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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1266087..1267607- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007814-T1 ID=CBS51388_007814-T1|Name=CBS51388_007814-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1521bp|location=Sequence derived from alignment at An12:1266087..1267607- (Aspergillus niger CBS 513.88)
ATGGATCTCAAAAAACGCCCCTCGTCCATTAAGTCGGAGGGTAATATCTC
CTCTGCAGAAGGACAGGTCAATGATGTCGTTGGTGATGCGTATGAGCGGA
TGCCAGAGTCGCTACGCAGTCTCAGCGAAGATGAGCGCCAACGCCTCAAT
CGGAGAATCGTCCGCAAGGTAGACCTCATGGTTCTGCCTACCATTGGCAT
CTTATACATTCTGAACTACATCGATCGTCAAAACCTTGCTTCGGCCAAGC
TGCAGGGCATCATGGAAGATCTCCAAATGTCAACCGAGCAATTCGCCACA
GCCGTCTCAATTCTCTTCGTCGGCTATCTGCCCTTCCAGATTCCCAGCAA
CCTCCTCATTACCAAGATTTCCCGGCCAGGTATGTACATCTGTCTTGCTG
TCTCCATCTGGGGCTGCATTTCAGCTGCAACCGCGGCTGTTCATAACTAC
GGCCAATTGCTCGCCGTGCGTGCAGTTCTTGGTATCGCCGAAGCCGTCTT
CTTCCCGGGTGCAATCTATTACCTCTCAGCCTGGTACACCAAAGCCGAGC
TGGGCAAGCGGATAGCCGGTCTCTACATTGCCCAACAAGTCGGCAACGCC
TTTGGTGGACTCTTCGCCGCTGCCATTCTTCAATTGGACGGTGTCCATAA
CATCGCTGGTTGGCAATGGCTCTTCATCATCGAAGGAAGCGCCACAGTCG
GCATCGGCATAATCTGCGCTTTAATAATGCCTGAATTTCCCCACAATAGT
CGCATCCTCTCCCCGATTGAGCGGGACTTCGCTGTCTGGCGCATCGAATC
CGAAGCCGGAGCCGCCGAGGGCACAGAGAACGAACCTATCCTTCGCGGAT
TCATCAAAGCCCTCTCCGACCCTAAACTCCTTCTTTTGATCTTCTCGAAC
ATGCTCTCTCAGACCCAAGGTTCCATCGCCAATTATTTCCCCACCTTGAT
CGGCTCCCTCGGCTTCTCTTCCAACACCATCAGCCTCCTCCTCACCGCAC
CGCCCTACATCCTCGCAGGCATAATCTACTATTTCATCATGTTCTACTCG
GATCGCTACAACACCATCTATCCTCTCATTCTGGGCTGCGTCTCCATCTC
CATCGTGATGTACATCATTCTCATGTCGACTTTGAACATTGGCGCACGAT
ACTTTGCCATGATGATCCTCCCGTTCGCCTCGGTTGGTCCACAGCTTCTC
CTCTACAAAACTATCAACTTGCATCTGGCCCGTCCAGTGTCTAAGCGCGC
TGCTGCTTCGGCTCTGGTGAATGCCATTGGCGGTACGTCGAACATCTGGG
CGTCGTATTTATACTACGATGGTCCGCACTTCTATGCGGCTTTTGGAACA
CTCATGGGCGCGGCATTCCTCTTGGCTGCTACGGTGACGGTGTATCGTTG
GTGCGTACGCCGCGAGAATAAGTATCTCGACTCTGGTGATCCAGACTTGA
TCGGCAAGGTAGTCAAGAGAGGTGTTACAGAAGAGATGGTGCAGCTCCGG
TGGCGATACGAGATGTACTGA back to topCoding sequence (CDS) from alignment at An12:1266087..1267607- >CBS51388_007814-T1 ID=CBS51388_007814-T1|Name=CBS51388_007814-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1521bp|location=Sequence derived from alignment at An12:1266087..1267607- (Aspergillus niger CBS 513.88)
ATGGATCTCAAAAAACGCCCCTCGTCCATTAAGTCGGAGGGTAATATCTC
CTCTGCAGAAGGACAGGTCAATGATGTCGTTGGTGATGCGTATGAGCGGA
TGCCAGAGTCGCTACGCAGTCTCAGCGAAGATGAGCGCCAACGCCTCAAT
CGGAGAATCGTCCGCAAGGTAGACCTCATGGTTCTGCCTACCATTGGCAT
CTTATACATTCTGAACTACATCGATCGTCAAAACCTTGCTTCGGCCAAGC
TGCAGGGCATCATGGAAGATCTCCAAATGTCAACCGAGCAATTCGCCACA
GCCGTCTCAATTCTCTTCGTCGGCTATCTGCCCTTCCAGATTCCCAGCAA
CCTCCTCATTACCAAGATTTCCCGGCCAGGTATGTACATCTGTCTTGCTG
TCTCCATCTGGGGCTGCATTTCAGCTGCAACCGCGGCTGTTCATAACTAC
GGCCAATTGCTCGCCGTGCGTGCAGTTCTTGGTATCGCCGAAGCCGTCTT
CTTCCCGGGTGCAATCTATTACCTCTCAGCCTGGTACACCAAAGCCGAGC
TGGGCAAGCGGATAGCCGGTCTCTACATTGCCCAACAAGTCGGCAACGCC
TTTGGTGGACTCTTCGCCGCTGCCATTCTTCAATTGGACGGTGTCCATAA
CATCGCTGGTTGGCAATGGCTCTTCATCATCGAAGGAAGCGCCACAGTCG
GCATCGGCATAATCTGCGCTTTAATAATGCCTGAATTTCCCCACAATAGT
CGCATCCTCTCCCCGATTGAGCGGGACTTCGCTGTCTGGCGCATCGAATC
CGAAGCCGGAGCCGCCGAGGGCACAGAGAACGAACCTATCCTTCGCGGAT
TCATCAAAGCCCTCTCCGACCCTAAACTCCTTCTTTTGATCTTCTCGAAC
ATGCTCTCTCAGACCCAAGGTTCCATCGCCAATTATTTCCCCACCTTGAT
CGGCTCCCTCGGCTTCTCTTCCAACACCATCAGCCTCCTCCTCACCGCAC
CGCCCTACATCCTCGCAGGCATAATCTACTATTTCATCATGTTCTACTCG
GATCGCTACAACACCATCTATCCTCTCATTCTGGGCTGCGTCTCCATCTC
CATCGTGATGTACATCATTCTCATGTCGACTTTGAACATTGGCGCACGAT
ACTTTGCCATGATGATCCTCCCGTTCGCCTCGGTTGGTCCACAGCTTCTC
CTCTACAAAACTATCAACTTGCATCTGGCCCGTCCAGTGTCTAAGCGCGC
TGCTGCTTCGGCTCTGGTGAATGCCATTGGCGGTACGTCGAACATCTGGG
CGTCGTATTTATACTACGATGGTCCGCACTTCTATGCGGCTTTTGGAACA
CTCATGGGCGCGGCATTCCTCTTGGCTGCTACGGTGACGGTGTATCGTTG
GTGCGTACGCCGCGAGAATAAGTATCTCGACTCTGGTGATCCAGACTTGA
TCGGCAAGGTAGTCAAGAGAGGTGTTACAGAAGAGATGGTGCAGCTCCGG
TGGCGATACGAGATGTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1266087..1267607 - |
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