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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1122278..1123563+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007768-T1 ID=CBS51388_007768-T1|Name=CBS51388_007768-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1286bp|location=Sequence derived from alignment at An12:1122278..1123563+ (Aspergillus niger CBS 513.88)
ATGACTACGGGTATGTATCTATATTGATTGAATCTGAGAACCTCTGTACT
GACTACTTTATAGCTCACAGGCCCACGTTCGATCCCGTATGTACCCCCGA
TCATCTGCTCAGCGCATGAAGCTCATTGAAACAGGCACAAGGAAAGGAGG
CCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCAC
CTGAAGACACGGTAAGTGGTATGACAATATGTCTGCGACAATTTCTGACA
TGTCCAAGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGA
TCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGA
ACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGC
CAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGA
TCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGATG
CAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGGTCAGAC
TCGCGAATATATTAGATTCGCGCGATAATACTGACAGGTTACAGTGACGA
TGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGA
AAGAGAGGCTCGAGCAGAAGGAGAAAGAGGTTTGTACATTGGTTTTTGAC
TTTGACATGGTTTACTGATATTTGTCAGGAACGCGAGCGTGCTGCGCAAG
AAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAAT
CCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAA
GAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACG
TAAGTGCTTGCTTTTTTATCATCTATTATGCTATGATACTAATCTTGCAT
GCAGGATCTGTTGCGATCGGACTTCCACAAGAGATTCATGGTGAGTTGGT
ACTGTTGCAAGAGTCAATGAATTTACTAATTTGAGCAGTCAAAATACGTC
CGCTAAAATCGTGTCCGACAAACGTACCCACTCCTTACAGCAGTCACTGT
GATGACTGTTTGTCCTACCCTAGAGTCGTCAATCGGTCCCCAACTCATAC
CAGATACAGCATCGTGGTGGATTTGACTTCCAGATCAGCATGCGAATAGA
GAAGCAGTACAAGCCAGTATATGCTTCCTACTACAGCACAGGGAAGAACG
CTCGACAACACGAACGAGAGTGAATGGGTGATTTAA back to topCoding sequence (CDS) from alignment at An12:1122278..1123563+ >CBS51388_007768-T1 ID=CBS51388_007768-T1|Name=CBS51388_007768-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7155bp|location=Sequence derived from alignment at An12:1122278..1123563+ (Aspergillus niger CBS 513.88)
ATGACTACGGCTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGC
CCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACC
TGAAGACACGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGC
GATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAA
GAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGC
GCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAA
GATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGA
TGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACG
ATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAG
AAAGAGAGGCTCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCA
AGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTA
ATCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTC
AAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAA
CGATCTGTTGCGATCGGACTTCCACAAGAGATTCATGATACAGCATCGTG
GTGGATTTGACTTCCAGATCAGCATGCGAATAGAGAAGCAGTACAAGCCA
GGAAGAACGCTCGACAACACGAACGAGAGTGAATGGGTGATTTAAATGAC
TACGGCTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCC
GCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAG
ACACGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCT
GCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACG
GAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAG
TTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCC
AGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAG
ATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGAA
GAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGA
GAGGCTCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAG
AGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCT
CAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAA
CCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATC
TGTTGCGATCGGACTTCCACAAGAGATTCATGATACAGCATCGTGGTGGA
TTTGACTTCCAGATCAGCATGCGAATAGAGAAGCAGTACAAGCCAGGAAG
AACGCTCGACAACACGAACGAGAGTGAATGGGTGATTTAAATGACTACGG
CTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGGC
CCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACG
TCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCG
CCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTT
CCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGA
AGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAG
CCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCC
GATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGAAGAGGA
CGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGC
TCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAG
CAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGA
CTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGG
CCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTTG
CGATCGGACTTCCACAAGAGATTCATGATACAGCATCGTGGTGGATTTGA
CTTCCAGATCAGCATGCGAATAGAGAAGCAGTACAAGCCAGGAAGAACGC
TCGACAACACGAACGAGAGTGAATGGGTGATTTAAATGACTACGGCTCAC
AGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGC
GTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGTCAAT
TCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAG
CTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGT
GGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTG
GTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAA
CGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGA
ATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGAAGAGGACGAAG
CTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAG
CAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCG
CGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCA
ATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGT
GGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATC
GGACTTCCACAAGAGATTCATGATACAGCATCGTGGTGGATTTGACTTCC
AGATCAGCATGCGAATAGAGAAGCAGTACAAGCCAGGAAGAACGCTCGAC
AACACGAACGAGAGTGAATGGGTGATTTAAATGACTACGGCTCACAGGCC
CACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACC
ACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGTCAATTCGGT
CAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCT
CCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACG
AGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCA
CCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACG
ACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGG
AGGAGGATAGCAGTGAAGATGAAAGTGACGATGAAGAGGACGAAGCTGCT
GAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAA
GGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGG
TCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTG
AAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTAC
AGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATCGGACT
TCCACAAGAGATTCATGATACAGCATCGTGGTGGATTTGACTTCCAGATC
AGCATGCGAATAGAGAAGCAGTACAAGCCAGGAAGAACGCTCGACAACAC
GAACGAGAGTGAATGGGTGATTTAAATGACTACGGCTCACAGGCCCACGT
TCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAG
CGTCTTCTCCCGGCTTATACGCACCTGAAGACACGTCAATTCGGTCAGGG
TAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGG
CGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCT
AAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGG
CGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAA
TACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAG
GATAGCAGTGAAGATGAAAGTGACGATGAAGAGGACGAAGCTGCTGAATT
GATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGA
AAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGAT
ATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCG
GAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAG
ACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATCGGACTTCCAC
AAGAGATTCATGATACAGCATCGTGGTGGATTTGACTTCCAGATCAGCAT
GCGAATAGAGAAGCAGTACAAGCCAGGAAGAACGCTCGACAACACGAACG
AGAGTGAATGGGTGATTTAAATGACTACGGCTCACAGGCCCACGTTCGAT
CCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCT
TCTCCCGGCTTATACGCACCTGAAGACACGTCAATTCGGTCAGGGTAGTG
AAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAG
GCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGT
CGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTG
ATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTA
GAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAG
CAGTGAAGATGAAAGTGACGATGAAGAGGACGAAGCTGCTGAATTGATGC
GCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAG
GAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGC
TCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAGAT
GGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACAAG
AGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATCGGACTTCCACAAGAG
ATTCATGATACAGCATCGTGGTGGATTTGACTTCCAGATCAGCATGCGAA
TAGAGAAGCAGTACAAGCCAGGAAGAACGCTCGACAACACGAACGAGAGT
GAATGGGTGATTTAAATGACTACGGCTCACAGGCCCACGTTCGATCCCGC
ACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCC
CGGCTTATACGCACCTGAAGACACGTCAATTCGGTCAGGGTAGTGAAGTC
GAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGC
TCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGA
CCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCA
GGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGA
GACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTG
AAGATGAAAGTGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAG
CTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGGAACG
CGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAG
GAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGAC
GATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGG
CAAAGAGTTTGTTAACGATCTGTTGCGATCGGACTTCCACAAGAGATTCA
TGATACAGCATCGTGGTGGATTTGACTTCCAGATCAGCATGCGAATAGAG
AAGCAGTACAAGCCAGGAAGAACGCTCGACAACACGAACGAGAGTGAATG
GGTGATTTAAATGACTACGGCTCACAGGCCCACGTTCGATCCCGCACAAG
GAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCT
TATACGCACCTGAAGACACGTCAATTCGGTCAGGGTAGTGAAGTCGAAAC
CCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATT
TCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCC
ACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGAC
AGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTC
GAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGAT
GAAAGTGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGA
GAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGGAACGCGAGC
GTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAAC
CCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGA
TGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAG
AGTTTGTTAACGATCTGTTGCGATCGGACTTCCACAAGAGATTCATGATA
CAGCATCGTGGTGGATTTGACTTCCAGATCAGCATGCGAATAGAGAAGCA
GTACAAGCCAGGAAGAACGCTCGACAACACGAACGAGAGTGAATGGGTGA
TTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006973 |
| DBxref | PFAM:PF04889 |
| Product | complexed with cef1p |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1122278..1123563 + |
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