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CBS51388_007829-T1, CBS51388_007829-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007829-T1
Unique NameCBS51388_007829-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1304845..1305860+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007829-T1 ID=CBS51388_007829-T1|Name=CBS51388_007829-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1016bp|location=Sequence derived from alignment at An12:1304845..1305860+ (Aspergillus niger CBS 513.88)
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAATTACTTCGTTGAGAATGTTGCTTCCTGTGAATTTGCGGCTG
CGTCATCCAATGCCAACAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCCGCTAAGACAGCGGGAGTAAAGCAT
GTATGCAACCCAATTCTATAACTGGCAATATTAAGCTCTAATAAACCCTA
GGTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGG
CTCCAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTAC
GTTGCGTCCTCTACCTCTACATGAATATTCCGACAGGCTCAACCAATGCT
AATTACATCAGGTCTGGTCTGGCATTTACCTCTATCCGAGAAGGTATATA
CGCGGAATGCTTCACCGTCTTTCTTGACTGGTACCCCGACAGAACGACAG
TCACGCTTCCAGCAGACGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTA
GGCGAAGCAACCGCGCGCATCATGATACGAGGTGGGTATGAGAATCAGAT
TGTTCTGTTCACTCCGGAGGAAACAATCACTGCCAAAGAAATAGTAGACA
TCATCAATGAGACTACTGGTCGACAGGTCAAGCTTAACGTGATCCCACGG
GAGAAGTACTTGCAATCAAGCAGTGTGAATGACCCGCGTGGCAAGCCGAA
GGAGCACTTTCAGATGATTGCAACGATATGGGACGAGATTTCAGGGGGCT
CCCTACGCACAACAGATCCGTTGATGTGCGAGATTCTCGGAAGAAAGCCT
ACCACACCTCAGGATGCTGTAAAGAAACTGTTGAAAGAAAATAGGGATTA
TGTGTTCATCTATTAG
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Coding sequence (CDS) from alignment at An12:1304845..1305860+

>CBS51388_007829-T1 ID=CBS51388_007829-T1|Name=CBS51388_007829-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2700bp|location=Sequence derived from alignment at An12:1304845..1305860+ (Aspergillus niger CBS 513.88)
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAATTACTTCGTTGAGAATGTTGCTTCCTGTGAATTTGCGGCTG
CGTCATCCAATGCCAACAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCCGCTAAGACAGCGGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCCAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGGCATTTACCTCTATCCGAGAAGGTATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACGCTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGGAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACTTGCAAT
CAAGCAGTGTGAATGACCCGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACGATATGGGACGAGATTTCAGGGGGCTCCCTACGCACAACAGA
TCCGTTGATGTGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAATTACTTCGTTGAGAATGTTGCTTCCTGTGAATTTGCGGCTG
CGTCATCCAATGCCAACAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCCGCTAAGACAGCGGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCCAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGGCATTTACCTCTATCCGAGAAGGTATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACGCTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGGAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACTTGCAAT
CAAGCAGTGTGAATGACCCGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACGATATGGGACGAGATTTCAGGGGGCTCCCTACGCACAACAGA
TCCGTTGATGTGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
ATGACACTGAAGTATCTCATCACTGGCGCCACTGGCGGCCTAGGACAGCA
GGTCTTGAATTACTTCGTTGAGAATGTTGCTTCCTGTGAATTTGCGGCTG
CGTCATCCAATGCCAACAACAAGAAGCTATTTGAAGATCGACGAATTGCC
TTCCGTCATATTAACTATGATGACCTTCATTCGCTCGAGACCGGATTTCG
TGACGTCGAGAACTTGCTCTTTGTCAGTACAAGTAGTGCGACCAGAAGCG
AGCAGCATGCCAGGGTCATAATGGCCGCTAAGACAGCGGGAGTAAAGCAT
GTGTGGTATACCTCACTTGCCTTTGGTGGGTTCACGGACGACTCCAAGGC
TCCAGTACAGCAGGACCATCTTCTTACCGAAAGACTGCTTAAAGAGTCTG
GTCTGGCATTTACCTCTATCCGAGAAGGTATATACGCGGAATGCTTCACC
GTCTTTCTTGACTGGTACCCCGACAGAACGACAGTCACGCTTCCAGCAGA
CGGAGAGGTTGCATATGCTCAGCGTGCAGAGCTAGGCGAAGCAACCGCGC
GCATCATGATACGAGGTGGGTATGAGAATCAGATTGTTCTGTTCACTCCG
GAGGAAACAATCACTGCCAAAGAAATAGTAGACATCATCAATGAGACTAC
TGGTCGACAGGTCAAGCTTAACGTGATCCCACGGGAGAAGTACTTGCAAT
CAAGCAGTGTGAATGACCCGCGTGGCAAGCCGAAGGAGCACTTTCAGATG
ATTGCAACGATATGGGACGAGATTTCAGGGGGCTCCCTACGCACAACAGA
TCCGTTGATGTGCGAGATTCTCGGAAGAAAGCCTACCACACCTCAGGATG
CTGTAAAGAAACTGTTGAAAGAAAATAGGGATTATGTGTTCATCTATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007829CBS51388_007829Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007829-T1.exon1CBS51388_007829-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007829-T1.exon2CBS51388_007829-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007829-T1.exon3CBS51388_007829-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007829-T1.cdsCBS51388_007829-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007829-T1CBS51388_007829-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1304845..1305860 +
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