|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1402918..1406397- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007863-T1 ID=CBS51388_007863-T1|Name=CBS51388_007863-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3480bp|location=Sequence derived from alignment at An12:1402918..1406397- (Aspergillus niger CBS 513.88)
ATGACAGCCTCCATTGAAATACTGCAGTCCGATTATGATTTGAAATTTCA
ACCAGTGGATTCGTCCCTCCATGAGCGACTATCTGACTTTCTTAAGACCA
GGGCGAATCTGGTGGAGGAGAAGAAGTGGATGATACACCTAGGAACCCAT
ACCATCATCGTCCGGGACCAACTTACCAAGGCGTTCCAAAACATCCTGGC
AGTGAAAGATATTGTGACTACTGCGGCAAATGCAAGTCTCCCAGCCTCAC
TTGCCTGTGCTGGAATAATGGCCTGCTTTACGGTGAGCACTGGTTTAGTA
CTATTCCTGGCAACAAATGGCCTATTGTCTAACGATGTTTAGACGGTCAT
CCAAGCAGCAGAGCAGCATTCCCATCTCCTGCAAGGATTAGAATCTATTT
CTGAGTTAATTTGCCGATTGCATGTAATGGAGCGCCTTTATCTGCACTCG
GACACAAAACAGAACATTGGCCTCCTTGATGACCTTCGGAAAACTATGAT
TTCATTTTACTCAAAGATACTGGAATTCCAGGCCCGAGCGCTCTGCTATT
TACACAGACCTCGAGCATACCAATTCTGGAGAGATGTCCTTAACCGCGAC
GGCTGGGCTAACCTGCTGCAAGAATTTGAGAGATACCAGATCACACTAGG
TCGAACTACTTCCGTTATTGCAGATGCAGGATCAATGCAAAGATACGAAG
AGCTTCAGGACAAGTACAAAAGAATATTGGAGGCCTTACACAATCGCAAC
ATATGGACAGCTACATCCGATCGAGATGAGAAGGTGAAACGATTCCTCAA
CCTGCTCTACACCTGTCCCTATAAGGACCGAAAAGACCGAAACAGCAAGC
GTGTCCTTGGAACCTGTGAATGGTTCATAGGGCATGAGAAATTCCATGCC
TGGCAAGGGAGTTCAGGAAATGGCCTCTCAAGTCTACTATGGGTGTCGGC
TGATCCAGGATGTGGCAAGTCAGTCTTAACTCGATATCTGGTGGATGAGG
TTCTTGTCAGCAATGATAAGCGAACAGTCTGCTATTTCTTCTTTAAAGAT
GACTTTACCGACCAGAAGAGCGCAACAAGCGCGCTTTCAGTCATATTAAG
GCAGCTATTCATAGCGCAGCCTCACCTTTTGCACGACGCAATACTGGATA
AAGCGGACACTGACAGTAGCAAGCTTACTCAGTCATTCTCAGAGCTGTGG
AGTATACTCATGTCTGTTTCGACCGATCCAAAGGCGGCAGAAATATATTG
TCTCCTTGATGCCTTAGACGAATGCCATGACGAGGACCGGAGCCGGCTCA
TCAACGCTGTCAACGACTTTTATGCAAACACCCACAAGAATAGCAAACTG
AAGTTCTTGATTACAAGTAGACCATATGAGCATATACGGCGTGGATTCTC
CCCTCTTATCACAGAATCACCCACCATCCACTTAAGTGGTGACGACGGGG
AAGAGGCTGAGCAGATATCTCATGAAATAAATCTTGTCATCCGAAAAAGA
GTGCAGGACATCAGCAAGCAAAGATCGCTGATGAAGGAGGAATGCACAAT
GCTCATAGACAGGCTTACTGCGGTTCAAAATCGAACTTATCTGTGGGTGA
GTCTGATATTAGATGTCCTCGAGAATACCCCGGAGTTCTCAAAAGGTAAA
GTCCATCGGATACTGAGTGACCTACCCACCACCGTTGACTGTGCCTATGA
GAGAATCTTGGATCGAAGTCCAGATAAGGAAAAGGCTAAGATAACTCTCC
ATATTATTACGGCAGCTATGCGACCTCTTTCCTTGGAAGAACTATCTCTG
GCCCTAGCACTCAGCGCAGGCTATCAAGCCCCAACAGATATAGTTGATAA
CATGGAGCCAACGCATCGCTTCAAAAAGACCCTAAGAGACCTTTGCGGGC
TCTTTGTGATCATTCTGGATGACAAGGTCTATCTTCTGCATCAGACGGCG
AAAGAGTTTTTGGTTCGGGACAACAACTCTATCCTGGACAAAACCCTCTC
CCAACCCACAACAGGGTGGAAGTATTCACTCCTTCCAGGTGAATCGAACC
GGATCCTTGCGGGAATATGCATTTCCTGTATATCTCTTGATCCAGAAAAC
TTTCCTCAGAAATGTATGCTAGAGTACTCATCATCTTACTGGGACACTCA
TTTCCGTCAAGCTTGCATTCCAGACGAAGACCCGCTAATAGACCGCGCGA
AGTTACTTTGCGAACCATGGTCGGATATATTTCAAACATGGTCGAGGATT
TATGCTGTCAAAACAGATAATATTCCTGACAGCACTTCATCACTTTTGAT
TGCATCATCCATGGGGCTTATCGGCGTGGTTAAGTCCATTCTTCCTACAG
GAAAAGCAAACCTTAACTCAAAGGATTCGGATTACGATCAGACACCATTA
TCATGGGCAGCGGAACGTGGCCACGTGGCAGTTGTGAAGCTTCTGCTTGC
CGCAGAGGAAGTGGACATCGACTCGAGGAACTCAATTGGCCGAAGCCCAC
TGTCATTAGCAGCTCAGAATGGTCACGACGAAGTGGTGAAGCTCCTAATC
CGTGAAGATGTGGACATCGATTCGAAGGATGTGCCTGGCAGTACGCCGCT
AGCACTGGCAGCTGAGAATGGCCACGAGAGAATAGTTCGCCTTCTACTTG
CTACAGGAAAGGCCGACATCGACTCCAGAGATTCATCTGGAAATAGTCCC
CTGTCGTTGGCAGCACAGTTTGGCCACGAGGCAGTGGTAAAAATCGTCCT
TGCTACTGGAGAGGTTGATGTCAATAACAAGGATTCAAGGGGCAAGACCC
CAATATCCTGGGCAGCAAGGGAAGGCTACGAAGCAGTAGTAAGGCGCCTT
CTCGATACAGGAAAGGTAGAAGTTGACTGCAAGGACTCCGATAACGGTAC
TCCTCTGCTTTTGGCAGCAATAGAAGGTTGTGAGGGAATTGTGAAGCGAT
TGCTTGCTACTGGACAGGTTGATGTTAACATAAGAGATCGAAGATATGGT
AGGGAGCCGCTTTCCTGGGCTGCTGGGGAAGGCCACGAGGCAGTGGTTAA
GCTGCTTCTTTCTACCCGGGAGGTGGATGTTGATGTAAGGGATCCGAGAT
ATGGCAGGTCACCGCTTTCGTGGGCTGCTGGGGAAGGCCACGAGGAAGTG
GTTGAACTTCTGCTTGCTACGGGAAAGGTAGATGTTGAATCGAAAAGCAT
AAGGGGTCGTACTCCCCTTTCTTGGGCGGCGTGGGAGGGTCATGACATAG
TGGTAAAACTCCTGCTCGCTACTGGTGAGGTGGTTGTCAACAGCAGAGAT
TCGGAGGGTCGTACGCCGCTGTCTTGGGCAGCGGAGAATGGCAACGAGGC
TGTGATAAAGCTCCTCATTGCTACGGGAAATGCAGATGTTAGCGCCAGGG
ATGTAAATGGGCGCACACCTCAGGATTGGGCGGCAGAGTATGATCACCAG
AGTGTGGTGAAAATTTTTCGGATGTGCTAG back to topCoding sequence (CDS) from alignment at An12:1402918..1406397- >CBS51388_007863-T1 ID=CBS51388_007863-T1|Name=CBS51388_007863-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6840bp|location=Sequence derived from alignment at An12:1402918..1406397- (Aspergillus niger CBS 513.88)
ACGGTCATCCAAGCAGCAGAGCAGCATTCCCATCTCCTGCAAGGATTAGA
ATCTATTTCTGAGTTAATTTGCCGATTGCATGTAATGGAGCGCCTTTATC
TGCACTCGGACACAAAACAGAACATTGGCCTCCTTGATGACCTTCGGAAA
ACTATGATTTCATTTTACTCAAAGATACTGGAATTCCAGGCCCGAGCGCT
CTGCTATTTACACAGACCTCGAGCATACCAATTCTGGAGAGATGTCCTTA
ACCGCGACGGCTGGGCTAACCTGCTGCAAGAATTTGAGAGATACCAGATC
ACACTAGGTCGAACTACTTCCGTTATTGCAGATGCAGGATCAATGCAAAG
ATACGAAGAGCTTCAGGACAAGTACAAAAGAATATTGGAGGCCTTACACA
ATCGCAACATATGGACAGCTACATCCGATCGAGATGAGAAGGTGAAACGA
TTCCTCAACCTGCTCTACACCTGTCCCTATAAGGACCGAAAAGACCGAAA
CAGCAAGCGTGTCCTTGGAACCTGTGAATGGTTCATAGGGCATGAGAAAT
TCCATGCCTGGCAAGGGAGTTCAGGAAATGGCCTCTCAAGTCTACTATGG
GTGTCGGCTGATCCAGGATGTGGCAAGTCAGTCTTAACTCGATATCTGGT
GGATGAGGTTCTTGTCAGCAATGATAAGCGAACAGTCTGCTATTTCTTCT
TTAAAGATGACTTTACCGACCAGAAGAGCGCAACAAGCGCGCTTTCAGTC
ATATTAAGGCAGCTATTCATAGCGCAGCCTCACCTTTTGCACGACGCAAT
ACTGGATAAAGCGGACACTGACAGTAGCAAGCTTACTCAGTCATTCTCAG
AGCTGTGGAGTATACTCATGTCTGTTTCGACCGATCCAAAGGCGGCAGAA
ATATATTGTCTCCTTGATGCCTTAGACGAATGCCATGACGAGGACCGGAG
CCGGCTCATCAACGCTGTCAACGACTTTTATGCAAACACCCACAAGAATA
GCAAACTGAAGTTCTTGATTACAAGTAGACCATATGAGCATATACGGCGT
GGATTCTCCCCTCTTATCACAGAATCACCCACCATCCACTTAAGTGGTGA
CGACGGGGAAGAGGCTGAGCAGATATCTCATGAAATAAATCTTGTCATCC
GAAAAAGAGTGCAGGACATCAGCAAGCAAAGATCGCTGATGAAGGAGGAA
TGCACAATGCTCATAGACAGGCTTACTGCGGTTCAAAATCGAACTTATCT
GTGGGTGAGTCTGATATTAGATGTCCTCGAGAATACCCCGGAGTTCTCAA
AAGGTAAAGTCCATCGGATACTGAGTGACCTACCCACCACCGTTGACTGT
GCCTATGAGAGAATCTTGGATCGAAGTCCAGATAAGGAAAAGGCTAAGAT
AACTCTCCATATTATTACGGCAGCTATGCGACCTCTTTCCTTGGAAGAAC
TATCTCTGGCCCTAGCACTCAGCGCAGGCTATCAAGCCCCAACAGATATA
GTTGATAACATGGAGCCAACGCATCGCTTCAAAAAGACCCTAAGAGACCT
TTGCGGGCTCTTTGTGATCATTCTGGATGACAAGGTCTATCTTCTGCATC
AGACGGCGAAAGAGTTTTTGGTTCGGGACAACAACTCTATCCTGGACAAA
ACCCTCTCCCAACCCACAACAGGGTGGAAGTATTCACTCCTTCCAGGTGA
ATCGAACCGGATCCTTGCGGGAATATGCATTTCCTGTATATCTCTTGATC
CAGAAAACTTTCCTCAGAAATGTATGCTAGAGTACTCATCATCTTACTGG
GACACTCATTTCCGTCAAGCTTGCATTCCAGACGAAGACCCGCTAATAGA
CCGCGCGAAGTTACTTTGCGAACCATGGTCGGATATATTTCAAACATGGT
CGAGGATTTATGCTGTCAAAACAGATAATATTCCTGACAGCACTTCATCA
CTTTTGATTGCATCATCCATGGGGCTTATCGGCGTGGTTAAGTCCATTCT
TCCTACAGGAAAAGCAAACCTTAACTCAAAGGATTCGGATTACGATCAGA
CACCATTATCATGGGCAGCGGAACGTGGCCACGTGGCAGTTGTGAAGCTT
CTGCTTGCCGCAGAGGAAGTGGACATCGACTCGAGGAACTCAATTGGCCG
AAGCCCACTGTCATTAGCAGCTCAGAATGGTCACGACGAAGTGGTGAAGC
TCCTAATCCGTGAAGATGTGGACATCGATTCGAAGGATGTGCCTGGCAGT
ACGCCGCTAGCACTGGCAGCTGAGAATGGCCACGAGAGAATAGTTCGCCT
TCTACTTGCTACAGGAAAGGCCGACATCGACTCCAGAGATTCATCTGGAA
ATAGTCCCCTGTCGTTGGCAGCACAGTTTGGCCACGAGGCAGTGGTAAAA
ATCGTCCTTGCTACTGGAGAGGTTGATGTCAATAACAAGGATTCAAGGGG
CAAGACCCCAATATCCTGGGCAGCAAGGGAAGGCTACGAAGCAGTAGTAA
GGCGCCTTCTCGATACAGGAAAGGTAGAAGTTGACTGCAAGGACTCCGAT
AACGGTACTCCTCTGCTTTTGGCAGCAATAGAAGGTTGTGAGGGAATTGT
GAAGCGATTGCTTGCTACTGGACAGGTTGATGTTAACATAAGAGATCGAA
GATATGGTAGGGAGCCGCTTTCCTGGGCTGCTGGGGAAGGCCACGAGGCA
GTGGTTAAGCTGCTTCTTTCTACCCGGGAGGTGGATGTTGATGTAAGGGA
TCCGAGATATGGCAGGTCACCGCTTTCGTGGGCTGCTGGGGAAGGCCACG
AGGAAGTGGTTGAACTTCTGCTTGCTACGGGAAAGGTAGATGTTGAATCG
AAAAGCATAAGGGGTCGTACTCCCCTTTCTTGGGCGGCGTGGGAGGGTCA
TGACATAGTGGTAAAACTCCTGCTCGCTACTGGTGAGGTGGTTGTCAACA
GCAGAGATTCGGAGGGTCGTACGCCGCTGTCTTGGGCAGCGGAGAATGGC
AACGAGGCTGTGATAAAGCTCCTCATTGCTACGGGAAATGCAGATGTTAG
CGCCAGGGATGTAAATGGGCGCACACCTCAGGATTGGGCGGCAGAGTATG
ATCACCAGAGTGTGGTGAAAATTTTTCGGATGTGCTAGATGACAGCCTCC
ATTGAAATACTGCAGTCCGATTATGATTTGAAATTTCAACCAGTGGATTC
GTCCCTCCATGAGCGACTATCTGACTTTCTTAAGACCAGGGCGAATCTGG
TGGAGGAGAAGAAGTGGATGATACACCTAGGAACCCATACCATCATCGTC
CGGGACCAACTTACCAAGGCGTTCCAAAACATCCTGGCAGTGAAAGATAT
TGTGACTACTGCGGCAAATGCAAGTCTCCCAGCCTCACTTGCCTGTGCTG
GAATAATGGCCTGCTTTACGACGGTCATCCAAGCAGCAGAGCAGCATTCC
CATCTCCTGCAAGGATTAGAATCTATTTCTGAGTTAATTTGCCGATTGCA
TGTAATGGAGCGCCTTTATCTGCACTCGGACACAAAACAGAACATTGGCC
TCCTTGATGACCTTCGGAAAACTATGATTTCATTTTACTCAAAGATACTG
GAATTCCAGGCCCGAGCGCTCTGCTATTTACACAGACCTCGAGCATACCA
ATTCTGGAGAGATGTCCTTAACCGCGACGGCTGGGCTAACCTGCTGCAAG
AATTTGAGAGATACCAGATCACACTAGGTCGAACTACTTCCGTTATTGCA
GATGCAGGATCAATGCAAAGATACGAAGAGCTTCAGGACAAGTACAAAAG
AATATTGGAGGCCTTACACAATCGCAACATATGGACAGCTACATCCGATC
GAGATGAGAAGGTGAAACGATTCCTCAACCTGCTCTACACCTGTCCCTAT
AAGGACCGAAAAGACCGAAACAGCAAGCGTGTCCTTGGAACCTGTGAATG
GTTCATAGGGCATGAGAAATTCCATGCCTGGCAAGGGAGTTCAGGAAATG
GCCTCTCAAGTCTACTATGGGTGTCGGCTGATCCAGGATGTGGCAAGTCA
GTCTTAACTCGATATCTGGTGGATGAGGTTCTTGTCAGCAATGATAAGCG
AACAGTCTGCTATTTCTTCTTTAAAGATGACTTTACCGACCAGAAGAGCG
CAACAAGCGCGCTTTCAGTCATATTAAGGCAGCTATTCATAGCGCAGCCT
CACCTTTTGCACGACGCAATACTGGATAAAGCGGACACTGACAGTAGCAA
GCTTACTCAGTCATTCTCAGAGCTGTGGAGTATACTCATGTCTGTTTCGA
CCGATCCAAAGGCGGCAGAAATATATTGTCTCCTTGATGCCTTAGACGAA
TGCCATGACGAGGACCGGAGCCGGCTCATCAACGCTGTCAACGACTTTTA
TGCAAACACCCACAAGAATAGCAAACTGAAGTTCTTGATTACAAGTAGAC
CATATGAGCATATACGGCGTGGATTCTCCCCTCTTATCACAGAATCACCC
ACCATCCACTTAAGTGGTGACGACGGGGAAGAGGCTGAGCAGATATCTCA
TGAAATAAATCTTGTCATCCGAAAAAGAGTGCAGGACATCAGCAAGCAAA
GATCGCTGATGAAGGAGGAATGCACAATGCTCATAGACAGGCTTACTGCG
GTTCAAAATCGAACTTATCTGTGGGTGAGTCTGATATTAGATGTCCTCGA
GAATACCCCGGAGTTCTCAAAAGGTAAAGTCCATCGGATACTGAGTGACC
TACCCACCACCGTTGACTGTGCCTATGAGAGAATCTTGGATCGAAGTCCA
GATAAGGAAAAGGCTAAGATAACTCTCCATATTATTACGGCAGCTATGCG
ACCTCTTTCCTTGGAAGAACTATCTCTGGCCCTAGCACTCAGCGCAGGCT
ATCAAGCCCCAACAGATATAGTTGATAACATGGAGCCAACGCATCGCTTC
AAAAAGACCCTAAGAGACCTTTGCGGGCTCTTTGTGATCATTCTGGATGA
CAAGGTCTATCTTCTGCATCAGACGGCGAAAGAGTTTTTGGTTCGGGACA
ACAACTCTATCCTGGACAAAACCCTCTCCCAACCCACAACAGGGTGGAAG
TATTCACTCCTTCCAGGTGAATCGAACCGGATCCTTGCGGGAATATGCAT
TTCCTGTATATCTCTTGATCCAGAAAACTTTCCTCAGAAATGTATGCTAG
AGTACTCATCATCTTACTGGGACACTCATTTCCGTCAAGCTTGCATTCCA
GACGAAGACCCGCTAATAGACCGCGCGAAGTTACTTTGCGAACCATGGTC
GGATATATTTCAAACATGGTCGAGGATTTATGCTGTCAAAACAGATAATA
TTCCTGACAGCACTTCATCACTTTTGATTGCATCATCCATGGGGCTTATC
GGCGTGGTTAAGTCCATTCTTCCTACAGGAAAAGCAAACCTTAACTCAAA
GGATTCGGATTACGATCAGACACCATTATCATGGGCAGCGGAACGTGGCC
ACGTGGCAGTTGTGAAGCTTCTGCTTGCCGCAGAGGAAGTGGACATCGAC
TCGAGGAACTCAATTGGCCGAAGCCCACTGTCATTAGCAGCTCAGAATGG
TCACGACGAAGTGGTGAAGCTCCTAATCCGTGAAGATGTGGACATCGATT
CGAAGGATGTGCCTGGCAGTACGCCGCTAGCACTGGCAGCTGAGAATGGC
CACGAGAGAATAGTTCGCCTTCTACTTGCTACAGGAAAGGCCGACATCGA
CTCCAGAGATTCATCTGGAAATAGTCCCCTGTCGTTGGCAGCACAGTTTG
GCCACGAGGCAGTGGTAAAAATCGTCCTTGCTACTGGAGAGGTTGATGTC
AATAACAAGGATTCAAGGGGCAAGACCCCAATATCCTGGGCAGCAAGGGA
AGGCTACGAAGCAGTAGTAAGGCGCCTTCTCGATACAGGAAAGGTAGAAG
TTGACTGCAAGGACTCCGATAACGGTACTCCTCTGCTTTTGGCAGCAATA
GAAGGTTGTGAGGGAATTGTGAAGCGATTGCTTGCTACTGGACAGGTTGA
TGTTAACATAAGAGATCGAAGATATGGTAGGGAGCCGCTTTCCTGGGCTG
CTGGGGAAGGCCACGAGGCAGTGGTTAAGCTGCTTCTTTCTACCCGGGAG
GTGGATGTTGATGTAAGGGATCCGAGATATGGCAGGTCACCGCTTTCGTG
GGCTGCTGGGGAAGGCCACGAGGAAGTGGTTGAACTTCTGCTTGCTACGG
GAAAGGTAGATGTTGAATCGAAAAGCATAAGGGGTCGTACTCCCCTTTCT
TGGGCGGCGTGGGAGGGTCATGACATAGTGGTAAAACTCCTGCTCGCTAC
TGGTGAGGTGGTTGTCAACAGCAGAGATTCGGAGGGTCGTACGCCGCTGT
CTTGGGCAGCGGAGAATGGCAACGAGGCTGTGATAAAGCTCCTCATTGCT
ACGGGAAATGCAGATGTTAGCGCCAGGGATGTAAATGGGCGCACACCTCA
GGATTGGGCGGCAGAGTATGATCACCAGAGTGTGGTGAAAATTTTTCGGA
TGTGCTAGATGACAGCCTCCATTGAAATACTGCAGTCCGATTATGATTTG
AAATTTCAACCAGTGGATTCGTCCCTCCATGAGCGACTATCTGACTTTCT
TAAGACCAGGGCGAATCTGGTGGAGGAGAAGAAGTGGATGATACACCTAG
GAACCCATACCATCATCGTCCGGGACCAACTTACCAAGGCGTTCCAAAAC
ATCCTGGCAGTGAAAGATATTGTGACTACTGCGGCAAATGCAAGTCTCCC
AGCCTCACTTGCCTGTGCTGGAATAATGGCCTGCTTTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR031359 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF17100 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1402918..1406397 - |
|
