|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1589467..1591106+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007927-T1 ID=CBS51388_007927-T1|Name=CBS51388_007927-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1640bp|location=Sequence derived from alignment at An12:1589467..1591106+ (Aspergillus niger CBS 513.88)
ATGGAGGGATTTCGCCGGCGGTTCGAGTCTGCACTCCGTCTACGTCGCGA
CTATGATATGCCGAATCATATATCCACAACGATTCGAGATTATATCGCGA
ATGATCTTAAAGAAACTGTCCCACTTTGCGAGGATGAAATGCCCAAAGAC
TCTGTATCGCCTAATGATCTCATGATTATTCTAACACACCTCTGGTGCCG
TGATTTCAAAGAGTACCGCGGGAAATACCCTGACAGGTCGCGAGTCCAGC
TTAGCGCCTCTTTGCTGTTATACTGTTTTACGTCAGCGAGGACTGGGGAG
GTGCATGAATCTACAGCTCGTCGAGAACTGTCACGGAAGAAGACGAGCTT
GAGTACCAGTCATGGCGGTGATGATGGTGATCTTGAAGCTCGTGTTCTAG
CAGCATGTTATAAGGTATCTCTTCCTCAGCAGAACTTTGTCTAATAGGCT
GACTCCCGAATAGCACTTTATACTTACTATTGAGTGGGTGGACGGTATCA
AGATGCTCGTCCTCACATATTCCCGTGTCTATGTAAAAGGCTACTGGAAG
AAAAAGAGATGGCAGCTCCCAATTCATGGGTTCTATGAAATATATAAAAC
GGAGGCTCCTCTTTTTTTCAATCTCTTGACGTTCTTTCTCCCCATGGCAT
GCGCAGATCGCGTCTTCATGGACTATACGTCTGTTGGTGAGATCATGGAT
GCAGCTGAAAACATGCAGGGTGACAATGATGAGAAAATAATTGCTAAACT
CGAACTCAGACCAGAGATGGAAAACATTCCCATCTTTCGGCCATACGATG
AGCAGGCAGTTGAGGATTCTACTGGTCGGTCTCGCGGAGCGGATTCTTTT
GGTAAAGAACTTGCAGAACTTGGACATCGTGCAGGCTATACAGAAAATAT
TACAGGGCGTGCCTGCCGCCGATGGGCACTGATGGAAGCTGGTAAGTAAT
CTATATGTATTCTCCATCCCTCACTAATGTTGAGCTTACACAGATAAAAG
CCACTCTGAAACTGCAAGAATGAAGTTTGCAGGGCATGTCAATAAGGGTA
CTTTCGGCAGATCATATGCACACCCACTCTCTGAAGTAGATGGACCGGCC
ACCTACCTTGGCATTCCCGGCCGTCATGAGCATATACAAAACCGGCGCAG
CATGGGAATTCACAGGCACCCACAACTTTGGCAGTCGCTCCCCGCCAAGG
CAGAGTTCGAGTTTCAGGAGCGACCGGATATCATTGAACTTGATCGACAG
ATGCAATGTCTCACTGACGAGCTGAGCAAGCTTCAGGATCCTATTAGCAA
GAAGAAAGTGCAGCTAGGGCAACATCGAATATACAACGAAAAGCAGAGGC
TTTATATACAAGAACTCCGAACCTTACAGCGAACACAGAGGAGAACGTTG
GTTATACAGCCGACTGCTACATATGAACAGACACTTTTTAATTACACACG
AAAGGTGATGCCAGAGCGCGATTTACTCGCTCAGCTTCTTCCCAGGAACG
ACTCCCTGCGAAGCCCCACAGGGAGAGCAGCTCTGGAAGCCCTTGAGGCT
ATATGTGCAGGTCGCAGTGCGAGTACCTACGGTGCAGGAATGCAATCTGT
GAATGGGGAGTGTCTTTGTGGACGCTTGCTTACAGCGTAA back to topCoding sequence (CDS) from alignment at An12:1589467..1591106+ >CBS51388_007927-T1 ID=CBS51388_007927-T1|Name=CBS51388_007927-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4617bp|location=Sequence derived from alignment at An12:1589467..1591106+ (Aspergillus niger CBS 513.88)
ATGGAGGGATTTCGCCGGCGGTTCGAGTCTGCACTCCGTCTACGTCGCGA
CTATGATATGCCGAATCATATATCCACAACGATTCGAGATTATATCGCGA
ATGATCTTAAAGAAACTGTCCCACTTTGCGAGGATGAAATGCCCAAAGAC
TCTGTATCGCCTAATGATCTCATGATTATTCTAACACACCTCTGGTGCCG
TGATTTCAAAGAGTACCGCGGGAAATACCCTGACAGGTCGCGAGTCCAGC
TTAGCGCCTCTTTGCTGTTATACTGTTTTACGTCAGCGAGGACTGGGGAG
GTGCATGAATCTACAGCTCGTCGAGAACTGTCACGGAAGAAGACGAGCTT
GAGTACCAGTCATGGCGGTGATGATGGTGATCTTGAAGCTCGTGTTCTAG
CAGCATGTTATAAGCACTTTATACTTACTATTGAGTGGGTGGACGGTATC
AAGATGCTCGTCCTCACATATTCCCGTGTCTATGTAAAAGGCTACTGGAA
GAAAAAGAGATGGCAGCTCCCAATTCATGGGTTCTATGAAATATATAAAA
CGGAGGCTCCTCTTTTTTTCAATCTCTTGACGTTCTTTCTCCCCATGGCA
TGCGCAGATCGCGTCTTCATGGACTATACGTCTGTTGGTGAGATCATGGA
TGCAGCTGAAAACATGCAGGGTGACAATGATGAGAAAATAATTGCTAAAC
TCGAACTCAGACCAGAGATGGAAAACATTCCCATCTTTCGGCCATACGAT
GAGCAGGCAGTTGAGGATTCTACTGGTCGGTCTCGCGGAGCGGATTCTTT
TGGTAAAGAACTTGCAGAACTTGGACATCGTGCAGGCTATACAGAAAATA
TTACAGGGCGTGCCTGCCGCCGATGGGCACTGATGGAAGCTGATAAAAGC
CACTCTGAAACTGCAAGAATGAAGTTTGCAGGGCATGTCAATAAGGGTAC
TTTCGGCAGATCATATGCACACCCACTCTCTGAAGTAGATGGACCGGCCA
CCTACCTTGGCATTCCCGGCCGTCATGAGCATATACAAAACCGGCGCAGC
ATGGGAATTCACAGGCACCCACAACTTTGGCAGTCGCTCCCCGCCAAGGC
AGAGTTCGAGTTTCAGGAGCGACCGGATATCATTGAACTTGATCGACAGA
TGCAATGTCTCACTGACGAGCTGAGCAAGCTTCAGGATCCTATTAGCAAG
AAGAAAGTGCAGCTAGGGCAACATCGAATATACAACGAAAAGCAGAGGCT
TTATATACAAGAACTCCGAACCTTACAGCGAACACAGAGGAGAACGTTGG
TTATACAGCCGACTGCTACATATGAACAGACACTTTTTAATTACACACGA
AAGGTGATGCCAGAGCGCGATTTACTCGCTCAGCTTCTTCCCAGGAACGA
CTCCCTGCGAAGCCCCACAGGGAGAGCAGCTCTGGAAGCCCTTGAGGCTA
TATGTGCAGGTCGCAGTGCGAGTACCTACGGTGCAGGAATGCAATCTGTG
AATGGGGAGTGTCTTTGTGGACGCTTGCTTACAGCGTAAATGGAGGGATT
TCGCCGGCGGTTCGAGTCTGCACTCCGTCTACGTCGCGACTATGATATGC
CGAATCATATATCCACAACGATTCGAGATTATATCGCGAATGATCTTAAA
GAAACTGTCCCACTTTGCGAGGATGAAATGCCCAAAGACTCTGTATCGCC
TAATGATCTCATGATTATTCTAACACACCTCTGGTGCCGTGATTTCAAAG
AGTACCGCGGGAAATACCCTGACAGGTCGCGAGTCCAGCTTAGCGCCTCT
TTGCTGTTATACTGTTTTACGTCAGCGAGGACTGGGGAGGTGCATGAATC
TACAGCTCGTCGAGAACTGTCACGGAAGAAGACGAGCTTGAGTACCAGTC
ATGGCGGTGATGATGGTGATCTTGAAGCTCGTGTTCTAGCAGCATGTTAT
AAGCACTTTATACTTACTATTGAGTGGGTGGACGGTATCAAGATGCTCGT
CCTCACATATTCCCGTGTCTATGTAAAAGGCTACTGGAAGAAAAAGAGAT
GGCAGCTCCCAATTCATGGGTTCTATGAAATATATAAAACGGAGGCTCCT
CTTTTTTTCAATCTCTTGACGTTCTTTCTCCCCATGGCATGCGCAGATCG
CGTCTTCATGGACTATACGTCTGTTGGTGAGATCATGGATGCAGCTGAAA
ACATGCAGGGTGACAATGATGAGAAAATAATTGCTAAACTCGAACTCAGA
CCAGAGATGGAAAACATTCCCATCTTTCGGCCATACGATGAGCAGGCAGT
TGAGGATTCTACTGGTCGGTCTCGCGGAGCGGATTCTTTTGGTAAAGAAC
TTGCAGAACTTGGACATCGTGCAGGCTATACAGAAAATATTACAGGGCGT
GCCTGCCGCCGATGGGCACTGATGGAAGCTGATAAAAGCCACTCTGAAAC
TGCAAGAATGAAGTTTGCAGGGCATGTCAATAAGGGTACTTTCGGCAGAT
CATATGCACACCCACTCTCTGAAGTAGATGGACCGGCCACCTACCTTGGC
ATTCCCGGCCGTCATGAGCATATACAAAACCGGCGCAGCATGGGAATTCA
CAGGCACCCACAACTTTGGCAGTCGCTCCCCGCCAAGGCAGAGTTCGAGT
TTCAGGAGCGACCGGATATCATTGAACTTGATCGACAGATGCAATGTCTC
ACTGACGAGCTGAGCAAGCTTCAGGATCCTATTAGCAAGAAGAAAGTGCA
GCTAGGGCAACATCGAATATACAACGAAAAGCAGAGGCTTTATATACAAG
AACTCCGAACCTTACAGCGAACACAGAGGAGAACGTTGGTTATACAGCCG
ACTGCTACATATGAACAGACACTTTTTAATTACACACGAAAGGTGATGCC
AGAGCGCGATTTACTCGCTCAGCTTCTTCCCAGGAACGACTCCCTGCGAA
GCCCCACAGGGAGAGCAGCTCTGGAAGCCCTTGAGGCTATATGTGCAGGT
CGCAGTGCGAGTACCTACGGTGCAGGAATGCAATCTGTGAATGGGGAGTG
TCTTTGTGGACGCTTGCTTACAGCGTAAATGGAGGGATTTCGCCGGCGGT
TCGAGTCTGCACTCCGTCTACGTCGCGACTATGATATGCCGAATCATATA
TCCACAACGATTCGAGATTATATCGCGAATGATCTTAAAGAAACTGTCCC
ACTTTGCGAGGATGAAATGCCCAAAGACTCTGTATCGCCTAATGATCTCA
TGATTATTCTAACACACCTCTGGTGCCGTGATTTCAAAGAGTACCGCGGG
AAATACCCTGACAGGTCGCGAGTCCAGCTTAGCGCCTCTTTGCTGTTATA
CTGTTTTACGTCAGCGAGGACTGGGGAGGTGCATGAATCTACAGCTCGTC
GAGAACTGTCACGGAAGAAGACGAGCTTGAGTACCAGTCATGGCGGTGAT
GATGGTGATCTTGAAGCTCGTGTTCTAGCAGCATGTTATAAGCACTTTAT
ACTTACTATTGAGTGGGTGGACGGTATCAAGATGCTCGTCCTCACATATT
CCCGTGTCTATGTAAAAGGCTACTGGAAGAAAAAGAGATGGCAGCTCCCA
ATTCATGGGTTCTATGAAATATATAAAACGGAGGCTCCTCTTTTTTTCAA
TCTCTTGACGTTCTTTCTCCCCATGGCATGCGCAGATCGCGTCTTCATGG
ACTATACGTCTGTTGGTGAGATCATGGATGCAGCTGAAAACATGCAGGGT
GACAATGATGAGAAAATAATTGCTAAACTCGAACTCAGACCAGAGATGGA
AAACATTCCCATCTTTCGGCCATACGATGAGCAGGCAGTTGAGGATTCTA
CTGGTCGGTCTCGCGGAGCGGATTCTTTTGGTAAAGAACTTGCAGAACTT
GGACATCGTGCAGGCTATACAGAAAATATTACAGGGCGTGCCTGCCGCCG
ATGGGCACTGATGGAAGCTGATAAAAGCCACTCTGAAACTGCAAGAATGA
AGTTTGCAGGGCATGTCAATAAGGGTACTTTCGGCAGATCATATGCACAC
CCACTCTCTGAAGTAGATGGACCGGCCACCTACCTTGGCATTCCCGGCCG
TCATGAGCATATACAAAACCGGCGCAGCATGGGAATTCACAGGCACCCAC
AACTTTGGCAGTCGCTCCCCGCCAAGGCAGAGTTCGAGTTTCAGGAGCGA
CCGGATATCATTGAACTTGATCGACAGATGCAATGTCTCACTGACGAGCT
GAGCAAGCTTCAGGATCCTATTAGCAAGAAGAAAGTGCAGCTAGGGCAAC
ATCGAATATACAACGAAAAGCAGAGGCTTTATATACAAGAACTCCGAACC
TTACAGCGAACACAGAGGAGAACGTTGGTTATACAGCCGACTGCTACATA
TGAACAGACACTTTTTAATTACACACGAAAGGTGATGCCAGAGCGCGATT
TACTCGCTCAGCTTCTTCCCAGGAACGACTCCCTGCGAAGCCCCACAGGG
AGAGCAGCTCTGGAAGCCCTTGAGGCTATATGTGCAGGTCGCAGTGCGAG
TACCTACGGTGCAGGAATGCAATCTGTGAATGGGGAGTGTCTTTGTGGAC
GCTTGCTTACAGCGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021842 |
| DBxref | PFAM:PF11917 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1589467..1591106 + |
|
