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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1222337..1224793- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007801-T1 ID=CBS51388_007801-T1|Name=CBS51388_007801-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2457bp|location=Sequence derived from alignment at An12:1222337..1224793- (Aspergillus niger CBS 513.88)
ATGCCGGAGAGGGTCCGTACCGTTTTTAATGACGAGGGCGACGCCGTCCC
CGCCCCTAGCAAACCGTCGTCGCAAAAAGCCGAACAAGGCGACTCCGCAC
CCGTCACGAAGCGAAAGGTCCACAGCAAGGAAGACGACCACAAGCGGAAG
AACAAGAAGCGGAAGCATGAGAATGGATTTATCGTGAAGGGGGACAAGCC
CGAGAATCTCAACATGGAGGCACCCCCTCAGCCTGAGCAGAACGGAACCG
GCCCCGGGTCGGACGACAAGCCAGCGATCAAGAAGCAGAAACAAGAAGAA
TCACAACCGCAGAAGCCAATGAAGGATGGAAAACGAAAAGATAAGCATCA
GAAATCCAAAAACACCAATTTCACGCCGCTACGAGAAAAGGCGCAAGCGT
TATACCAACAACGCAAGAACCTCCCTATCTTCCCTCATGGCGATGAGATC
CGCGGCCACTTGCGCAAGAACGATGTGATGCTGTTGGTTGGTGAGACGGG
TAGCGGAAAGAGTACACAGATTCCTCAGTTTCTGGTTACTGAGAAATGGT
GTCGGACAGCTAAGACGGTTGTGCGGGACAGTGATGGTGCGGAGAAGGAG
ATTCCTGTTGGAGGGTGTATTGCCATCACGCAGCCTAGACGAGTGGCGGC
GATTTCGTTGGCGAGACGTGTGGCAGAGGAAATGGGGACTCCGTTGGGAA
ATTCATCGCCTGCGAGTAAGGTTGGGTATTCGGTTCGGTTTGACACGTCG
ACGTCGCCGAGTACGCAGGTCAAATTTTTGACGGAGGGAATGCTGTTGCA
GGAGATGCTGCATGATCCGTGGTTGACGAAGTATAGTGCTATTGTGGTGG
ATGAAGTGCACGAGCGTGGTGTCAATGTTGATCAGGTGCTTGGTTTTCTG
AGGAACTTGGTGTCGGGAAAGAGGGAAGGACGGGGTGGTGTGCCTTTGAA
GGTCGTGGTGATGAGTGCTACGGCGGATATGGAGAGTCTGATGGGCTTCT
TCAAGGAAGGGTTCCAGGGTAGTCCCCGTGCGATTGAAGCAGCGAAGAAG
GAGACAAATGGAGATTCGGCAGACCAGAAGAGTGAGGATGATATTGCTGT
GTGCCATATCAAGGGACGTCAGTTCCCCGTCAAAACGATCTACTCTCCCG
AACCAGTGCATGACTTTGTTGATGCAGCTCTCAAGGTCATCTTCCAGATC
CATTACAAGGAGCCGTGCCCTGGTGACATCCTGGTCTTCCTGACTGGTCA
AGAGACCGTGGAGGCCTTGGAGAACCTCGTCAACGAGTACGCAACCGGGA
TGGATCCGGCGCTGCCCAAGATCCAAGTACTCCCACTCTTCGCAGCGCTC
CCTCAAGCAGCTCAACAGCGAGTGTTCGTCCCTGCTCCCCCACGGACCCG
CAAGATCATCCTCGCTACAAACATCGCAGAAACCTCCGTGACAGTCTCAG
GAGTGCGATTTGTGGTGGACTGCGGAAAGGCCAAGGTCAAGCAATTCCGC
TCCCGTCTCGGACTAGACTCGTTGCTAGTCAAGCCCATCTCCAAGTCAGC
TGCAATCCAGCGTAAGGGTCGTGCCGGTCGAGAAGCCCCAGGTCAATGCT
ACCGACTCTACACAGAGAAAGATTACCTAGCTCTGGACGAGGTCAACACG
CCTGAGATCCTACGCTGCGACATCAGTCAAGCCCTGCTCAACATGAAAGC
CCGTGGTGTTGACGACATTATGAACTTTCCTTTCCTGACACGGCCCCCGC
GCGAGGCACTCGAGAAGGCACTGCTCCAGCTTTTGAGCATTGAAGCCCTA
GAGGAAACCGGCAAGATCAGCCAAATCGGATTGCAGATCGCCAAGCTACC
TCTTACCCCGACACTGGGTCGTGTGCTCCTCGCAGCCTCAGAATACGGCC
CAGAATGCTTGTTAGACGTGATCGACATCATCTCCTGTCTCAGTGTCGAG
AACATCTTCCTGAACATCACATCAGAGGAAAAGAAAGAAGAAGCCGAAGT
AGCGCGCCGGGATCTCTACAGACGAGAGGGCGACCACCTCACCATGCTCG
CTACAGTACAGGCCTACGCAGCAGAGAATACCGATAGAAAGGCATGGGCT
GAGCGGCATCTGGTCTCCCACCGGGCCATGCAATCCGTAATGGTAAGACT
ACCCTCCATCCACTCTTTCTGGCAACCCACAACTAACAAGAAATTCATAC
AGGACGTCCGCAAACAGCTCACAACCCAATGCCGCCAAGCCAAGCTTCTC
CCCAACGACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTAACTATGTGAGTTCGTTGGCTGGAGGTATGTGTTTTG
GGAACTGACATGATGGTGAATATTGTAAAGACCATTACGGATCGTGATTG
GTCTTGA back to topCoding sequence (CDS) from alignment at An12:1222337..1224793- >CBS51388_007801-T1 ID=CBS51388_007801-T1|Name=CBS51388_007801-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4338bp|location=Sequence derived from alignment at An12:1222337..1224793- (Aspergillus niger CBS 513.88)
ACCATTACGGATCGTGATTGGTCTTGAATGCCGGAGAGGGTCCGTACCGT
TTTTAATGACGAGGGCGACGCCGTCCCCGCCCCTAGCAAACCGTCGTCGC
AAAAAGCCGAACAAGGCGACTCCGCACCCGTCACGAAGCGAAAGGTCCAC
AGCAAGGAAGACGACCACAAGCGGAAGAACAAGAAGCGGAAGCATGAGAA
TGGATTTATCGTGAAGGGGGACAAGCCCGAGAATCTCAACATGGAGGCAC
CCCCTCAGCCTGAGCAGAACGGAACCGGCCCCGGGTCGGACGACAAGCCA
GCGATCAAGAAGCAGAAACAAGAAGAATCACAACCGCAGAAGCCAATGAA
GGATGGAAAACGAAAAGATAAGCATCAGAAATCCAAAAACACCAATTTCA
CGCCGCTACGAGAAAAGGCGCAAGCGTTATACCAACAACGCAAGAACCTC
CCTATCTTCCCTCATGGCGATGAGATCCGCGGCCACTTGCGCAAGAACGA
TGTGATGCTGTTGGTTGGTGAGACGGGTAGCGGAAAGAGTACACAGATTC
CTCAGTTTCTGGTTACTGAGAAATGGTGTCGGACAGCTAAGACGGTTGTG
CGGGACAGTGATGGTGCGGAGAAGGAGATTCCTGTTGGAGGGTGTATTGC
CATCACGCAGCCTAGACGAGTGGCGGCGATTTCGTTGGCGAGACGTGTGG
CAGAGGAAATGGGGACTCCGTTGGGAAATTCATCGCCTGCGAGTAAGGTT
GGGTATTCGGTTCGGTTTGACACGTCGACGTCGCCGAGTACGCAGGTCAA
ATTTTTGACGGAGGGAATGCTGTTGCAGGAGATGCTGCATGATCCGTGGT
TGACGAAGTATAGTGCTATTGTGGTGGATGAAGTGCACGAGCGTGGTGTC
AATGTTGATCAGGTGCTTGGTTTTCTGAGGAACTTGGTGTCGGGAAAGAG
GGAAGGACGGGGTGGTGTGCCTTTGAAGGTCGTGGTGATGAGTGCTACGG
CGGATATGGAGAGTCTGATGGGCTTCTTCAAGGAAGGGTTCCAGGGTAGT
CCCCGTGCGATTGAAGCAGCGAAGAAGGAGACAAATGGAGATTCGGCAGA
CCAGAAGAGTGAGGATGATATTGCTGTGTGCCATATCAAGGGACGTCAGT
TCCCCGTCAAAACGATCTACTCTCCCGAACCAGTGCATGACTTTGTTGAT
GCAGCTCTCAAGGTCATCTTCCAGATCCATTACAAGGAGCCGTGCCCTGG
TGACATCCTGGTCTTCCTGACTGGTCAAGAGACCGTGGAGGCCTTGGAGA
ACCTCGTCAACGAGTACGCAACCGGGATGGATCCGGCGCTGCCCAAGATC
CAAGTACTCCCACTCTTCGCAGCGCTCCCTCAAGCAGCTCAACAGCGAGT
GTTCGTCCCTGCTCCCCCACGGACCCGCAAGATCATCCTCGCTACAAACA
TCGCAGAAACCTCCGTGACAGTCTCAGGAGTGCGATTTGTGGTGGACTGC
GGAAAGGCCAAGGTCAAGCAATTCCGCTCCCGTCTCGGACTAGACTCGTT
GCTAGTCAAGCCCATCTCCAAGTCAGCTGCAATCCAGCGTAAGGGTCGTG
CCGGTCGAGAAGCCCCAGGTCAATGCTACCGACTCTACACAGAGAAAGAT
TACCTAGCTCTGGACGAGGTCAACACGCCTGAGATCCTACGCTGCGACAT
CAGTCAAGCCCTGCTCAACATGAAAGCCCGTGGTGTTGACGACATTATGA
ACTTTCCTTTCCTGACACGGCCCCCGCGCGAGGCACTCGAGAAGGCACTG
CTCCAGCTTTTGAGCATTGAAGCCCTAGAGGAAACCGGCAAGATCAGCCA
AATCGGATTGCAGATCGCCAAGCTACCTCTTACCCCGACACTGGGTCGTG
TGCTCCTCGCAGCCTCAGAATACGGCCCAGAATGCTTGTTAGACGTGATC
GACATCATCTCCTGTCTCAGTGTCGAGAACATCTTCCTGAACATCACATC
AGAGGAAAAGAAAGAAGAAGCCGAAGTAGCGCGCCGGGATCTCTACAGAC
GAGAGGGCGACCACCTCACCATGCTCGCTACAGTACAGGCCTACGCAGCA
GAGAATACCGATAGAAAGGCATGGGCTGAGCGGCATCTGGTCTCCCACCG
GGCCATGCAATCCGTAATGACCATTACGGATCGTGATTGGTCTTGAATGC
CGGAGAGGGTCCGTACCGTTTTTAATGACGAGGGCGACGCCGTCCCCGCC
CCTAGCAAACCGTCGTCGCAAAAAGCCGAACAAGGCGACTCCGCACCCGT
CACGAAGCGAAAGGTCCACAGCAAGGAAGACGACCACAAGCGGAAGAACA
AGAAGCGGAAGCATGAGAATGGATTTATCGTGAAGGGGGACAAGCCCGAG
AATCTCAACATGGAGGCACCCCCTCAGCCTGAGCAGAACGGAACCGGCCC
CGGGTCGGACGACAAGCCAGCGATCAAGAAGCAGAAACAAGAAGAATCAC
AACCGCAGAAGCCAATGAAGGATGGAAAACGAAAAGATAAGCATCAGAAA
TCCAAAAACACCAATTTCACGCCGCTACGAGAAAAGGCGCAAGCGTTATA
CCAACAACGCAAGAACCTCCCTATCTTCCCTCATGGCGATGAGATCCGCG
GCCACTTGCGCAAGAACGATGTGATGCTGTTGGTTGGTGAGACGGGTAGC
GGAAAGAGTACACAGATTCCTCAGTTTCTGGTTACTGAGAAATGGTGTCG
GACAGCTAAGACGGTTGTGCGGGACAGTGATGGTGCGGAGAAGGAGATTC
CTGTTGGAGGGTGTATTGCCATCACGCAGCCTAGACGAGTGGCGGCGATT
TCGTTGGCGAGACGTGTGGCAGAGGAAATGGGGACTCCGTTGGGAAATTC
ATCGCCTGCGAGTAAGGTTGGGTATTCGGTTCGGTTTGACACGTCGACGT
CGCCGAGTACGCAGGTCAAATTTTTGACGGAGGGAATGCTGTTGCAGGAG
ATGCTGCATGATCCGTGGTTGACGAAGTATAGTGCTATTGTGGTGGATGA
AGTGCACGAGCGTGGTGTCAATGTTGATCAGGTGCTTGGTTTTCTGAGGA
ACTTGGTGTCGGGAAAGAGGGAAGGACGGGGTGGTGTGCCTTTGAAGGTC
GTGGTGATGAGTGCTACGGCGGATATGGAGAGTCTGATGGGCTTCTTCAA
GGAAGGGTTCCAGGGTAGTCCCCGTGCGATTGAAGCAGCGAAGAAGGAGA
CAAATGGAGATTCGGCAGACCAGAAGAGTGAGGATGATATTGCTGTGTGC
CATATCAAGGGACGTCAGTTCCCCGTCAAAACGATCTACTCTCCCGAACC
AGTGCATGACTTTGTTGATGCAGCTCTCAAGGTCATCTTCCAGATCCATT
ACAAGGAGCCGTGCCCTGGTGACATCCTGGTCTTCCTGACTGGTCAAGAG
ACCGTGGAGGCCTTGGAGAACCTCGTCAACGAGTACGCAACCGGGATGGA
TCCGGCGCTGCCCAAGATCCAAGTACTCCCACTCTTCGCAGCGCTCCCTC
AAGCAGCTCAACAGCGAGTGTTCGTCCCTGCTCCCCCACGGACCCGCAAG
ATCATCCTCGCTACAAACATCGCAGAAACCTCCGTGACAGTCTCAGGAGT
GCGATTTGTGGTGGACTGCGGAAAGGCCAAGGTCAAGCAATTCCGCTCCC
GTCTCGGACTAGACTCGTTGCTAGTCAAGCCCATCTCCAAGTCAGCTGCA
ATCCAGCGTAAGGGTCGTGCCGGTCGAGAAGCCCCAGGTCAATGCTACCG
ACTCTACACAGAGAAAGATTACCTAGCTCTGGACGAGGTCAACACGCCTG
AGATCCTACGCTGCGACATCAGTCAAGCCCTGCTCAACATGAAAGCCCGT
GGTGTTGACGACATTATGAACTTTCCTTTCCTGACACGGCCCCCGCGCGA
GGCACTCGAGAAGGCACTGCTCCAGCTTTTGAGCATTGAAGCCCTAGAGG
AAACCGGCAAGATCAGCCAAATCGGATTGCAGATCGCCAAGCTACCTCTT
ACCCCGACACTGGGTCGTGTGCTCCTCGCAGCCTCAGAATACGGCCCAGA
ATGCTTGTTAGACGTGATCGACATCATCTCCTGTCTCAGTGTCGAGAACA
TCTTCCTGAACATCACATCAGAGGAAAAGAAAGAAGAAGCCGAAGTAGCG
CGCCGGGATCTCTACAGACGAGAGGGCGACCACCTCACCATGCTCGCTAC
AGTACAGGCCTACGCAGCAGAGAATACCGATAGAAAGGCATGGGCTGAGC
GGCATCTGGTCTCCCACCGGGCCATGCAATCCGTAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004386 | helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR002464 |
| DBxref | InterPro:IPR007502 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF04408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1222337..1224793 - |
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