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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1259854..1261817+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007812-T1 ID=CBS51388_007812-T1|Name=CBS51388_007812-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1964bp|location=Sequence derived from alignment at An12:1259854..1261817+ (Aspergillus niger CBS 513.88)
ATGCCGGAAGATCGCCCCGAAAGCCAACGGTATTCGGTTCCACGGGTCAG
AATCCATGGAGAAAGCGATCAGCCAGTGCCGGAGTTTCATGAGGATGGTT
TTGAAATGACGCTTCCCACTGATGAATTCGCCCAAATATCCCTCTCTGAG
CAGCAGCAGACTCATGGAAAGACCATCGACGCATCATCCCCACCGGGGGT
GGAAATCTTCAAAGCCGGCCAGCTACCAGAGAATGCGGCTTACGGACACA
CGCCTCGTAGCAGTGCCTCTTGGTCAGTAGTCGATCCTCACACAAAACAT
GATAGTCTCGCCAATACTAGCACGTCTTCCTTGGACCAACGACCTGCCAA
GGACAGTCAGACCAGCTCTTCCCGAGATAGTCTCGACAGCGCAACGCAAG
CCTCCGAAATCTACGAACCTTTGCACTACCATCATCGACCGTACGAAGCT
CCCCAGCCTGCAAACCGACAATCACCAGCAAGTGGCTCATCCGAGAATCT
GCCGAAGCCACGCCCAGCCGCCAATCGTCGCTCGCTTTCGACACACTCGC
TCGGCTCCGACCTGGGTGAAAGACGGAGATCTTCTCGGCTCTCCCCATAC
CTTCACGCCCGTGCACCATCCCGTGAATCCAGTGTATCTCCTGATGTCCG
ACCAGTATCCTTCGTTGAACAGCTTAACAGCTGCTATCCGCAACCCGGAC
CTGCCCCTGTTCAGATTGACAACTCCCATCTGCAATCTGCTGTCGGCAAT
AACGCATCGCTGCTGAGCCACAAGCAAACGTTCGACATGTATCTGGCAAA
TGTCAAGAAGACTGATGACCCCGCCATCCAGTATGAGTTTGCCATCTTTA
TGGTGAATGCAATGTTGGAAATGCCTCCCGATGAGGTCGACGGTGCATCC
GCAGTGTATGGCCGGAAGGGAAGCGACATTAACCGTGCTAGCCTTCTACG
AGAGTCCAAATCCATCCTCCAGCGCCTGGCTGATCGTAGCTATCCCTTTG
CTCAATACTATCTGGCTGACGGATATGCTTCGGGGTTGTTCAGCAAAGGG
AAAGAGGACTATGACCGAGCGTTTCCACTGTTTCTAGCAGCCAGTAAACA
CGGACATGTCGAAGCATGCTACCGGACTGCTTTGTGCTATGAGTTTGGCT
GGGGTACCCGAGTTGAAGCCGCCCGGGCACAGCAGTTCTACCGCCAGGCA
GCATCCAAAAACCACCCCGGCGCGATGCTACGTATGGCGAAGGCCTGTCT
GGAGGGCGACATGGGGCTCGGAAAGCGCTATCGCGAAGGCATCAAGTGGA
TGAAACGCGCTACAGATTCATCCGATGCTCAGTATAACTCTGCTCCTTAC
GAATTAGGATTAATGCATGAAACGGGATATGGCGATGACGTATTTCCAGA
CCCTGCTTATGCTGCCCAGCTGTTCACTAAAGCAGCGGACTTAGGCCACA
TTGAGGCCAGCTATCGCTTGGGCGATGCCTACGAACACGGCAAACTCGAA
TGCCCCAGAGACCCTGCTTTGTCGATCCATTTCTATACCAACGCTGCACA
GGGTGGCCACCCTCTGGCCATGATGGCACTGTGTGCTTGGTACCTCATCG
GAGCAGAGCCGGTGCTTGAAAAGGATGAATATGAAGCCTACGAATGGGCT
AAACGTGCCGCGGAGACTGGTAAGACCTGTAATGTCTATCACGCAATCCA
TGGAATGCTGACGTTGCCGCAGGGCTCACCAAGGCGCAATATGCGGTTGG
ATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCTAGCAGCCA
ACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAGCTAAGCGC
CGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCCGGGAAGGC
CAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAAGAAAGGTG
CGTATGCCCTCTAA back to topCoding sequence (CDS) from alignment at An12:1259854..1261817+ >CBS51388_007812-T1 ID=CBS51388_007812-T1|Name=CBS51388_007812-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3822bp|location=Sequence derived from alignment at An12:1259854..1261817+ (Aspergillus niger CBS 513.88)
ATGCCGGAAGATCGCCCCGAAAGCCAACGGTATTCGGTTCCACGGGTCAG
AATCCATGGAGAAAGCGATCAGCCAGTGCCGGAGTTTCATGAGGATGGTT
TTGAAATGACGCTTCCCACTGATGAATTCGCCCAAATATCCCTCTCTGAG
CAGCAGCAGACTCATGGAAAGACCATCGACGCATCATCCCCACCGGGGGT
GGAAATCTTCAAAGCCGGCCAGCTACCAGAGAATGCGGCTTACGGACACA
CGCCTCGTAGCAGTGCCTCTTGGTCAGTAGTCGATCCTCACACAAAACAT
GATAGTCTCGCCAATACTAGCACGTCTTCCTTGGACCAACGACCTGCCAA
GGACAGTCAGACCAGCTCTTCCCGAGATAGTCTCGACAGCGCAACGCAAG
CCTCCGAAATCTACGAACCTTTGCACTACCATCATCGACCGTACGAAGCT
CCCCAGCCTGCAAACCGACAATCACCAGCAAGTGGCTCATCCGAGAATCT
GCCGAAGCCACGCCCAGCCGCCAATCGTCGCTCGCTTTCGACACACTCGC
TCGGCTCCGACCTGGGTGAAAGACGGAGATCTTCTCGGCTCTCCCCATAC
CTTCACGCCCGTGCACCATCCCGTGAATCCAGTGTATCTCCTGATGTCCG
ACCAGTATCCTTCGTTGAACAGCTTAACAGCTGCTATCCGCAACCCGGAC
CTGCCCCTGTTCAGATTGACAACTCCCATCTGCAATCTGCTGTCGGCAAT
AACGCATCGCTGCTGAGCCACAAGCAAACGTTCGACATGTATCTGGCAAA
TGTCAAGAAGACTGATGACCCCGCCATCCAGTATGAGTTTGCCATCTTTA
TGGTGAATGCAATGTTGGAAATGCCTCCCGATGAGGTCGACGGTGCATCC
GCAGTGTATGGCCGGAAGGGAAGCGACATTAACCGTGCTAGCCTTCTACG
AGAGTCCAAATCCATCCTCCAGCGCCTGGCTGATCGTAGCTATCCCTTTG
CTCAATACTATCTGGCTGACGGATATGCTTCGGGGTTGTTCAGCAAAGGG
AAAGAGGACTATGACCGAGCGTTTCCACTGTTTCTAGCAGCCAGTAAACA
CGGACATGTCGAAGCATGCTACCGGACTGCTTTGTGCTATGAGTTTGGCT
GGGGTACCCGAGTTGAAGCCGCCCGGGCACAGCAGTTCTACCGCCAGGCA
GCATCCAAAAACCACCCCGGCGCGATGCTACGTATGGCGAAGGCCTGTCT
GGAGGGCGACATGGGGCTCGGAAAGCGCTATCGCGAAGGCATCAAGTGGA
TGAAACGCGCTACAGATTCATCCGATGCTCAGTATAACTCTGCTCCTTAC
GAATTAGGATTAATGCATGAAACGGGATATGGCGATGACGTATTTCCAGA
CCCTGCTTATGCTGCCCAGCTGTTCACTAAAGCAGCGGACTTAGGCCACA
TTGAGGCCAGCTATCGCTTGGGCGATGCCTACGAACACGGCAAACTCGAA
TGCCCCAGAGACCCTGCTTTGTCGATCCATTTCTATACCAACGCTGCACA
GGGTGGCCACCCTCTGGCCATGATGGCACTGTGTGCTTGGTACCTCATCG
GAGCAGAGCCGGTGCTTGAAAAGGATGAATATGAAGCCTACGAATGGGCT
AAACGTGCCGCGGAGACTGGGCTCACCAAGGCGCAATATGCGGTTGGATA
CTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCTAGCAGCCAACG
TTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAGCTAAGCGCCGA
ATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCCGGGAAGGCCAG
TGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAAGAAAGGTGCGT
ATGCCCTCTAAATGCCGGAAGATCGCCCCGAAAGCCAACGGTATTCGGTT
CCACGGGTCAGAATCCATGGAGAAAGCGATCAGCCAGTGCCGGAGTTTCA
TGAGGATGGTTTTGAAATGACGCTTCCCACTGATGAATTCGCCCAAATAT
CCCTCTCTGAGCAGCAGCAGACTCATGGAAAGACCATCGACGCATCATCC
CCACCGGGGGTGGAAATCTTCAAAGCCGGCCAGCTACCAGAGAATGCGGC
TTACGGACACACGCCTCGTAGCAGTGCCTCTTGGTCAGTAGTCGATCCTC
ACACAAAACATGATAGTCTCGCCAATACTAGCACGTCTTCCTTGGACCAA
CGACCTGCCAAGGACAGTCAGACCAGCTCTTCCCGAGATAGTCTCGACAG
CGCAACGCAAGCCTCCGAAATCTACGAACCTTTGCACTACCATCATCGAC
CGTACGAAGCTCCCCAGCCTGCAAACCGACAATCACCAGCAAGTGGCTCA
TCCGAGAATCTGCCGAAGCCACGCCCAGCCGCCAATCGTCGCTCGCTTTC
GACACACTCGCTCGGCTCCGACCTGGGTGAAAGACGGAGATCTTCTCGGC
TCTCCCCATACCTTCACGCCCGTGCACCATCCCGTGAATCCAGTGTATCT
CCTGATGTCCGACCAGTATCCTTCGTTGAACAGCTTAACAGCTGCTATCC
GCAACCCGGACCTGCCCCTGTTCAGATTGACAACTCCCATCTGCAATCTG
CTGTCGGCAATAACGCATCGCTGCTGAGCCACAAGCAAACGTTCGACATG
TATCTGGCAAATGTCAAGAAGACTGATGACCCCGCCATCCAGTATGAGTT
TGCCATCTTTATGGTGAATGCAATGTTGGAAATGCCTCCCGATGAGGTCG
ACGGTGCATCCGCAGTGTATGGCCGGAAGGGAAGCGACATTAACCGTGCT
AGCCTTCTACGAGAGTCCAAATCCATCCTCCAGCGCCTGGCTGATCGTAG
CTATCCCTTTGCTCAATACTATCTGGCTGACGGATATGCTTCGGGGTTGT
TCAGCAAAGGGAAAGAGGACTATGACCGAGCGTTTCCACTGTTTCTAGCA
GCCAGTAAACACGGACATGTCGAAGCATGCTACCGGACTGCTTTGTGCTA
TGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGCCCGGGCACAGCAGTTCT
ACCGCCAGGCAGCATCCAAAAACCACCCCGGCGCGATGCTACGTATGGCG
AAGGCCTGTCTGGAGGGCGACATGGGGCTCGGAAAGCGCTATCGCGAAGG
CATCAAGTGGATGAAACGCGCTACAGATTCATCCGATGCTCAGTATAACT
CTGCTCCTTACGAATTAGGATTAATGCATGAAACGGGATATGGCGATGAC
GTATTTCCAGACCCTGCTTATGCTGCCCAGCTGTTCACTAAAGCAGCGGA
CTTAGGCCACATTGAGGCCAGCTATCGCTTGGGCGATGCCTACGAACACG
GCAAACTCGAATGCCCCAGAGACCCTGCTTTGTCGATCCATTTCTATACC
AACGCTGCACAGGGTGGCCACCCTCTGGCCATGATGGCACTGTGTGCTTG
GTACCTCATCGGAGCAGAGCCGGTGCTTGAAAAGGATGAATATGAAGCCT
ACGAATGGGCTAAACGTGCCGCGGAGACTGGGCTCACCAAGGCGCAATAT
GCGGTTGGATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCT
AGCAGCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAG
CTAAGCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCC
GGGAAGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAA
GAAAGGTGCGTATGCCCTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR006597 |
| DBxref | PFAM:PF08238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1259854..1261817 + |
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