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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1624047..1625828+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007936-T1 ID=CBS51388_007936-T1|Name=CBS51388_007936-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1782bp|location=Sequence derived from alignment at An12:1624047..1625828+ (Aspergillus niger CBS 513.88)
ATGGACGGTATTAGCAATGCCGCCTCCCTGGTCGCACTCCTTCAACTAGC
AGGCGCTGTTATCAACTACCTGAGCACGGTCATCGATGCACCCGCTCAGA
AAAGAAAGCTACTTGCTGCGCTTATTCAGGCTCGAGGCCTGCTCTCCACC
CTAGTCGAACTCACGAACGAGGTTCAAGATGAAGATTGGTCACATACTAT
TCAAAGCTTATCCGCCCACAATGGCCCATTGCCCACATTCCAGGAGCTTC
TTGAGCACATGGCCAGGAAGCTAGGCATAACACATTCCGGCGCCAGAACC
AAAACTGTTCTTGATCAGCTTCGGTGGCCGTTCGATCAGACTGGTTTCCA
AGAGATGATCACTTCGCTTGAAAAGCTAAAGTCGCATTTCCTTTTAGCTA
TGGCGAATGACCATATTCGGCTTTCCAAGGCCATCCGAAGTGAGCTTCAC
GAACTTCAGAACCAGTTGACTGAAGCTACTTTTCGTACCCAAAGGCAAAC
CATAATGTCGCTTTCTAAAGAGCAAGAGCTCATTGTGAAGTCTTTGTCTT
TGGGAGGATTGTTTCACGAGTTGAATGGAGACGAAGTCATGGAGAGGAGG
GCCGGTGCTGAGTGGTTTCTACGCCAAAATGCCTTCAAAAAATGGCATGG
TACGAGTCATACTCCAAGCACCTTAGTGCTCACAGGCTCTCCGGGATCAG
GCAAATCATCAATTTGCGAAGTGACCCGGTTCTTCCTCAAAGCCTGGCAT
CAGTCAGAAATTGACACTTGCGTCGCATACTTCGCCTTTAACTTCTCACA
GCGAGAGAAGCTCAGCGAGGCTCTGGTGTTGTCCAACATCGTGCAGCAAA
TATTGTTGGAGCGTCCCTACCTCATGGAACACATTGCCGCTCTAAGGGTC
ACTGGTGGCCCGTTATCCTCAATCGAGAGTATCGATCTAATCCGCCGAGC
TCGGCGTGACCTCAAATACTTCTATGTTATACTGGATGGACTGGACGAGT
GTGAAGGGACGAGTCGAAACGTTGTCGAATCTCTTCTACAAATCAAACCG
CCCGTGAATATCTTGGCAGCAGGGCGAGGAACAAGTGCAGCCTTCGGGAG
CCTGCAAGACAGTGTTATAGTCCACGCTGACGATGCCATGACTTTATCTG
CCCACTTTGACATGATCAAGAAAATGCTTGAGAAGAACGCTCGCCTAACA
GCATATCTTGATCACAGTCCTGAAACCGTTACCAAGGCAGCCAATCTCAT
TTTCGAGCAGAGTAATGGGAGGTATGAACTTTTCAAAAGCGCTTACAAGT
GGCTTTACCTGACATCCTCTGGTTACTATGATGTGCATCATTGAACATGC
CGATGACTAACCCTTCATAGTTGGATATCCGCGACTACTATGATAGAATC
TCTAGCTCAGTCGGAGACCAGAGCCACTTTTGAACGTTTACTGAACGACG
CACCTTTAAATCTTGTTGAGTTGTACGAGTTAAAGCTCGACGATGTCGTG
CACCAGCCAACGGAATTAGCGGTGTTGGCCAAGAAGGCTCTGGGGATAGT
GCTTGATGCTAATGGTTCTGTTACCGTGAGCAAGTTGATGGGTGCTTTAA
CTACGGAATTAATCGACGTCGCATCCGCGCAGCGTCTTGGAAGGGGCCTC
ACAGAGACGGAGACAACTGAGACCATTTGTTCGAGTTGCAAAGGATTTCT
ATCTGTTGATGAGCCTGGCACGCGATTACACTTTGTCCACCAAAGTGTTA
GAGAATTTTTGGTAGCCCGTGACATTTCTTAG back to topCoding sequence (CDS) from alignment at An12:1624047..1625828+ >CBS51388_007936-T1 ID=CBS51388_007936-T1|Name=CBS51388_007936-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3366bp|location=Sequence derived from alignment at An12:1624047..1625828+ (Aspergillus niger CBS 513.88)
ATGGACGGTATTAGCAATGCCGCCTCCCTGGTCGCACTCCTTCAACTAGC
AGGCGCTGTTATCAACTACCTGAGCACGGTCATCGATGCACCCGCTCAGA
AAAGAAAGCTACTTGCTGCGCTTATTCAGGCTCGAGGCCTGCTCTCCACC
CTAGTCGAACTCACGAACGAGGTTCAAGATGAAGATTGGTCACATACTAT
TCAAAGCTTATCCGCCCACAATGGCCCATTGCCCACATTCCAGGAGCTTC
TTGAGCACATGGCCAGGAAGCTAGGCATAACACATTCCGGCGCCAGAACC
AAAACTGTTCTTGATCAGCTTCGGTGGCCGTTCGATCAGACTGGTTTCCA
AGAGATGATCACTTCGCTTGAAAAGCTAAAGTCGCATTTCCTTTTAGCTA
TGGCGAATGACCATATTCGGCTTTCCAAGGCCATCCGAAGTGAGCTTCAC
GAACTTCAGAACCAGTTGACTGAAGCTACTTTTCGTACCCAAAGGCAAAC
CATAATGTCGCTTTCTAAAGAGCAAGAGCTCATTGTGAAGTCTTTGTCTT
TGGGAGGATTGTTTCACGAGTTGAATGGAGACGAAGTCATGGAGAGGAGG
GCCGGTGCTGAGTGGTTTCTACGCCAAAATGCCTTCAAAAAATGGCATGG
TACGAGTCATACTCCAAGCACCTTAGTGCTCACAGGCTCTCCGGGATCAG
GCAAATCATCAATTTGCGAAGTGACCCGGTTCTTCCTCAAAGCCTGGCAT
CAGTCAGAAATTGACACTTGCGTCGCATACTTCGCCTTTAACTTCTCACA
GCGAGAGAAGCTCAGCGAGGCTCTGGTGTTGTCCAACATCGTGCAGCAAA
TATTGTTGGAGCGTCCCTACCTCATGGAACACATTGCCGCTCTAAGGGTC
ACTGGTGGCCCGTTATCCTCAATCGAGAGTATCGATCTAATCCGCCGAGC
TCGGCGTGACCTCAAATACTTCTATGTTATACTGGATGGACTGGACGAGT
GTGAAGGGACGAGTCGAAACGTTGTCGAATCTCTTCTACAAATCAAACCG
CCCGTGAATATCTTGGCAGCAGGGCGAGGAACAAGTGCAGCCTTCGGGAG
CCTGCAAGACAGTGTTATAGTCCACGCTGACGATGCCATGACTTTATCTG
CCCACTTTGACATGATCAAGAAAATGCTTGAGAAGAACGCTCGCCTAACA
GCATATCTTGATCACAGTCCTGAAACCGTTACCAAGGCAGCCAATCTCAT
TTTCGAGCAGAGTAATGGGAGTTGGATATCCGCGACTACTATGATAGAAT
CTCTAGCTCAGTCGGAGACCAGAGCCACTTTTGAACGTTTACTGAACGAC
GCACCTTTAAATCTTGTTGAGTTGTACGAGTTAAAGCTCGACGATGTCGT
GCACCAGCCAACGGAATTAGCGGTGTTGGCCAAGAAGGCTCTGGGGATAG
TGCTTGATGCTAATGGTTCTGTTACCGTGAGCAAGTTGATGGGTGCTTTA
ACTACGGAATTAATCGACGTCGCATCCGCGCAGCGTCTTGGAAGGGGCCT
CACAGAGACGGAGACAACTGAGACCATTTGTTCGAGTTGCAAAGGATTTC
TATCTGTTGATGAGCCTGGCACGCGATTACACTTTGTCCACCAAAGTGTT
AGAGAATTTTTGGTAGCCCGTGACATTTCTTAGATGGACGGTATTAGCAA
TGCCGCCTCCCTGGTCGCACTCCTTCAACTAGCAGGCGCTGTTATCAACT
ACCTGAGCACGGTCATCGATGCACCCGCTCAGAAAAGAAAGCTACTTGCT
GCGCTTATTCAGGCTCGAGGCCTGCTCTCCACCCTAGTCGAACTCACGAA
CGAGGTTCAAGATGAAGATTGGTCACATACTATTCAAAGCTTATCCGCCC
ACAATGGCCCATTGCCCACATTCCAGGAGCTTCTTGAGCACATGGCCAGG
AAGCTAGGCATAACACATTCCGGCGCCAGAACCAAAACTGTTCTTGATCA
GCTTCGGTGGCCGTTCGATCAGACTGGTTTCCAAGAGATGATCACTTCGC
TTGAAAAGCTAAAGTCGCATTTCCTTTTAGCTATGGCGAATGACCATATT
CGGCTTTCCAAGGCCATCCGAAGTGAGCTTCACGAACTTCAGAACCAGTT
GACTGAAGCTACTTTTCGTACCCAAAGGCAAACCATAATGTCGCTTTCTA
AAGAGCAAGAGCTCATTGTGAAGTCTTTGTCTTTGGGAGGATTGTTTCAC
GAGTTGAATGGAGACGAAGTCATGGAGAGGAGGGCCGGTGCTGAGTGGTT
TCTACGCCAAAATGCCTTCAAAAAATGGCATGGTACGAGTCATACTCCAA
GCACCTTAGTGCTCACAGGCTCTCCGGGATCAGGCAAATCATCAATTTGC
GAAGTGACCCGGTTCTTCCTCAAAGCCTGGCATCAGTCAGAAATTGACAC
TTGCGTCGCATACTTCGCCTTTAACTTCTCACAGCGAGAGAAGCTCAGCG
AGGCTCTGGTGTTGTCCAACATCGTGCAGCAAATATTGTTGGAGCGTCCC
TACCTCATGGAACACATTGCCGCTCTAAGGGTCACTGGTGGCCCGTTATC
CTCAATCGAGAGTATCGATCTAATCCGCCGAGCTCGGCGTGACCTCAAAT
ACTTCTATGTTATACTGGATGGACTGGACGAGTGTGAAGGGACGAGTCGA
AACGTTGTCGAATCTCTTCTACAAATCAAACCGCCCGTGAATATCTTGGC
AGCAGGGCGAGGAACAAGTGCAGCCTTCGGGAGCCTGCAAGACAGTGTTA
TAGTCCACGCTGACGATGCCATGACTTTATCTGCCCACTTTGACATGATC
AAGAAAATGCTTGAGAAGAACGCTCGCCTAACAGCATATCTTGATCACAG
TCCTGAAACCGTTACCAAGGCAGCCAATCTCATTTTCGAGCAGAGTAATG
GGAGTTGGATATCCGCGACTACTATGATAGAATCTCTAGCTCAGTCGGAG
ACCAGAGCCACTTTTGAACGTTTACTGAACGACGCACCTTTAAATCTTGT
TGAGTTGTACGAGTTAAAGCTCGACGATGTCGTGCACCAGCCAACGGAAT
TAGCGGTGTTGGCCAAGAAGGCTCTGGGGATAGTGCTTGATGCTAATGGT
TCTGTTACCGTGAGCAAGTTGATGGGTGCTTTAACTACGGAATTAATCGA
CGTCGCATCCGCGCAGCGTCTTGGAAGGGGCCTCACAGAGACGGAGACAA
CTGAGACCATTTGTTCGAGTTGCAAAGGATTTCTATCTGTTGATGAGCCT
GGCACGCGATTACACTTTGTCCACCAAAGTGTTAGAGAATTTTTGGTAGC
CCGTGACATTTCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1624047..1625828 + |
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