You are here

Home

CBS51388_007802-T1, CBS51388_007802-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007802-T1
Unique NameCBS51388_007802-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1225145..1226847-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007802-T1 ID=CBS51388_007802-T1|Name=CBS51388_007802-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1703bp|location=Sequence derived from alignment at An12:1225145..1226847- (Aspergillus niger CBS 513.88)
ATGGAGGACAACGCGGAACTCGAGTCGTTTCGGCGCCAGTGGCGTGAAGA
AGTTGCGCGCCGGGTGAAGCCATCGAGACTTCAACCAGCGCAGCCCAGGC
CAACCAAGCCCACCGCAACCTCGTCGAGCCATATCCCGCCTACCCACCAC
GAAGTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAGTGGCATCGGTCGA
TCATAGTGAGATTGTTCATGGAGTCGGTCATTTGAGCTTAGGGGTAGCGG
ATGAGGATGTGTTTCACTCGCGAGTACCTCGAAGTGAGCCCAAGTCTGCA
TTGGAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCGAGGGGAATCTCGG
AGACAGTCTGCAACATTATCGCAAAGCTTACCGCGTAAGTAAATATCTTC
GCTATATCAAGGGAGCTCTCTCTGACAATGCTGGGTACAGTTAGATGCAG
CGGTCGACAAGACGTACAGAAACAAGCATTTCGCCTGGGCATGGAAGAAG
GGTGCGCAGCCACCTGCTGCCAATGCTGCGGCCAGCAATGCCACGGCAAC
ACAACCAGCTGCAGATGAACCCGAAATTATACCCACCCCGGAACTCATCG
CTTCATTCGCTCATCTTCCTATCCCGCAGGCCGAGCCCCTGATCGAAAAT
ACTCCTCCGCCCCCTTGTCCCATCTCGAAGGTCCCGTCCGAGGTGCTGGT
CGAAATCTTGAGGCATGTGGCTGTGATAGATCCGGCCTCGTTTTGTCGGA
TGGCGCTCGTTTGTAAGAGATTGGCATATCACTTTGCACATGAGCAGCAC
ATCTGGAAACGCCTTTGCCAGGGCTCCGAGTTCGGATTCAAGGCCATGCA
CTATTCATTTGCTTGTGATGTCCATGGCATACCGGAGTACACCTTAGGGC
CACGCTACACGCCTTTTCCTCGATCAATGCCCGTTCAAATCCCGGAACCA
TTATCGTCCTGGGCGGAAGTATTCCAGATATTCCCTCGGATTCGGTTTAC
GGGCATCTACATAAGCACTGTGAACTACACCCGTCCAGGTGCAGCCTCGG
TGTACCAGAACACCTCGTGGAACAGCCCCATCCACATTGTGACCTACTAC
CGCTATCTCCGCTTCTACCCAGACGGGACAGTCATTTACCTACTTACCAC
AGTCGAGCCATTGGAGGTTGTGCCCTACATCAGCAAGGAGAACGTCAAGG
CTGCACGGGCAATTTCCCAGAAGCAATTCCATCGTCAAATGGCAGACCCA
GGCAATACCATTACGGGTCCTACCGATACCATTCCTCCCATTGCTATGGG
TGCGCTGAGGCAAGCTTACCGAGGTCGCTGGCGCTTGGCCAAACCGGCTC
CCGCCTCTGATTCAGCCGACGACGTTCCCCAAGACGATCTTATCTCCGGA
TACGAATCTTTGCCCGTCAAGGCTCAATCGGCAGGCGCGCCACCTGACCC
TCGCGACCTGGTCATTGAAACCGAGGGAGTTGGACCGAAATACATGTACC
TCTTGCACCTCTCGCTTCGGTCGGTGTCAGCTCCCAAACCTACCAACGCT
AACATGACGCCACCCAACCCGTCCAAGAACACCAAGCTGGCCTGGAAGGG
CTATTGGAGTTACAACAGGCTCACTGACGACTGGGCTGAATTTGGACTCA
AGAACGACCGGGCGTTTGTTTTCCGACGAGTGCGCGGCTGGGGCATGAAT
TGA
back to top

Coding sequence (CDS) from alignment at An12:1225145..1226847-

>CBS51388_007802-T1 ID=CBS51388_007802-T1|Name=CBS51388_007802-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3294bp|location=Sequence derived from alignment at An12:1225145..1226847- (Aspergillus niger CBS 513.88)
TTAGATGCAGCGGTCGACAAGACGTACAGAAACAAGCATTTCGCCTGGGC
ATGGAAGAAGGGTGCGCAGCCACCTGCTGCCAATGCTGCGGCCAGCAATG
CCACGGCAACACAACCAGCTGCAGATGAACCCGAAATTATACCCACCCCG
GAACTCATCGCTTCATTCGCTCATCTTCCTATCCCGCAGGCCGAGCCCCT
GATCGAAAATACTCCTCCGCCCCCTTGTCCCATCTCGAAGGTCCCGTCCG
AGGTGCTGGTCGAAATCTTGAGGCATGTGGCTGTGATAGATCCGGCCTCG
TTTTGTCGGATGGCGCTCGTTTGTAAGAGATTGGCATATCACTTTGCACA
TGAGCAGCACATCTGGAAACGCCTTTGCCAGGGCTCCGAGTTCGGATTCA
AGGCCATGCACTATTCATTTGCTTGTGATGTCCATGGCATACCGGAGTAC
ACCTTAGGGCCACGCTACACGCCTTTTCCTCGATCAATGCCCGTTCAAAT
CCCGGAACCATTATCGTCCTGGGCGGAAGTATTCCAGATATTCCCTCGGA
TTCGGTTTACGGGCATCTACATAAGCACTGTGAACTACACCCGTCCAGGT
GCAGCCTCGGTGTACCAGAACACCTCGTGGAACAGCCCCATCCACATTGT
GACCTACTACCGCTATCTCCGCTTCTACCCAGACGGGACAGTCATTTACC
TACTTACCACAGTCGAGCCATTGGAGGTTGTGCCCTACATCAGCAAGGAG
AACGTCAAGGCTGCACGGGCAATTTCCCAGAAGCAATTCCATCGTCAAAT
GGCAGACCCAGGCAATACCATTACGGGTCCTACCGATACCATTCCTCCCA
TTGCTATGGGTGCGCTGAGGCAAGCTTACCGAGGTCGCTGGCGCTTGGCC
AAACCGGCTCCCGCCTCTGATTCAGCCGACGACGTTCCCCAAGACGATCT
TATCTCCGGATACGAATCTTTGCCCGTCAAGGCTCAATCGGCAGGCGCGC
CACCTGACCCTCGCGACCTGGTCATTGAAACCGAGGGAGTTGGACCGAAA
TACATGTACCTCTTGCACCTCTCGCTTCGGTCGGTGTCAGCTCCCAAACC
TACCAACGCTAACATGACGCCACCCAACCCGTCCAAGAACACCAAGCTGG
CCTGGAAGGGCTATTGGAGTTACAACAGGCTCACTGACGACTGGGCTGAA
TTTGGACTCAAGAACGACCGGGCGTTTGTTTTCCGACGAGTGCGCGGCTG
GGGCATGAATTGAATGGAGGACAACGCGGAACTCGAGTCGTTTCGGCGCC
AGTGGCGTGAAGAAGTTGCGCGCCGGGTGAAGCCATCGAGACTTCAACCA
GCGCAGCCCAGGCCAACCAAGCCCACCGCAACCTCGTCGAGCCATATCCC
GCCTACCCACCACGAAGTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAG
TGGCATCGGTCGATCATAGTGAGATTGTTCATGGAGTCGGTCATTTGAGC
TTAGGGGTAGCGGATGAGGATGTGTTTCACTCGCGAGTACCTCGAAGTGA
GCCCAAGTCTGCATTGGAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCG
AGGGGAATCTCGGAGACAGTCTGCAACATTATCGCAAAGCTTACCGCTTA
GATGCAGCGGTCGACAAGACGTACAGAAACAAGCATTTCGCCTGGGCATG
GAAGAAGGGTGCGCAGCCACCTGCTGCCAATGCTGCGGCCAGCAATGCCA
CGGCAACACAACCAGCTGCAGATGAACCCGAAATTATACCCACCCCGGAA
CTCATCGCTTCATTCGCTCATCTTCCTATCCCGCAGGCCGAGCCCCTGAT
CGAAAATACTCCTCCGCCCCCTTGTCCCATCTCGAAGGTCCCGTCCGAGG
TGCTGGTCGAAATCTTGAGGCATGTGGCTGTGATAGATCCGGCCTCGTTT
TGTCGGATGGCGCTCGTTTGTAAGAGATTGGCATATCACTTTGCACATGA
GCAGCACATCTGGAAACGCCTTTGCCAGGGCTCCGAGTTCGGATTCAAGG
CCATGCACTATTCATTTGCTTGTGATGTCCATGGCATACCGGAGTACACC
TTAGGGCCACGCTACACGCCTTTTCCTCGATCAATGCCCGTTCAAATCCC
GGAACCATTATCGTCCTGGGCGGAAGTATTCCAGATATTCCCTCGGATTC
GGTTTACGGGCATCTACATAAGCACTGTGAACTACACCCGTCCAGGTGCA
GCCTCGGTGTACCAGAACACCTCGTGGAACAGCCCCATCCACATTGTGAC
CTACTACCGCTATCTCCGCTTCTACCCAGACGGGACAGTCATTTACCTAC
TTACCACAGTCGAGCCATTGGAGGTTGTGCCCTACATCAGCAAGGAGAAC
GTCAAGGCTGCACGGGCAATTTCCCAGAAGCAATTCCATCGTCAAATGGC
AGACCCAGGCAATACCATTACGGGTCCTACCGATACCATTCCTCCCATTG
CTATGGGTGCGCTGAGGCAAGCTTACCGAGGTCGCTGGCGCTTGGCCAAA
CCGGCTCCCGCCTCTGATTCAGCCGACGACGTTCCCCAAGACGATCTTAT
CTCCGGATACGAATCTTTGCCCGTCAAGGCTCAATCGGCAGGCGCGCCAC
CTGACCCTCGCGACCTGGTCATTGAAACCGAGGGAGTTGGACCGAAATAC
ATGTACCTCTTGCACCTCTCGCTTCGGTCGGTGTCAGCTCCCAAACCTAC
CAACGCTAACATGACGCCACCCAACCCGTCCAAGAACACCAAGCTGGCCT
GGAAGGGCTATTGGAGTTACAACAGGCTCACTGACGACTGGGCTGAATTT
GGACTCAAGAACGACCGGGCGTTTGTTTTCCGACGAGTGCGCGGCTGGGG
CATGAATTGAATGGAGGACAACGCGGAACTCGAGTCGTTTCGGCGCCAGT
GGCGTGAAGAAGTTGCGCGCCGGGTGAAGCCATCGAGACTTCAACCAGCG
CAGCCCAGGCCAACCAAGCCCACCGCAACCTCGTCGAGCCATATCCCGCC
TACCCACCACGAAGTATCGGAGCGCAGGGAAGAGGAAGACGGAGGAGTGG
CATCGGTCGATCATAGTGAGATTGTTCATGGAGTCGGTCATTTGAGCTTA
GGGGTAGCGGATGAGGATGTGTTTCACTCGCGAGTACCTCGAAGTGAGCC
CAAGTCTGCATTGGAGCACTTTGAAAGAGCGGTCGAGAAGGAAGCCGAGG
GGAATCTCGGAGACAGTCTGCAACATTATCGCAAAGCTTACCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007802CBS51388_007802Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007802-T1CBS51388_007802-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007802-T1.cdsCBS51388_007802-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007802-T1.exon2CBS51388_007802-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007802-T1.exon1CBS51388_007802-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09261FAB
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1225145..1226847 -
Powered by Drupal