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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1195632..1196936- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007793-T1 ID=CBS51388_007793-T1|Name=CBS51388_007793-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1305bp|location=Sequence derived from alignment at An12:1195632..1196936- (Aspergillus niger CBS 513.88)
ATGACTCCCAAAGCTTCCACCCGGATCGCATCGGTGCGCCGTCTCAACAA
AGAAGGCCCCGGAGAGCGATCCCTCGCAGAGTGGTGGGCCAACGAACGCG
ATAACCACACCCCGGAAGCGGCCGCCATCGAAGACGCGGCGCAACTCCTC
CGAACCAGCGATATCCCCGTTGCTTTCCCCACAGAGACAGTGTATGGACT
GGGTGCAGATGCGACGCGGAGTGATGCAGTACAAGGGATCTACAAGGCGA
AGCAGAGGCCGTCAGATAACCCGTTGATTATACATGTTGATTCGCTGGGG
ATGTTGGAGCGGTTACTCAACCCCACACAGGAAAGCCCATCGCGCAGGAC
TTCCACTGCAAAGAACGCTATCCCCCCCATCTACGACTCGGTCATTTCCC
GTTTCTGGCCTGGTCCTCTCACAATCCTCCTCCCTAACCCCTCCGGCTCC
CCTCTTGCTCCCGAAGTCACCTCCAAACTTACGACATTTGGCGTGCGCAT
GCCCTCGTCCCCGCTTGCACGCTTGTTGATTCATGTAACGGACCGACCAC
TGGCGGCTCCCTCAGCCAACGCATCCACGAAGCCCTCCCCGACGGCGGCG
GAACATGTATTCCATGACCTTGAAGGTCGCATTGAGCTGATCCTTGATGG
TGGTCCCTGTGGCGTAGGCGTGGAGAGTACGGTTGTCGACGGGCTGTCCG
ACCCCCCGGCTATTCTTCGACCGGGCGGGATTGGAATCGAGGAGCTGCGG
ACGTGCGCTGGGTGGGAGAATGTACAGGTCGGATACCATGACGGCACACT
AGACGTGAAGGAGATCCCACGGGCACCGGGCATGAAGTACCGACACTACT
CGCCCAAGGCACGCGTGGTGCTGTTCGAAGCCGGCTCCGATGAGGAAGCC
GTCACGAGACATATCCGCAAGGACCTGGAAGATTCGGCCATCGGAGCACA
CATGATCGGAGTTGTCCGCACGCAACACTGGAAGCGCGGGTTGGGATTGC
TGTCTGCCAACGAGATGCAAAAGAGCCTGAAGCGCATCCCATCGCTCGTG
GACGAGCTAGTGGGATTCTCCGTCCCTGTAAGCGGCCAAGTCAACGGAAG
CACTGCAACCAAGGAGACCTTCGACTGCCACCTCGGCACGGATGTCAAGT
CGATCGCGCAGGGCCTCTTCTCTGCGCTACGGGCCATGGATGAAATGGAG
GTGGATGTCATTTACGTCGAGGGCGTGCCTGATCACCAGGGCGATCTGGC
AGCTGCTGTCATGAACCGGCTGCGCAAAGCCGCTGGGGCGGAACTCCGGG
TATAA back to topCoding sequence (CDS) from alignment at An12:1195632..1196936- >CBS51388_007793-T1 ID=CBS51388_007793-T1|Name=CBS51388_007793-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1305bp|location=Sequence derived from alignment at An12:1195632..1196936- (Aspergillus niger CBS 513.88)
ATGACTCCCAAAGCTTCCACCCGGATCGCATCGGTGCGCCGTCTCAACAA
AGAAGGCCCCGGAGAGCGATCCCTCGCAGAGTGGTGGGCCAACGAACGCG
ATAACCACACCCCGGAAGCGGCCGCCATCGAAGACGCGGCGCAACTCCTC
CGAACCAGCGATATCCCCGTTGCTTTCCCCACAGAGACAGTGTATGGACT
GGGTGCAGATGCGACGCGGAGTGATGCAGTACAAGGGATCTACAAGGCGA
AGCAGAGGCCGTCAGATAACCCGTTGATTATACATGTTGATTCGCTGGGG
ATGTTGGAGCGGTTACTCAACCCCACACAGGAAAGCCCATCGCGCAGGAC
TTCCACTGCAAAGAACGCTATCCCCCCCATCTACGACTCGGTCATTTCCC
GTTTCTGGCCTGGTCCTCTCACAATCCTCCTCCCTAACCCCTCCGGCTCC
CCTCTTGCTCCCGAAGTCACCTCCAAACTTACGACATTTGGCGTGCGCAT
GCCCTCGTCCCCGCTTGCACGCTTGTTGATTCATGTAACGGACCGACCAC
TGGCGGCTCCCTCAGCCAACGCATCCACGAAGCCCTCCCCGACGGCGGCG
GAACATGTATTCCATGACCTTGAAGGTCGCATTGAGCTGATCCTTGATGG
TGGTCCCTGTGGCGTAGGCGTGGAGAGTACGGTTGTCGACGGGCTGTCCG
ACCCCCCGGCTATTCTTCGACCGGGCGGGATTGGAATCGAGGAGCTGCGG
ACGTGCGCTGGGTGGGAGAATGTACAGGTCGGATACCATGACGGCACACT
AGACGTGAAGGAGATCCCACGGGCACCGGGCATGAAGTACCGACACTACT
CGCCCAAGGCACGCGTGGTGCTGTTCGAAGCCGGCTCCGATGAGGAAGCC
GTCACGAGACATATCCGCAAGGACCTGGAAGATTCGGCCATCGGAGCACA
CATGATCGGAGTTGTCCGCACGCAACACTGGAAGCGCGGGTTGGGATTGC
TGTCTGCCAACGAGATGCAAAAGAGCCTGAAGCGCATCCCATCGCTCGTG
GACGAGCTAGTGGGATTCTCCGTCCCTGTAAGCGGCCAAGTCAACGGAAG
CACTGCAACCAAGGAGACCTTCGACTGCCACCTCGGCACGGATGTCAAGT
CGATCGCGCAGGGCCTCTTCTCTGCGCTACGGGCCATGGATGAAATGGAG
GTGGATGTCATTTACGTCGAGGGCGTGCCTGATCACCAGGGCGATCTGGC
AGCTGCTGTCATGAACCGGCTGCGCAAAGCCGCTGGGGCGGAACTCCGGG
TATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003725 | double-stranded RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262FW1 |
| DBxref | InterPro:IPR017945 |
| DBxref | InterPro:IPR010923 |
| DBxref | InterPro:IPR038385 |
| DBxref | InterPro:IPR006070 |
| DBxref | InterPro:IPR005145 |
| DBxref | PFAM:PF01300 |
| DBxref | PFAM:PF03481 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1195632..1196936 - |
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