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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1360578..1362204+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007846-T1 ID=CBS51388_007846-T1|Name=CBS51388_007846-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1627bp|location=Sequence derived from alignment at An12:1360578..1362204+ (Aspergillus niger CBS 513.88)
ATGGGCGGCATCCCCTTCACATCGCGCGCCTGTGCAGCCTGTAAGAAGCG
CAAGATCAAGGTCAGTCCAGAAGTTTTCCCATCGTACCATTAATCGGTGA
CTAAACCCGGCAGTGTGACCTAGAAAAGCCCGAATGCTCTAGTTGCGTCA
AAAGAGGGGGGACGCCTTGCCCCGGTTATCACGATCGGGACTTCATCCAC
CACAAGTTTGAGCCCCGGCGTGTGCGCAATGCAGAGACCAAGCGACCTGG
ACCCCAGCGGGTCAGACAGCTCGAGTCCCTGGCTTTGCCTGCTTGCTTCA
ATATGAGTGCCGAGGCTCGCACCCAGTTGTTTGCGACCTACATGCACACG
TTCTTCGCCTCCAATCCTTCCCTCAATGGCAGGGTCGATAGCTGGTATCT
GTTGATGGCGCGCTTTCCAACCTTGACCGGCAAATCAGACCTGCTGGATC
GATCGGTCATCGGCTTGGTCTCCGTGTATCTGGGGAAGAAAACCAGGGAT
GGTCGATTGGCACATCATGGATTTGAGATCTACAATAGTGCTCTCCATGC
GATGCTACAGATCTTGCAAGGCAACCGCCCACCAACAGCTACCACTCTCT
ACTCGGCCATTGTCTTCCAGACGTACGAGGTGAGTACGATGCAGTCCAAG
AGATGCATTTATTCTGACAGGCCGCAGACTATGGGACTTAGTGAGACGCT
ATGGCGTAACTGTCTTACCCACATACAGGGAGCCACGGCAATGTTGAAAC
AACACGACTATACCCGAGGTGATCAAGCCCTCATCGACGCGATCCTCCGG
AGGCACAAGTGGGCGACGGTCAGTCTAGGTCGAATTTGATGAAAAGCTTA
CTGACACTTATCTAGGCAATGTTCACCCTCAACACTCCTTACAGCATGCA
AGTGGACGAGGAATGCCTCAATCTCGGACGCAAAGAGAGCCCCGTCGACG
AGTTATTCGGCATAATCGCCGAAGCCATAGCTCTACGCAGAGATCTATGT
AAACTCATATGAAAGCCGCATGACGATCGGGAACACGCATGCCACGCACT
ATTGCAGCGCTGTTTTAACCTTGAGGCACGTGTGCACGTAGACTGGCTGC
ACATGTCCGCTCACAGGCTGGACGGTATACCTACTCCCTGTAGCAGGCGG
AACCTGGGCCAGGAGCCCAGCATGCTCCCCCTGGACCCAGATCTCGCACC
GTACAATATCGAAAGCCTCGAAGCAGCCAAGATCTACCTCCTATTTTGGG
TGGCCTCCCTGGTCATCCGTCGCGTGATCTATCAAACCGAGACGCACCTG
ATGCGAGGCCCTGACCCGAGCCGCATGGTGTTCTATGCCAGGGAGATTTG
CCGCTCTGTAGCATATCTCATGCAGCCCGAGAATCGGATGTCGTCCGGGC
AAATCCTCATCCTGGGGCTATCCCAGGCGTCCAAATGTTATATCGACTGC
GGGGACAAGGCTGAGTTCGAGTGGTGCCAGGCAATCTACCCGTTCATTGC
TGCGAGCGGCTTTGGTATCGCCAGTCTTATGGGCCAGATGGAGTGGAAGT
TCTGGAATGCGGCTCAGAGCCAGCCAAGAGGATCTCTCTTGTTATTACCT
GAGGCGGTACATGTTAGTTCGATATAA back to topCoding sequence (CDS) from alignment at An12:1360578..1362204+ >CBS51388_007846-T1 ID=CBS51388_007846-T1|Name=CBS51388_007846-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6675bp|location=Sequence derived from alignment at An12:1360578..1362204+ (Aspergillus niger CBS 513.88)
ATGGGCGGCATCCCCTTCACATCGCGCGCCTGTGCAGCCTGTAAGAAGCG
CAAGATCAAGTGTGACCTAGAAAAGCCCGAATGCTCTAGTTGCGTCAAAA
GAGGGGGGACGCCTTGCCCCGGTTATCACGATCGGGACTTCATCCACCAC
AAGTTTGAGCCCCGGCGTGTGCGCAATGCAGAGACCAAGCGACCTGGACC
CCAGCGGGTCAGACAGCTCGAGTCCCTGGCTTTGCCTGCTTGCTTCAATA
TGAGTGCCGAGGCTCGCACCCAGTTGTTTGCGACCTACATGCACACGTTC
TTCGCCTCCAATCCTTCCCTCAATGGCAGGGTCGATAGCTGGTATCTGTT
GATGGCGCGCTTTCCAACCTTGACCGGCAAATCAGACCTGCTGGATCGAT
CGGTCATCGGCTTGGTCTCCGTGTATCTGGGGAAGAAAACCAGGGATGGT
CGATTGGCACATCATGGATTTGAGATCTACAATAGTGCTCTCCATGCGAT
GCTACAGATCTTGCAAGGCAACCGCCCACCAACAGCTACCACTCTCTACT
CGGCCATTGTCTTCCAGACGTACGAGGGAGCCACGGCAATGTTGAAACAA
CACGACTATACCCGAGGTGATCAAGCCCTCATCGACGCGATCCTCCGGAG
GCACAAGTGGGCGACGGCAATGTTCACCCTCAACACTCCTTACAGCATGC
AAGTGGACGAGGAATGCCTCAATCTCGGACGCAAAGAGAGCCCCGTCGAC
GAGTTATTCGGCATAATCGCCGAAGCCATAGCTCTACGCAGAGATCTATA
CTGGCTGCACATGTCCGCTCACAGGCTGGACGGTATACCTACTCCCTGTA
GCAGGCGGAACCTGGGCCAGGAGCCCAGCATGCTCCCCCTGGACCCAGAT
CTCGCACCGTACAATATCGAAAGCCTCGAAGCAGCCAAGATCTACCTCCT
ATTTTGGGTGGCCTCCCTGGTCATCCGTCGCGTGATCTATCAAACCGAGA
CGCACCTGATGCGAGGCCCTGACCCGAGCCGCATGGTGTTCTATGCCAGG
GAGATTTGCCGCTCTGTAGCATATCTCATGCAGCCCGAGAATCGGATGTC
GTCCGGGCAAATCCTCATCCTGGGGCTATCCCAGGCGTCCAAATGTTATA
TCGACTGCGGGGACAAGGCTGAGTTCGAGTGGTGCCAGGCAATCTACCCG
TTCATTGCTGCGAGCGGCTTTGGTATCGCCAGTCTTATGGGCCAGATGGA
GTGGAAGTTCTGGAATGCGGCTCAGAGCCAGCCAAGAGGATCTCTCTTGT
TATTACCTGAGGCGGTACATGTTAGTTCGATATAAATGGGCGGCATCCCC
TTCACATCGCGCGCCTGTGCAGCCTGTAAGAAGCGCAAGATCAAGTGTGA
CCTAGAAAAGCCCGAATGCTCTAGTTGCGTCAAAAGAGGGGGGACGCCTT
GCCCCGGTTATCACGATCGGGACTTCATCCACCACAAGTTTGAGCCCCGG
CGTGTGCGCAATGCAGAGACCAAGCGACCTGGACCCCAGCGGGTCAGACA
GCTCGAGTCCCTGGCTTTGCCTGCTTGCTTCAATATGAGTGCCGAGGCTC
GCACCCAGTTGTTTGCGACCTACATGCACACGTTCTTCGCCTCCAATCCT
TCCCTCAATGGCAGGGTCGATAGCTGGTATCTGTTGATGGCGCGCTTTCC
AACCTTGACCGGCAAATCAGACCTGCTGGATCGATCGGTCATCGGCTTGG
TCTCCGTGTATCTGGGGAAGAAAACCAGGGATGGTCGATTGGCACATCAT
GGATTTGAGATCTACAATAGTGCTCTCCATGCGATGCTACAGATCTTGCA
AGGCAACCGCCCACCAACAGCTACCACTCTCTACTCGGCCATTGTCTTCC
AGACGTACGAGGGAGCCACGGCAATGTTGAAACAACACGACTATACCCGA
GGTGATCAAGCCCTCATCGACGCGATCCTCCGGAGGCACAAGTGGGCGAC
GGCAATGTTCACCCTCAACACTCCTTACAGCATGCAAGTGGACGAGGAAT
GCCTCAATCTCGGACGCAAAGAGAGCCCCGTCGACGAGTTATTCGGCATA
ATCGCCGAAGCCATAGCTCTACGCAGAGATCTATACTGGCTGCACATGTC
CGCTCACAGGCTGGACGGTATACCTACTCCCTGTAGCAGGCGGAACCTGG
GCCAGGAGCCCAGCATGCTCCCCCTGGACCCAGATCTCGCACCGTACAAT
ATCGAAAGCCTCGAAGCAGCCAAGATCTACCTCCTATTTTGGGTGGCCTC
CCTGGTCATCCGTCGCGTGATCTATCAAACCGAGACGCACCTGATGCGAG
GCCCTGACCCGAGCCGCATGGTGTTCTATGCCAGGGAGATTTGCCGCTCT
GTAGCATATCTCATGCAGCCCGAGAATCGGATGTCGTCCGGGCAAATCCT
CATCCTGGGGCTATCCCAGGCGTCCAAATGTTATATCGACTGCGGGGACA
AGGCTGAGTTCGAGTGGTGCCAGGCAATCTACCCGTTCATTGCTGCGAGC
GGCTTTGGTATCGCCAGTCTTATGGGCCAGATGGAGTGGAAGTTCTGGAA
TGCGGCTCAGAGCCAGCCAAGAGGATCTCTCTTGTTATTACCTGAGGCGG
TACATGTTAGTTCGATATAAATGGGCGGCATCCCCTTCACATCGCGCGCC
TGTGCAGCCTGTAAGAAGCGCAAGATCAAGTGTGACCTAGAAAAGCCCGA
ATGCTCTAGTTGCGTCAAAAGAGGGGGGACGCCTTGCCCCGGTTATCACG
ATCGGGACTTCATCCACCACAAGTTTGAGCCCCGGCGTGTGCGCAATGCA
GAGACCAAGCGACCTGGACCCCAGCGGGTCAGACAGCTCGAGTCCCTGGC
TTTGCCTGCTTGCTTCAATATGAGTGCCGAGGCTCGCACCCAGTTGTTTG
CGACCTACATGCACACGTTCTTCGCCTCCAATCCTTCCCTCAATGGCAGG
GTCGATAGCTGGTATCTGTTGATGGCGCGCTTTCCAACCTTGACCGGCAA
ATCAGACCTGCTGGATCGATCGGTCATCGGCTTGGTCTCCGTGTATCTGG
GGAAGAAAACCAGGGATGGTCGATTGGCACATCATGGATTTGAGATCTAC
AATAGTGCTCTCCATGCGATGCTACAGATCTTGCAAGGCAACCGCCCACC
AACAGCTACCACTCTCTACTCGGCCATTGTCTTCCAGACGTACGAGGGAG
CCACGGCAATGTTGAAACAACACGACTATACCCGAGGTGATCAAGCCCTC
ATCGACGCGATCCTCCGGAGGCACAAGTGGGCGACGGCAATGTTCACCCT
CAACACTCCTTACAGCATGCAAGTGGACGAGGAATGCCTCAATCTCGGAC
GCAAAGAGAGCCCCGTCGACGAGTTATTCGGCATAATCGCCGAAGCCATA
GCTCTACGCAGAGATCTATACTGGCTGCACATGTCCGCTCACAGGCTGGA
CGGTATACCTACTCCCTGTAGCAGGCGGAACCTGGGCCAGGAGCCCAGCA
TGCTCCCCCTGGACCCAGATCTCGCACCGTACAATATCGAAAGCCTCGAA
GCAGCCAAGATCTACCTCCTATTTTGGGTGGCCTCCCTGGTCATCCGTCG
CGTGATCTATCAAACCGAGACGCACCTGATGCGAGGCCCTGACCCGAGCC
GCATGGTGTTCTATGCCAGGGAGATTTGCCGCTCTGTAGCATATCTCATG
CAGCCCGAGAATCGGATGTCGTCCGGGCAAATCCTCATCCTGGGGCTATC
CCAGGCGTCCAAATGTTATATCGACTGCGGGGACAAGGCTGAGTTCGAGT
GGTGCCAGGCAATCTACCCGTTCATTGCTGCGAGCGGCTTTGGTATCGCC
AGTCTTATGGGCCAGATGGAGTGGAAGTTCTGGAATGCGGCTCAGAGCCA
GCCAAGAGGATCTCTCTTGTTATTACCTGAGGCGGTACATGTTAGTTCGA
TATAAATGGGCGGCATCCCCTTCACATCGCGCGCCTGTGCAGCCTGTAAG
AAGCGCAAGATCAAGTGTGACCTAGAAAAGCCCGAATGCTCTAGTTGCGT
CAAAAGAGGGGGGACGCCTTGCCCCGGTTATCACGATCGGGACTTCATCC
ACCACAAGTTTGAGCCCCGGCGTGTGCGCAATGCAGAGACCAAGCGACCT
GGACCCCAGCGGGTCAGACAGCTCGAGTCCCTGGCTTTGCCTGCTTGCTT
CAATATGAGTGCCGAGGCTCGCACCCAGTTGTTTGCGACCTACATGCACA
CGTTCTTCGCCTCCAATCCTTCCCTCAATGGCAGGGTCGATAGCTGGTAT
CTGTTGATGGCGCGCTTTCCAACCTTGACCGGCAAATCAGACCTGCTGGA
TCGATCGGTCATCGGCTTGGTCTCCGTGTATCTGGGGAAGAAAACCAGGG
ATGGTCGATTGGCACATCATGGATTTGAGATCTACAATAGTGCTCTCCAT
GCGATGCTACAGATCTTGCAAGGCAACCGCCCACCAACAGCTACCACTCT
CTACTCGGCCATTGTCTTCCAGACGTACGAGGGAGCCACGGCAATGTTGA
AACAACACGACTATACCCGAGGTGATCAAGCCCTCATCGACGCGATCCTC
CGGAGGCACAAGTGGGCGACGGCAATGTTCACCCTCAACACTCCTTACAG
CATGCAAGTGGACGAGGAATGCCTCAATCTCGGACGCAAAGAGAGCCCCG
TCGACGAGTTATTCGGCATAATCGCCGAAGCCATAGCTCTACGCAGAGAT
CTATACTGGCTGCACATGTCCGCTCACAGGCTGGACGGTATACCTACTCC
CTGTAGCAGGCGGAACCTGGGCCAGGAGCCCAGCATGCTCCCCCTGGACC
CAGATCTCGCACCGTACAATATCGAAAGCCTCGAAGCAGCCAAGATCTAC
CTCCTATTTTGGGTGGCCTCCCTGGTCATCCGTCGCGTGATCTATCAAAC
CGAGACGCACCTGATGCGAGGCCCTGACCCGAGCCGCATGGTGTTCTATG
CCAGGGAGATTTGCCGCTCTGTAGCATATCTCATGCAGCCCGAGAATCGG
ATGTCGTCCGGGCAAATCCTCATCCTGGGGCTATCCCAGGCGTCCAAATG
TTATATCGACTGCGGGGACAAGGCTGAGTTCGAGTGGTGCCAGGCAATCT
ACCCGTTCATTGCTGCGAGCGGCTTTGGTATCGCCAGTCTTATGGGCCAG
ATGGAGTGGAAGTTCTGGAATGCGGCTCAGAGCCAGCCAAGAGGATCTCT
CTTGTTATTACCTGAGGCGGTACATGTTAGTTCGATATAAATGGGCGGCA
TCCCCTTCACATCGCGCGCCTGTGCAGCCTGTAAGAAGCGCAAGATCAAG
TGTGACCTAGAAAAGCCCGAATGCTCTAGTTGCGTCAAAAGAGGGGGGAC
GCCTTGCCCCGGTTATCACGATCGGGACTTCATCCACCACAAGTTTGAGC
CCCGGCGTGTGCGCAATGCAGAGACCAAGCGACCTGGACCCCAGCGGGTC
AGACAGCTCGAGTCCCTGGCTTTGCCTGCTTGCTTCAATATGAGTGCCGA
GGCTCGCACCCAGTTGTTTGCGACCTACATGCACACGTTCTTCGCCTCCA
ATCCTTCCCTCAATGGCAGGGTCGATAGCTGGTATCTGTTGATGGCGCGC
TTTCCAACCTTGACCGGCAAATCAGACCTGCTGGATCGATCGGTCATCGG
CTTGGTCTCCGTGTATCTGGGGAAGAAAACCAGGGATGGTCGATTGGCAC
ATCATGGATTTGAGATCTACAATAGTGCTCTCCATGCGATGCTACAGATC
TTGCAAGGCAACCGCCCACCAACAGCTACCACTCTCTACTCGGCCATTGT
CTTCCAGACGTACGAGGGAGCCACGGCAATGTTGAAACAACACGACTATA
CCCGAGGTGATCAAGCCCTCATCGACGCGATCCTCCGGAGGCACAAGTGG
GCGACGGCAATGTTCACCCTCAACACTCCTTACAGCATGCAAGTGGACGA
GGAATGCCTCAATCTCGGACGCAAAGAGAGCCCCGTCGACGAGTTATTCG
GCATAATCGCCGAAGCCATAGCTCTACGCAGAGATCTATACTGGCTGCAC
ATGTCCGCTCACAGGCTGGACGGTATACCTACTCCCTGTAGCAGGCGGAA
CCTGGGCCAGGAGCCCAGCATGCTCCCCCTGGACCCAGATCTCGCACCGT
ACAATATCGAAAGCCTCGAAGCAGCCAAGATCTACCTCCTATTTTGGGTG
GCCTCCCTGGTCATCCGTCGCGTGATCTATCAAACCGAGACGCACCTGAT
GCGAGGCCCTGACCCGAGCCGCATGGTGTTCTATGCCAGGGAGATTTGCC
GCTCTGTAGCATATCTCATGCAGCCCGAGAATCGGATGTCGTCCGGGCAA
ATCCTCATCCTGGGGCTATCCCAGGCGTCCAAATGTTATATCGACTGCGG
GGACAAGGCTGAGTTCGAGTGGTGCCAGGCAATCTACCCGTTCATTGCTG
CGAGCGGCTTTGGTATCGCCAGTCTTATGGGCCAGATGGAGTGGAAGTTC
TGGAATGCGGCTCAGAGCCAGCCAAGAGGATCTCTCTTGTTATTACCTGA
GGCGGTACATGTTAGTTCGATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1360578..1362204 + |
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