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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1239492..1241860+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007807-T1 ID=CBS51388_007807-T1|Name=CBS51388_007807-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2369bp|location=Sequence derived from alignment at An12:1239492..1241860+ (Aspergillus niger CBS 513.88)
ATGCCTACGTATCCTATCCGTCGCCGGCCGCGCGAGTGTAAAACTTGCCT
GCCCTGCCGTGCCAGCAAGGTCCGCTGCGATCGCAATGTTCCATGCGGCA
ATTGCGTCAAGCGCAACTTCACCTGCTCCTACGGTCGTCCTCCACCCACC
GCTCCCAGACCGGCCTCCTTCATCGCCGACCAGTATGGCTCGTCCGCTAC
GACTCCCGCCACTAATACGCCTCAATACATGCCTTCCGCGGCTTATCAGC
CGGCCGCCCATCGCGACCCTCCCTACGGTGCCGGTCCAGAGTCGGCAAGC
TCTGCCAACCAGGATGGTCTATCGGAGATGGTGACGCTGTCGCAAGAGGA
ATGGGACGAGATCAACTCCAAGATGCAGACCATGGAACAGATTCTGACCA
GTTTGGGCTCCCTGTTCCAGGCGCACGGCGCGCGGAAGGCCGTCCACTCC
CGATCGGAACTTTCGCAGGAGCAGGAGGAGGAAGACCACTCGCCTGCCTC
CGAGGGCATCTATGGGTCAACTACGCTGAGAACAAATTCGGTTCACATCG
GATCGAGATCTGCTCTGGTGGACATTCTGGACAAATCGAAGGTTTCGGAG
GACACCGCGCAGGCGCTACCCAAAGATGACCTTCTTACCGAGCTGGCGAT
GGGGAACGAGTCGGCCGCCTACCCCTTCGTTGATCTTTGGTCGTCCGATC
CATATACGTTCAATATTTCTGGCGTGTGCAGTGTGCTGCCAGACGATGAG
CAGTGTCGAAAATTTCTAGCTTTTTATCGAAATATTGGTGCGGTGCTGTA
TCCCGTATTGCCCGATCTCGACAAGTTTGAACGGGACATGGACAAGCTGT
TGCAGGGCCGACAGGCCGCGGGTGGCGTATATAATCCAGATGCTAATGGC
CTAGTGAAGCCGTTTGGCATGAGTGTCTCTTTTCTCAGCCTTCTATTCGC
CATTTTAGCGTCTGGCTCTCAACTATCTGATCTGCCGGGGAAAGAACGAG
AGTTGACCTCGTGGGTATACGGTTGGTCGACACCTCCCCCATACTAGCCC
CTATTCACTCCAGACTTACCAGCCTTAGTGTCCTGTTCTTACCATTGTTT
GCGCATGTTGAACTATGTGTCTCAGCCATCCCTGGAGGTGATCCAGATCC
TCTTGATCATCGGCAGTGTCTTGTCGTACAATATGAATGCAGGCGCATCT
TACACATTGCTGGGTGAGTACCATTCGGACGCACCAAGGCAGCAGCTCAA
AGCTAACTGTTCGACTGAAAGGAATGACGGAGCGTATGTGTATGGTGCTG
GGCCTTCATGTCGAGACCTCGGGGTTTCCACGAGCCACGCAAGCGGCGCG
GAGAAGAGTATGGTAAGGGGCATTCCCGAGATTTCTGAAGGTGACGGCGG
TATTTTCGGAGACTAATGCGCAATGCAACCAGGTGGGCGATGGCCTTTCA
GAACAGTCATTTTTCCTTGGCGTATGACCGACCGTCCATTACCATGATCA
ATCAGCCGGAGATCCCGTACGATCCGAAATCGATGCCTGGCCACCGAGGG
TATTTCGAAACACTTTGCCGCCTGATTCAGGTGGTCCTCGATATGCTGCG
AGGGCTGATGTTCACCCATCATACCCACCTGCGGTACCACGAAATCCGGG
AGTATAAGCAACGCATTGAACGAATCATTGCCGAGGCTGCACCGCATCTG
AAATCTCGCGAACGCTGTGCCACGCTAGGGGAGCATATCGAAAGAACCGA
ACTGAGACTGCATTCCTCGTGGTTCATATCTCTCATGTGCCGAGTTTCGT
TGGATCCGGATACTCCGATGGATGAACAGCGGCGCGAAGTTGTTCGGGAG
GATTGCTTGACGAATTTGATAAACACGATCGAGGCCTTCATCGAGCTGCA
TTCCATCAATTCCCATGCTTCGCGAACCTGGATCAGCCTGCAACGAACTA
TCGCGTCAGCTTTTCTTTTGGTAGCGAATAACAATGATCAGTTGCATCCG
CAGACGTGGGACTTGATCCAGAAATTGGAAGCGGTGCTGTCAGACCATGT
TCATGGCGATGAGAGCAGCGACCACAACAGCAAGACGGACTCTGCAAAGC
ATCTTGCATCTTCCCTTCACGCTCTCCGGGAGGTCAGTGCCGCCTTCCGT
GCGCGCAAACTGCGTCACCGGGTGGTGCCGAAGGTGGTACCTAACATGCA
GAACACTTCCCCTGCCACCTCGTTTGCGTCGCCATCCTCCACCCTGGGAT
CGGGGATGCCGACGTACTCCTCTGACCAGAGCGTTTCGCCCGACGGGCAT
ATTGACAACATTCTTAACCAGGTTTCGGATGTAATGCTATTTCCCAGCAT
GAGTTCGGGAAATGCTTGA back to topCoding sequence (CDS) from alignment at An12:1239492..1241860+ >CBS51388_007807-T1 ID=CBS51388_007807-T1|Name=CBS51388_007807-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6147bp|location=Sequence derived from alignment at An12:1239492..1241860+ (Aspergillus niger CBS 513.88)
ATGCCTACGTATCCTATCCGTCGCCGGCCGCGCGAGTGTAAAACTTGCCT
GCCCTGCCGTGCCAGCAAGGTCCGCTGCGATCGCAATGTTCCATGCGGCA
ATTGCGTCAAGCGCAACTTCACCTGCTCCTACGGTCGTCCTCCACCCACC
GCTCCCAGACCGGCCTCCTTCATCGCCGACCAGTATGGCTCGTCCGCTAC
GACTCCCGCCACTAATACGCCTCAATACATGCCTTCCGCGGCTTATCAGC
CGGCCGCCCATCGCGACCCTCCCTACGGTGCCGGTCCAGAGTCGGCAAGC
TCTGCCAACCAGGATGGTCTATCGGAGATGGTGACGCTGTCGCAAGAGGA
ATGGGACGAGATCAACTCCAAGATGCAGACCATGGAACAGATTCTGACCA
GTTTGGGCTCCCTGTTCCAGGCGCACGGCGCGCGGAAGGCCGTCCACTCC
CGATCGGAACTTTCGCAGGAGCAGGAGGAGGAAGACCACTCGCCTGCCTC
CGAGGGCATCTATGGGTCAACTACGCTGAGAACAAATTCGGTTCACATCG
GATCGAGATCTGCTCTGGTGGACATTCTGGACAAATCGAAGGTTTCGGAG
GACACCGCGCAGGCGCTACCCAAAGATGACCTTCTTACCGAGCTGGCGAT
GGGGAACGAGTCGGCCGCCTACCCCTTCGTTGATCTTTGGTCGTCCGATC
CATATACGTTCAATATTTCTGGCGTGTGCAGTGTGCTGCCAGACGATGAG
CAGTGTCGAAAATTTCTAGCTTTTTATCGAAATATTGGTGCGGTGCTGTA
TCCCGTATTGCCCGATCTCGACAAGTTTGAACGGGACATGGACAAGCTGT
TGCAGGGCCGACAGGCCGCGGGTGGCGTATATAATCCAGATGCTAATGGC
CTAGTGAAGCCGTTTGGCATGAGTGTCTCTTTTCTCAGCCTTCTATTCGC
CATTTTAGCGTCTGGCTCTCAACTATCTGATCTGCCGGGGAAAGAACGAG
AGTTGACCTCGTGGGTATACGGCGCATCTTACACATTGCTGGGTGAGTAC
CATTCGGACGCACCAAGGCAGCAGCTCAAAGCTAACTGTTCGACTGAAAG
GAATGACGGAGCGTGGGCGATGGCCTTTCAGAACAGTCATTTTTCCTTGG
CGTATGACCGACCGTCCATTACCATGATCAATCAGCCGGAGATCCCGTAC
GATCCGAAATCGATGCCTGGCCACCGAGGGTATTTCGAAACACTTTGCCG
CCTGATTCAGGTGGTCCTCGATATGCTGCGAGGGCTGATGTTCACCCATC
ATACCCACCTGCGGTACCACGAAATCCGGGAGTATAAGCAACGCATTGAA
CGAATCATTGCCGAGGCTGCACCGCATCTGAAATCTCGCGAACGCTGTGC
CACGCTAGGGGAGCATATCGAAAGAACCGAACTGAGACTGCATTCCTCGT
GGTTCATATCTCTCATGTGCCGAGTTTCGTTGGATCCGGATACTCCGATG
GATGAACAGCGGCGCGAAGTTGTTCGGGAGGATTGCTTGACGAATTTGAT
AAACACGATCGAGGCCTTCATCGAGCTGCATTCCATCAATTCCCATGCTT
CGCGAACCTGGATCAGCCTGCAACGAACTATCGCGTCAGCTTTTCTTTTG
GTAGCGAATAACAATGATCAGTTGCATCCGCAGACGTGGGACTTGATCCA
GAAATTGGAAGCGGTGCTGTCAGACCATGTTCATGGCGATGAGAGCAGCG
ACCACAACAGCAAGACGGACTCTGCAAAGCATCTTGCATCTTCCCTTCAC
GCTCTCCGGGAGGTCAGTGCCGCCTTCCGTGCGCGCAAACTGCGTCACCG
GGTGGTGCCGAAGGTGGTACCTAACATGCAGAACACTTCCCCTGCCACCT
CGTTTGCGTCGCCATCCTCCACCCTGGGATCGGGGATGCCGACGTACTCC
TCTGACCAGAGCGTTTCGCCCGACGGGCATATTGACAACATTCTTAACCA
GGTTTCGGATGTAATGCTATTTCCCAGCATGAGTTCGGGAAATGCTTGAA
TGCCTACGTATCCTATCCGTCGCCGGCCGCGCGAGTGTAAAACTTGCCTG
CCCTGCCGTGCCAGCAAGGTCCGCTGCGATCGCAATGTTCCATGCGGCAA
TTGCGTCAAGCGCAACTTCACCTGCTCCTACGGTCGTCCTCCACCCACCG
CTCCCAGACCGGCCTCCTTCATCGCCGACCAGTATGGCTCGTCCGCTACG
ACTCCCGCCACTAATACGCCTCAATACATGCCTTCCGCGGCTTATCAGCC
GGCCGCCCATCGCGACCCTCCCTACGGTGCCGGTCCAGAGTCGGCAAGCT
CTGCCAACCAGGATGGTCTATCGGAGATGGTGACGCTGTCGCAAGAGGAA
TGGGACGAGATCAACTCCAAGATGCAGACCATGGAACAGATTCTGACCAG
TTTGGGCTCCCTGTTCCAGGCGCACGGCGCGCGGAAGGCCGTCCACTCCC
GATCGGAACTTTCGCAGGAGCAGGAGGAGGAAGACCACTCGCCTGCCTCC
GAGGGCATCTATGGGTCAACTACGCTGAGAACAAATTCGGTTCACATCGG
ATCGAGATCTGCTCTGGTGGACATTCTGGACAAATCGAAGGTTTCGGAGG
ACACCGCGCAGGCGCTACCCAAAGATGACCTTCTTACCGAGCTGGCGATG
GGGAACGAGTCGGCCGCCTACCCCTTCGTTGATCTTTGGTCGTCCGATCC
ATATACGTTCAATATTTCTGGCGTGTGCAGTGTGCTGCCAGACGATGAGC
AGTGTCGAAAATTTCTAGCTTTTTATCGAAATATTGGTGCGGTGCTGTAT
CCCGTATTGCCCGATCTCGACAAGTTTGAACGGGACATGGACAAGCTGTT
GCAGGGCCGACAGGCCGCGGGTGGCGTATATAATCCAGATGCTAATGGCC
TAGTGAAGCCGTTTGGCATGAGTGTCTCTTTTCTCAGCCTTCTATTCGCC
ATTTTAGCGTCTGGCTCTCAACTATCTGATCTGCCGGGGAAAGAACGAGA
GTTGACCTCGTGGGTATACGGCGCATCTTACACATTGCTGGGTGAGTACC
ATTCGGACGCACCAAGGCAGCAGCTCAAAGCTAACTGTTCGACTGAAAGG
AATGACGGAGCGTGGGCGATGGCCTTTCAGAACAGTCATTTTTCCTTGGC
GTATGACCGACCGTCCATTACCATGATCAATCAGCCGGAGATCCCGTACG
ATCCGAAATCGATGCCTGGCCACCGAGGGTATTTCGAAACACTTTGCCGC
CTGATTCAGGTGGTCCTCGATATGCTGCGAGGGCTGATGTTCACCCATCA
TACCCACCTGCGGTACCACGAAATCCGGGAGTATAAGCAACGCATTGAAC
GAATCATTGCCGAGGCTGCACCGCATCTGAAATCTCGCGAACGCTGTGCC
ACGCTAGGGGAGCATATCGAAAGAACCGAACTGAGACTGCATTCCTCGTG
GTTCATATCTCTCATGTGCCGAGTTTCGTTGGATCCGGATACTCCGATGG
ATGAACAGCGGCGCGAAGTTGTTCGGGAGGATTGCTTGACGAATTTGATA
AACACGATCGAGGCCTTCATCGAGCTGCATTCCATCAATTCCCATGCTTC
GCGAACCTGGATCAGCCTGCAACGAACTATCGCGTCAGCTTTTCTTTTGG
TAGCGAATAACAATGATCAGTTGCATCCGCAGACGTGGGACTTGATCCAG
AAATTGGAAGCGGTGCTGTCAGACCATGTTCATGGCGATGAGAGCAGCGA
CCACAACAGCAAGACGGACTCTGCAAAGCATCTTGCATCTTCCCTTCACG
CTCTCCGGGAGGTCAGTGCCGCCTTCCGTGCGCGCAAACTGCGTCACCGG
GTGGTGCCGAAGGTGGTACCTAACATGCAGAACACTTCCCCTGCCACCTC
GTTTGCGTCGCCATCCTCCACCCTGGGATCGGGGATGCCGACGTACTCCT
CTGACCAGAGCGTTTCGCCCGACGGGCATATTGACAACATTCTTAACCAG
GTTTCGGATGTAATGCTATTTCCCAGCATGAGTTCGGGAAATGCTTGAAT
GCCTACGTATCCTATCCGTCGCCGGCCGCGCGAGTGTAAAACTTGCCTGC
CCTGCCGTGCCAGCAAGGTCCGCTGCGATCGCAATGTTCCATGCGGCAAT
TGCGTCAAGCGCAACTTCACCTGCTCCTACGGTCGTCCTCCACCCACCGC
TCCCAGACCGGCCTCCTTCATCGCCGACCAGTATGGCTCGTCCGCTACGA
CTCCCGCCACTAATACGCCTCAATACATGCCTTCCGCGGCTTATCAGCCG
GCCGCCCATCGCGACCCTCCCTACGGTGCCGGTCCAGAGTCGGCAAGCTC
TGCCAACCAGGATGGTCTATCGGAGATGGTGACGCTGTCGCAAGAGGAAT
GGGACGAGATCAACTCCAAGATGCAGACCATGGAACAGATTCTGACCAGT
TTGGGCTCCCTGTTCCAGGCGCACGGCGCGCGGAAGGCCGTCCACTCCCG
ATCGGAACTTTCGCAGGAGCAGGAGGAGGAAGACCACTCGCCTGCCTCCG
AGGGCATCTATGGGTCAACTACGCTGAGAACAAATTCGGTTCACATCGGA
TCGAGATCTGCTCTGGTGGACATTCTGGACAAATCGAAGGTTTCGGAGGA
CACCGCGCAGGCGCTACCCAAAGATGACCTTCTTACCGAGCTGGCGATGG
GGAACGAGTCGGCCGCCTACCCCTTCGTTGATCTTTGGTCGTCCGATCCA
TATACGTTCAATATTTCTGGCGTGTGCAGTGTGCTGCCAGACGATGAGCA
GTGTCGAAAATTTCTAGCTTTTTATCGAAATATTGGTGCGGTGCTGTATC
CCGTATTGCCCGATCTCGACAAGTTTGAACGGGACATGGACAAGCTGTTG
CAGGGCCGACAGGCCGCGGGTGGCGTATATAATCCAGATGCTAATGGCCT
AGTGAAGCCGTTTGGCATGAGTGTCTCTTTTCTCAGCCTTCTATTCGCCA
TTTTAGCGTCTGGCTCTCAACTATCTGATCTGCCGGGGAAAGAACGAGAG
TTGACCTCGTGGGTATACGGCGCATCTTACACATTGCTGGGTGAGTACCA
TTCGGACGCACCAAGGCAGCAGCTCAAAGCTAACTGTTCGACTGAAAGGA
ATGACGGAGCGTGGGCGATGGCCTTTCAGAACAGTCATTTTTCCTTGGCG
TATGACCGACCGTCCATTACCATGATCAATCAGCCGGAGATCCCGTACGA
TCCGAAATCGATGCCTGGCCACCGAGGGTATTTCGAAACACTTTGCCGCC
TGATTCAGGTGGTCCTCGATATGCTGCGAGGGCTGATGTTCACCCATCAT
ACCCACCTGCGGTACCACGAAATCCGGGAGTATAAGCAACGCATTGAACG
AATCATTGCCGAGGCTGCACCGCATCTGAAATCTCGCGAACGCTGTGCCA
CGCTAGGGGAGCATATCGAAAGAACCGAACTGAGACTGCATTCCTCGTGG
TTCATATCTCTCATGTGCCGAGTTTCGTTGGATCCGGATACTCCGATGGA
TGAACAGCGGCGCGAAGTTGTTCGGGAGGATTGCTTGACGAATTTGATAA
ACACGATCGAGGCCTTCATCGAGCTGCATTCCATCAATTCCCATGCTTCG
CGAACCTGGATCAGCCTGCAACGAACTATCGCGTCAGCTTTTCTTTTGGT
AGCGAATAACAATGATCAGTTGCATCCGCAGACGTGGGACTTGATCCAGA
AATTGGAAGCGGTGCTGTCAGACCATGTTCATGGCGATGAGAGCAGCGAC
CACAACAGCAAGACGGACTCTGCAAAGCATCTTGCATCTTCCCTTCACGC
TCTCCGGGAGGTCAGTGCCGCCTTCCGTGCGCGCAAACTGCGTCACCGGG
TGGTGCCGAAGGTGGTACCTAACATGCAGAACACTTCCCCTGCCACCTCG
TTTGCGTCGCCATCCTCCACCCTGGGATCGGGGATGCCGACGTACTCCTC
TGACCAGAGCGTTTCGCCCGACGGGCATATTGACAACATTCTTAACCAGG
TTTCGGATGTAATGCTATTTCCCAGCATGAGTTCGGGAAATGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1239492..1241860 + |
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