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CBS51388_007924-T1, CBS51388_007924-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007924-T1
Unique NameCBS51388_007924-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1583331..1585541+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007924-T1 ID=CBS51388_007924-T1|Name=CBS51388_007924-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2211bp|location=Sequence derived from alignment at An12:1583331..1585541+ (Aspergillus niger CBS 513.88)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACCGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGCTTTCGACGACAGACAGT
GAGGACTGCACCATCTGCATCATCAACGTCACCACCGCCAACGTTACAGC
CATCATCGCAGGTTCCTGAAGCTATCCTGACTGCATCGTCAACCCGGTCA
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGAGCGAAGAAAACCGTCCAAACTCCACTTTCGCAGCAGACCGGCCGG
AGATCATTTCAAATATGGAACAACCAGTCAGCGATCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGATAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTCGAAGAATTCCTCGGCCAGGTGG
GGCACCGAAGTTTGTGCAATCCGAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCTTTAACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCGGATCTCCA
TGATGCGAGCCAACGCGCCTTAACTAGTGATTCGCTGACTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACTTCCGCATGACGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTGCGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAATCTGTTTCGTCGCAATGACTTTCTGCGAGCCTGCGCTGATCTT
TAAGGCCGGGTTTAGCTCTCGTGCACAAGCACGTAAGGTCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAATCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAGATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTCTATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGATTATGGTGGACATTAGTTATCCGTGATACCCATTG
TTCCGCCCTTCTTGGTCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCAACGTGCACACATGCCGATCA
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAGGCCACAAAGCTATCCCTTATTCTTCGAGAAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACTACTAATCACATCCACGAGCAATTG
GACCGCTGGAAAGCACAGCTCCCCCCTCTCATGCAGTGCCACAGGGGCCA
ATTCTCTACGTCAATCTTTGCTCTGCAACTCGACATCCTGCTAAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCGAAACCTATTGAC
TCGTCACTCCCAACCCCAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGGACGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAAATGCTCCTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGCCGCCGACGCAGCCGACGCAGCAGAAGCCACAAGGGC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACTA
ACACTACTCCATATACACAACCTTCCCATCCAATGAACTCCGACATGGAA
AGTTCAATCTGGTCAGACATCCCCAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCCAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Coding sequence (CDS) from alignment at An12:1583331..1585541+

>CBS51388_007924-T1 ID=CBS51388_007924-T1|Name=CBS51388_007924-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2211bp|location=Sequence derived from alignment at An12:1583331..1585541+ (Aspergillus niger CBS 513.88)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACCGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGCTTTCGACGACAGACAGT
GAGGACTGCACCATCTGCATCATCAACGTCACCACCGCCAACGTTACAGC
CATCATCGCAGGTTCCTGAAGCTATCCTGACTGCATCGTCAACCCGGTCA
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGAGCGAAGAAAACCGTCCAAACTCCACTTTCGCAGCAGACCGGCCGG
AGATCATTTCAAATATGGAACAACCAGTCAGCGATCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGATAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTCGAAGAATTCCTCGGCCAGGTGG
GGCACCGAAGTTTGTGCAATCCGAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCTTTAACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCGGATCTCCA
TGATGCGAGCCAACGCGCCTTAACTAGTGATTCGCTGACTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACTTCCGCATGACGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTGCGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAATCTGTTTCGTCGCAATGACTTTCTGCGAGCCTGCGCTGATCTT
TAAGGCCGGGTTTAGCTCTCGTGCACAAGCACGTAAGGTCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAATCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAGATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTCTATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGATTATGGTGGACATTAGTTATCCGTGATACCCATTG
TTCCGCCCTTCTTGGTCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCAACGTGCACACATGCCGATCA
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAGGCCACAAAGCTATCCCTTATTCTTCGAGAAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACTACTAATCACATCCACGAGCAATTG
GACCGCTGGAAAGCACAGCTCCCCCCTCTCATGCAGTGCCACAGGGGCCA
ATTCTCTACGTCAATCTTTGCTCTGCAACTCGACATCCTGCTAAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCGAAACCTATTGAC
TCGTCACTCCCAACCCCAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGGACGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAAATGCTCCTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGCCGCCGACGCAGCCGACGCAGCAGAAGCCACAAGGGC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACTA
ACACTACTCCATATACACAACCTTCCCATCCAATGAACTCCGACATGGAA
AGTTCAATCTGGTCAGACATCCCCAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCCAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007924CBS51388_007924Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007924-T1.exon1CBS51388_007924-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007924-T1.cdsCBS51388_007924-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007924-T1CBS51388_007924-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1583331..1585541 +
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