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CBS51388_007813-T1, CBS51388_007813-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007813-T1
Unique NameCBS51388_007813-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1263927..1265978+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007813-T1 ID=CBS51388_007813-T1|Name=CBS51388_007813-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2052bp|location=Sequence derived from alignment at An12:1263927..1265978+ (Aspergillus niger CBS 513.88)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGATCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCATCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCATCACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGTGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCTTCGG
CGTGTGAGTTCCTCTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTAGAGGAGGGGGATGTGGAGGGAGAGGCGCC
GTGGGTGACACTGTATGCGTATAAGGCGTTTTTGGTCGCGTGGCAGTTGG
TTAGAGGGGGTGTGCCGGGGGCGATGGGGGTGGTGGGAGTGGGGGATGGG
GATGTGCGCGGTGCGGTGGAGTGGGCTAGGAGGGTGTTTGCTAGGAGGGA
GAGGTGGGTTATTGGGAGGTTGGTTTTGGGGTGTTTGGGGGGTTTAGATT
GA
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Coding sequence (CDS) from alignment at An12:1263927..1265978+

>CBS51388_007813-T1 ID=CBS51388_007813-T1|Name=CBS51388_007813-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2052bp|location=Sequence derived from alignment at An12:1263927..1265978+ (Aspergillus niger CBS 513.88)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGATCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCATCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCATCACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGTGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCTTCGG
CGTGTGAGTTCCTCTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTAGAGGAGGGGGATGTGGAGGGAGAGGCGCC
GTGGGTGACACTGTATGCGTATAAGGCGTTTTTGGTCGCGTGGCAGTTGG
TTAGAGGGGGTGTGCCGGGGGCGATGGGGGTGGTGGGAGTGGGGGATGGG
GATGTGCGCGGTGCGGTGGAGTGGGCTAGGAGGGTGTTTGCTAGGAGGGA
GAGGTGGGTTATTGGGAGGTTGGTTTTGGGGTGTTTGGGGGGTTTAGATT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007813CBS51388_007813Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007813-T1.exon1CBS51388_007813-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007813-T1.cdsCBS51388_007813-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007813-T1CBS51388_007813-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR013087
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1263927..1265978 +
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