAGTCTGAGCGCGGGCGTTATGGTATGTCTCTTTG
ACCAGTTGACCCTAATGTTGCTAGCATGCTGACCGCGCTAGCTTTACACT
TCTCTCTATAGCATGCTGCCTACTTCTCATCGGTACCTGACTCGGGCTGG
CTTGTCCCCCTCGCTCGCTGCATACGTGCTTATCGGTCTCTTTCTGGCGG
GCGCGGTCGTCATCCGTTTGGCATCGGCACTATTGCATCGCTACATACCG
TCACATGTCGTCGATTGTGCTCATACCCATGAGCCACACCCCACCTCTGG
TCATGAACACGGGGGCAAGCCAGACGGCCATTCACACTCCCACGGCCCTA
ACCACCTGAATGAGCGAACTCCTCTTTTGACGCACAAGTCTTCCCCGGCC
ACTGTGACCGTCCCTGCTGCTGGAGACGACCCAGGCGCACTTCTGCGAAG
GGAATCCCTGCGTATCCGCTTCACACGACGCCTCAGTCGTTTGGTTGGCG
GAGTCAAGTCACAATGCGACGAGAATGGCCCTTGTTTTGGCTTTTCGCAG
GCGTGCGGGCACGAATGCACCAAGACCCTCGAGGGACCGGAAATCTCTGT
CCTGGATGACGGCACCGTGCGCCCGCCGCTGCCGCACCCCCACAGCATAT
CCGTGCAAGTGGACTCAGCACAATTGGATGATCTTGAGGCAAACCTACCA
TCCTCGCAAATTCGACCTCAAGAGGCGAGTTCCTCTTCGTCCCGTACTGG
GCTTCTTGACGACCAGGATGTGGCATCTGAGGACGGAACTAAGCCGCCAC
CCAATCCCCAACACCATCACCATGTGCCACAGAACGCCTTTCTCTCCATC
GGTCTGCAGACATCGATGGCGATTGCTCTGCACAAGTTGCCGGAGGGGTT
TATCACCTACGCCACGAACCATGCGAGCCCGACTCTAGGCCTCACGGTTT
TCTTGGCGCTTTTCATCCACAACATCAGCGAAGGATTCGCTATGGCCTTA
CCTCTGTATCTCGCGCTGCATTCGCGCGGCTGGGCGATGTTCTGGTCAAG
TTTGCTAGGTGGTATCAGCCAACCCGCAGGCGCTGCGCTGGCAGCTCTCT
GGATCTGGGGTGCTCGGCGTGCTAATGGTGACGACACCGCTGGCCCGTCC
TGGGGTGTCTACGGCGGTATGTTTGCCGCGACGGCGGGAGTTATGATCTC
GGTTGCTCTGCAGCTGTTCAGCGAAGGCCTTACCCTAACTCACAATCGGG
GATTGTGCACTGGGTTCGCTATCGGAGGAATGGTCCTGATGGGGCTCAGT
TTCGCCCTGACCGCATAG back to topCoding sequence (CDS) from alignment at An12:1023472..1024989- >CBS51388_007727-T1 ID=CBS51388_007727-T1|Name=CBS51388_007727-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4239bp|location=Sequence derived from alignment at An12:1023472..1024989- (Aspergillus niger CBS 513.88)
CTTTACACTTCTCTCTATAGCATGCTGCCTACTTCTCATCGGTACCTGAC
TCGGGCTGGCTTGTCCCCCTCGCTCGCTGCATACGTGCTTATCGGTCTCT
TTCTGGCGGGCGCGGTCGTCATCCGTTTGGCATCGGCACTATTGCATCGC
TACATACCGTCACATGTCGTCGATTGTGCTCATACCCATGAGCCACACCC
CACCTCTGGTCATGAACACGGGGGCAAGCCAGACGGCCATTCACACTCCC
ACGGCCCTAACCACCTGAATGAGCGAACTCCTCTTTTGACGCACAAGTCT
TCCCCGGCCACTGTGACCGTCCCTGCTGCTGGAGACGACCCAGGCGCACT
TCTGCGAAGGGAATCCCTGCGTATCCGCTTCACACGACGCCTCAGTCGTT
TGGTTGGCGGAGTCAAGTCACAATGCGACGAGAATGGCCCTTGTTTTGGC
TTTTCGCAGGCGTGCGGGCACGAATGCACCAAGACCCTCGAGGGACCGGA
AATCTCTGTCCTGGATGACGGCACCGTGCGCCCGCCGCTGCCGCACCCCC
ACAGCATATCCGTGCAAGTGGACTCAGCACAATTGGATGATCTTGAGGCA
AACCTACCATCCTCGCAAATTCGACCTCAAGAGGCGAGTTCCTCTTCGTC
CCGTACTGGGCTTCTTGACGACCAGGATGTGGCATCTGAGGACGGAACTA
AGCCGCCACCCAATCCCCAACACCATCACCATGTGCCACAGAACGCCTTT
CTCTCCATCGGTCTGCAGACATCGATGGCGATTGCTCTGCACAAGTTGCC
GGAGGGGTTTATCACCTACGCCACGAACCATGCGAGCCCGACTCTAGGCC
TCACGGTTTTCTTGGCGCTTTTCATCCACAACATCAGCGAAGGATTCGCT
ATGGCCTTACCTCTGTATCTCGCGCTGCATTCGCGCGGCTGGGCGATGTT
CTGGTCAAGTTTGCTAGGTGGTATCAGCCAACCCGCAGGCGCTGCGCTGG
CAGCTCTCTGGATCTGGGGTGCTCGGCGTGCTAATGGTGACGACACCGCT
GGCCCGTCCTGGGGTGTCTACGGCGGTATGTTTGCCGCGACGGCGGGAGT
TATGATCTCGGTTGCTCTGCAGCTGTTCAGCGAAGGCCTTACCCTAACTC
ACAATCGGGGATTGTGCACTGGGTTCGCTATCGGAGGAATGGTCCTGATG
GGGCTCAGTTTCGCCCTGACCGCATAGCTTGTGTCTTGGGGTCGGCTGTC
ATTTGTGTGGATCTTGTTTTACGGCGATTGTCTCGCCGTAAAAGCTTCCA
GATTGTCCATAACAATGGCTTCTTATCTGCGTCTCTGAGTCTGAGCGCGG
GCGTTATGATGGCTGCCAGCAATGACCTCCGGGGCTGGGTCATGAGCGCC
GTGTCGGGCGTGGCTTTACACTTCTCTCTATAGCATGCTGCCTACTTCTC
ATCGGTACCTGACTCGGGCTGGCTTGTCCCCCTCGCTCGCTGCATACGTG
CTTATCGGTCTCTTTCTGGCGGGCGCGGTCGTCATCCGTTTGGCATCGGC
ACTATTGCATCGCTACATACCGTCACATGTCGTCGATTGTGCTCATACCC
ATGAGCCACACCCCACCTCTGGTCATGAACACGGGGGCAAGCCAGACGGC
CATTCACACTCCCACGGCCCTAACCACCTGAATGAGCGAACTCCTCTTTT
GACGCACAAGTCTTCCCCGGCCACTGTGACCGTCCCTGCTGCTGGAGACG
ACCCAGGCGCACTTCTGCGAAGGGAATCCCTGCGTATCCGCTTCACACGA
CGCCTCAGTCGTTTGGTTGGCGGAGTCAAGTCACAATGCGACGAGAATGG
CCCTTGTTTTGGCTTTTCGCAGGCGTGCGGGCACGAATGCACCAAGACCC
TCGAGGGACCGGAAATCTCTGTCCTGGATGACGGCACCGTGCGCCCGCCG
CTGCCGCACCCCCACAGCATATCCGTGCAAGTGGACTCAGCACAATTGGA
TGATCTTGAGGCAAACCTACCATCCTCGCAAATTCGACCTCAAGAGGCGA
GTTCCTCTTCGTCCCGTACTGGGCTTCTTGACGACCAGGATGTGGCATCT
GAGGACGGAACTAAGCCGCCACCCAATCCCCAACACCATCACCATGTGCC
ACAGAACGCCTTTCTCTCCATCGGTCTGCAGACATCGATGGCGATTGCTC
TGCACAAGTTGCCGGAGGGGTTTATCACCTACGCCACGAACCATGCGAGC
CCGACTCTAGGCCTCACGGTTTTCTTGGCGCTTTTCATCCACAACATCAG
CGAAGGATTCGCTATGGCCTTACCTCTGTATCTCGCGCTGCATTCGCGCG
GCTGGGCGATGTTCTGGTCAAGTTTGCTAGGTGGTATCAGCCAACCCGCA
GGCGCTGCGCTGGCAGCTCTCTGGATCTGGGGTGCTCGGCGTGCTAATGG
TGACGACACCGCTGGCCCGTCCTGGGGTGTCTACGGCGGTATGTTTGCCG
CGACGGCGGGAGTTATGATCTCGGTTGCTCTGCAGCTGTTCAGCGAAGGC
CTTACCCTAACTCACAATCGGGGATTGTGCACTGGGTTCGCTATCGGAGG
AATGGTCCTGATGGGGCTCAGTTTCGCCCTGACCGCATAGCTTGTGTCTT
GGGGTCGGCTGTCATTTGTGTGGATCTTGTTTTACGGCGATTGTCTCGCC
GTAAAAGCTTCCAGATTGTCCATAACAATGGCTTCTTATCTGCGTCTCTG
AGTCTGAGCGCGGGCGTTATGATGGCTGCCAGCAATGACCTCCGGGGCTG
GGTCATGAGCGCCGTGTCGGGCGTGGCTTTACACTTCTCTCTATAGCATG
CTGCCTACTTCTCATCGGTACCTGACTCGGGCTGGCTTGTCCCCCTCGCT
CGCTGCATACGTGCTTATCGGTCTCTTTCTGGCGGGCGCGGTCGTCATCC
GTTTGGCATCGGCACTATTGCATCGCTACATACCGTCACATGTCGTCGAT
TGTGCTCATACCCATGAGCCACACCCCACCTCTGGTCATGAACACGGGGG
CAAGCCAGACGGCCATTCACACTCCCACGGCCCTAACCACCTGAATGAGC
GAACTCCTCTTTTGACGCACAAGTCTTCCCCGGCCACTGTGACCGTCCCT
GCTGCTGGAGACGACCCAGGCGCACTTCTGCGAAGGGAATCCCTGCGTAT
CCGCTTCACACGACGCCTCAGTCGTTTGGTTGGCGGAGTCAAGTCACAAT
GCGACGAGAATGGCCCTTGTTTTGGCTTTTCGCAGGCGTGCGGGCACGAA
TGCACCAAGACCCTCGAGGGACCGGAAATCTCTGTCCTGGATGACGGCAC
CGTGCGCCCGCCGCTGCCGCACCCCCACAGCATATCCGTGCAAGTGGACT
CAGCACAATTGGATGATCTTGAGGCAAACCTACCATCCTCGCAAATTCGA
CCTCAAGAGGCGAGTTCCTCTTCGTCCCGTACTGGGCTTCTTGACGACCA
GGATGTGGCATCTGAGGACGGAACTAAGCCGCCACCCAATCCCCAACACC
ATCACCATGTGCCACAGAACGCCTTTCTCTCCATCGGTCTGCAGACATCG
ATGGCGATTGCTCTGCACAAGTTGCCGGAGGGGTTTATCACCTACGCCAC
GAACCATGCGAGCCCGACTCTAGGCCTCACGGTTTTCTTGGCGCTTTTCA
TCCACAACATCAGCGAAGGATTCGCTATGGCCTTACCTCTGTATCTCGCG
CTGCATTCGCGCGGCTGGGCGATGTTCTGGTCAAGTTTGCTAGGTGGTAT
CAGCCAACCCGCAGGCGCTGCGCTGGCAGCTCTCTGGATCTGGGGTGCTC
GGCGTGCTAATGGTGACGACACCGCTGGCCCGTCCTGGGGTGTCTACGGC
GGTATGTTTGCCGCGACGGCGGGAGTTATGATCTCGGTTGCTCTGCAGCT
GTTCAGCGAAGGCCTTACCCTAACTCACAATCGGGGATTGTGCACTGGGT
TCGCTATCGGAGGAATGGTCCTGATGGGGCTCAGTTTCGCCCTGACCGCA
TAGCTTGTGTCTTGGGGTCGGCTGTCATTTGTGTGGATCTTGTTTTACGG
CGATTGTCTCGCCGTAAAAGCTTCCAGATTGTCCATAACAATGGCTTCTT
ATCTGCGTCTCTGAGTCTGAGCGCGGGCGTTATGATGGCTGCCAGCAATG
ACCTCCGGGGCTGGGTCATGAGCGCCGTGTCGGGCGTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030001 | metal ion transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046873 | metal ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003689 |
| DBxref | PFAM:PF02535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1023472..1024989 - |
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