You are here

Home

CBS51388_007945-T1, CBS51388_007945-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007945-T1
Unique NameCBS51388_007945-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1662331..1664372-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007945-T1 ID=CBS51388_007945-T1|Name=CBS51388_007945-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2042bp|location=Sequence derived from alignment at An12:1662331..1664372- (Aspergillus niger CBS 513.88)
ATGGTCGCGTGGTGGTCTCTATTTCTGTACGGCCTTCAGGTCGCGGCACC
TGCTTTGGCTGCAACGCCTGCGGACTGGCGATCGCAATCCATTTATTTCC
TTCTCACGGATCGATTTGCAAGGACGGATGGGTCGACGACTGCGACTTGT
AATACTGCGGATCAGGTGTGTTGTTACCTACTAGCTTTCAGAAAGAGGAA
TGTAAACTGACTTGATATAGAAATACTGTGGTGGAACATGGCAGGGCATC
ATCGACAAGGTAAATTGCCCCTTTATCAAAAAAAAAAGAAGGAAAAGCAG
AAGAAAAATAAAATAAAAAGAACTCTAGTCCTAACCATCACATAGTTGGA
CTATATCCAGGGAATGGGCTTCACAGCCATCTGGATCACCCCCGTTACAG
CCCAGCTGCCCCAGACCACCGCATATGGAGATGCCTACCATGGCTACTGG
CAGCAGGATATGTAAGTCGATTTCTTTAAATATCTACCTGTCATCTTTTA
CATCAATATGAACTAACTTGATGGTTTTAGATACTCTCTGAACGAAAACT
ACGGCACTGCAGATGACTTGAAGGCGCTCTCTTCGGCCCTTCATGAGAGG
GGGATGTATCTTATGGTCGATGTGGTTGCTAACCATATGGTTCGTGGTCC
TTTGCAACTGACTTCGCGGATATGGTTCATTTCAGTACTGACAATGAGTA
ATATCAGGGCTATGATGGAGCGGGTAGCTCAGTCGATTACAGTGTGTTTA
AACCGTTCAGTTCCCAAGACTACTTCCACCCGTTCTGTTTCATTCAAAAC
TATGAAGATCAGACTCAGGTTGAGGATTGCTGGCTAGGAGATAACACTGT
CTCCTTGCCTGATCTCGATACCACCAAGGATGTGGTCAAGAATGAATGGT
ACGACTGGGTGGGATCATTGGTATCGAACTACTCCAGTAAGATATTTCTC
CCTCATTCTACAACTTGGCTGATCGATGATACTTACGAAATCAGTTGACG
GCCTCCGTATCGACACAGTAAAACACGTCCAGAAGGACTTCTGGCCCGGG
TACAACAAAGCCGCAGGCGTGTACTGTATCGGCGAGGTGCTCGACGGTGA
TCCGGCCTACACTTGTCCCTACCAGAACGTCATGGACGGCGTACTGAACT
ATCCCATGTATGGTTCCTCCAACCATGAGCCTTCTTGCAAGTCTCATCTC
CTAACGAAACGGCTAAAACCAGTTACTATCCACTCCTCAACGCCTTCAAG
TCAACCTCCGGCAGCATGGACGACCTCTACAACATGATCAACACCGTCAA
ATCCGACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAACCACG
ACAACCCACGGTTCGCTTCGTAAGTCTTCCCTTTTATTTTCCGTTCCCAA
TTTCCACACAGAACCCCACCTAACAAGAGCAAAGTTACACCAACGACATA
GCCCTCGCCAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAATCCC
CATCATCTACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCCG
CGAACCGCGAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTG
TACAAGTTAATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCAA
AGATACAGGATTCGTGACCTACAAGGTAAGCACAACCTCTAAGCATACCC
TAATGGCCTATCTTCAGAGTATCTGACACAAGAGACTAATCACTGGCAAT
ACAGAACTGGCCCATCTACAAAGACGACACAACGATCGCCATGCGCAAGG
GCACAGATGGGTCGCAGATCGTGACTATCTTGTCCAACAAGGGTGCTTCG
GGTGATTCGTATACCCTCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCA
GCAATTGACGGAGGTCATTGGCTGCACGACCGTGACGGTTGGTTCGGATG
GAAATGTGCCTGTTCCTATGGCAGGTGGGCTACCTAGGGTATTGTATCCG
ACTGAGAAGTTGGCAGGTAGCAAGATCTGTAGTAGCTCGTGA
back to top

Coding sequence (CDS) from alignment at An12:1662331..1664372-

>CBS51388_007945-T1 ID=CBS51388_007945-T1|Name=CBS51388_007945-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=13473bp|location=Sequence derived from alignment at An12:1662331..1664372- (Aspergillus niger CBS 513.88)
AACTGGCCCATCTACAAAGACGACACAACGATCGCCATGCGCAAGGGCAC
AGATGGGTCGCAGATCGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTG
ATTCGTATACCCTCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAA
TTGACGGAGGTCATTGGCTGCACGACCGTGACGGTTGGTTCGGATGGAAA
TGTGCCTGTTCCTATGGCAGGTGGGCTACCTAGGGTATTGTATCCGACTG
AGAAGTTGGCAGGTAGCAAGATCTGTAGTAGCTCGTGATTACACCAACGA
CATAGCCCTCGCCAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAA
TCCCCATCATCTACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGAC
CCCGCGAACCGCGAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGA
GCTGTACAAGTTAATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTA
GCAAAGATACAGGATTCGTGACCTACAAGTTACTATCCACTCCTCAACGC
CTTCAAGTCAACCTCCGGCAGCATGGACGACCTCTACAACATGATCAACA
CCGTCAAATCCGACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAG
AACCACGACAACCCACGGTTCGCTTCTTGACGGCCTCCGTATCGACACAG
TAAAACACGTCCAGAAGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGC
GTGTACTGTATCGGCGAGGTGCTCGACGGTGATCCGGCCTACACTTGTCC
CTACCAGAACGTCATGGACGGCGTACTGAACTATCCCATGGCTATGATGG
AGCGGGTAGCTCAGTCGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAG
ACTACTTCCACCCGTTCTGTTTCATTCAAAACTATGAAGATCAGACTCAG
GTTGAGGATTGCTGGCTAGGAGATAACACTGTCTCCTTGCCTGATCTCGA
TACCACCAAGGATGTGGTCAAGAATGAATGGTACGACTGGGTGGGATCAT
TGGTATCGAACTACTCCAATACTCTCTGAACGAAAACTACGGCACTGCAG
ATGACTTGAAGGCGCTCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTT
ATGGTCGATGTGGTTGCTAACCATATGTTGGACTATATCCAGGGAATGGG
CTTCACAGCCATCTGGATCACCCCCGTTACAGCCCAGCTGCCCCAGACCA
CCGCATATGGAGATGCCTACCATGGCTACTGGCAGCAGGATATAAATACT
GTGGTGGAACATGGCAGGGCATCATCGACAAGATGGTCGCGTGGTGGTCT
CTATTTCTGTACGGCCTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCC
TGCGGACTGGCGATCGCAATCCATTTATTTCCTTCTCACGGATCGATTTG
CAAGGACGGATGGGTCGACGACTGCGACTTGTAATACTGCGGATCAGAAC
TGGCCCATCTACAAAGACGACACAACGATCGCCATGCGCAAGGGCACAGA
TGGGTCGCAGATCGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTGATT
CGTATACCCTCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTG
ACGGAGGTCATTGGCTGCACGACCGTGACGGTTGGTTCGGATGGAAATGT
GCCTGTTCCTATGGCAGGTGGGCTACCTAGGGTATTGTATCCGACTGAGA
AGTTGGCAGGTAGCAAGATCTGTAGTAGCTCGTGATTACACCAACGACAT
AGCCCTCGCCAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAATCC
CCATCATCTACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCC
GCGAACCGCGAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCT
GTACAAGTTAATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCA
AAGATACAGGATTCGTGACCTACAAGTTACTATCCACTCCTCAACGCCTT
CAAGTCAACCTCCGGCAGCATGGACGACCTCTACAACATGATCAACACCG
TCAAATCCGACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAAC
CACGACAACCCACGGTTCGCTTCTTGACGGCCTCCGTATCGACACAGTAA
AACACGTCCAGAAGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTG
TACTGTATCGGCGAGGTGCTCGACGGTGATCCGGCCTACACTTGTCCCTA
CCAGAACGTCATGGACGGCGTACTGAACTATCCCATGGCTATGATGGAGC
GGGTAGCTCAGTCGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACT
ACTTCCACCCGTTCTGTTTCATTCAAAACTATGAAGATCAGACTCAGGTT
GAGGATTGCTGGCTAGGAGATAACACTGTCTCCTTGCCTGATCTCGATAC
CACCAAGGATGTGGTCAAGAATGAATGGTACGACTGGGTGGGATCATTGG
TATCGAACTACTCCAATACTCTCTGAACGAAAACTACGGCACTGCAGATG
ACTTGAAGGCGCTCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTTATG
GTCGATGTGGTTGCTAACCATATGTTGGACTATATCCAGGGAATGGGCTT
CACAGCCATCTGGATCACCCCCGTTACAGCCCAGCTGCCCCAGACCACCG
CATATGGAGATGCCTACCATGGCTACTGGCAGCAGGATATAAATACTGTG
GTGGAACATGGCAGGGCATCATCGACAAGATGGTCGCGTGGTGGTCTCTA
TTTCTGTACGGCCTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGC
GGACTGGCGATCGCAATCCATTTATTTCCTTCTCACGGATCGATTTGCAA
GGACGGATGGGTCGACGACTGCGACTTGTAATACTGCGGATCAGAACTGG
CCCATCTACAAAGACGACACAACGATCGCCATGCGCAAGGGCACAGATGG
GTCGCAGATCGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGT
ATACCCTCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTGACG
GAGGTCATTGGCTGCACGACCGTGACGGTTGGTTCGGATGGAAATGTGCC
TGTTCCTATGGCAGGTGGGCTACCTAGGGTATTGTATCCGACTGAGAAGT
TGGCAGGTAGCAAGATCTGTAGTAGCTCGTGATTACACCAACGACATAGC
CCTCGCCAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAATCCCCA
TCATCTACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCCGCG
AACCGCGAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTA
CAAGTTAATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCAAAG
ATACAGGATTCGTGACCTACAAGTTACTATCCACTCCTCAACGCCTTCAA
GTCAACCTCCGGCAGCATGGACGACCTCTACAACATGATCAACACCGTCA
AATCCGACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAACCAC
GACAACCCACGGTTCGCTTCTTGACGGCCTCCGTATCGACACAGTAAAAC
ACGTCCAGAAGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTAC
TGTATCGGCGAGGTGCTCGACGGTGATCCGGCCTACACTTGTCCCTACCA
GAACGTCATGGACGGCGTACTGAACTATCCCATGGCTATGATGGAGCGGG
TAGCTCAGTCGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACT
TCCACCCGTTCTGTTTCATTCAAAACTATGAAGATCAGACTCAGGTTGAG
GATTGCTGGCTAGGAGATAACACTGTCTCCTTGCCTGATCTCGATACCAC
CAAGGATGTGGTCAAGAATGAATGGTACGACTGGGTGGGATCATTGGTAT
CGAACTACTCCAATACTCTCTGAACGAAAACTACGGCACTGCAGATGACT
TGAAGGCGCTCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTTATGGTC
GATGTGGTTGCTAACCATATGTTGGACTATATCCAGGGAATGGGCTTCAC
AGCCATCTGGATCACCCCCGTTACAGCCCAGCTGCCCCAGACCACCGCAT
ATGGAGATGCCTACCATGGCTACTGGCAGCAGGATATAAATACTGTGGTG
GAACATGGCAGGGCATCATCGACAAGATGGTCGCGTGGTGGTCTCTATTT
CTGTACGGCCTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGA
CTGGCGATCGCAATCCATTTATTTCCTTCTCACGGATCGATTTGCAAGGA
CGGATGGGTCGACGACTGCGACTTGTAATACTGCGGATCAGAACTGGCCC
ATCTACAAAGACGACACAACGATCGCCATGCGCAAGGGCACAGATGGGTC
GCAGATCGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATA
CCCTCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTGACGGAG
GTCATTGGCTGCACGACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGT
TCCTATGGCAGGTGGGCTACCTAGGGTATTGTATCCGACTGAGAAGTTGG
CAGGTAGCAAGATCTGTAGTAGCTCGTGATTACACCAACGACATAGCCCT
CGCCAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAATCCCCATCA
TCTACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCCGCGAAC
CGCGAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTACAA
GTTAATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCAAAGATA
CAGGATTCGTGACCTACAAGTTACTATCCACTCCTCAACGCCTTCAAGTC
AACCTCCGGCAGCATGGACGACCTCTACAACATGATCAACACCGTCAAAT
CCGACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAACCACGAC
AACCCACGGTTCGCTTCTTGACGGCCTCCGTATCGACACAGTAAAACACG
TCCAGAAGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGT
ATCGGCGAGGTGCTCGACGGTGATCCGGCCTACACTTGTCCCTACCAGAA
CGTCATGGACGGCGTACTGAACTATCCCATGGCTATGATGGAGCGGGTAG
CTCAGTCGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCC
ACCCGTTCTGTTTCATTCAAAACTATGAAGATCAGACTCAGGTTGAGGAT
TGCTGGCTAGGAGATAACACTGTCTCCTTGCCTGATCTCGATACCACCAA
GGATGTGGTCAAGAATGAATGGTACGACTGGGTGGGATCATTGGTATCGA
ACTACTCCAATACTCTCTGAACGAAAACTACGGCACTGCAGATGACTTGA
AGGCGCTCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTTATGGTCGAT
GTGGTTGCTAACCATATGTTGGACTATATCCAGGGAATGGGCTTCACAGC
CATCTGGATCACCCCCGTTACAGCCCAGCTGCCCCAGACCACCGCATATG
GAGATGCCTACCATGGCTACTGGCAGCAGGATATAAATACTGTGGTGGAA
CATGGCAGGGCATCATCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTG
TACGGCCTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTG
GCGATCGCAATCCATTTATTTCCTTCTCACGGATCGATTTGCAAGGACGG
ATGGGTCGACGACTGCGACTTGTAATACTGCGGATCAGAACTGGCCCATC
TACAAAGACGACACAACGATCGCCATGCGCAAGGGCACAGATGGGTCGCA
GATCGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATACCC
TCTCCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTGACGGAGGTC
ATTGGCTGCACGACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGTTCC
TATGGCAGGTGGGCTACCTAGGGTATTGTATCCGACTGAGAAGTTGGCAG
GTAGCAAGATCTGTAGTAGCTCGTGATTACACCAACGACATAGCCCTCGC
CAAGAACGTCGCAGCATTCATCATCCTCAACGACGGAATCCCCATCATCT
ACGCCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCCGCGAACCGC
GAAGCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTACAAGTT
AATTGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCAAAGATACAG
GATTCGTGACCTACAAGTTACTATCCACTCCTCAACGCCTTCAAGTCAAC
CTCCGGCAGCATGGACGACCTCTACAACATGATCAACACCGTCAAATCCG
ACTGTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAACCACGACAAC
CCACGGTTCGCTTCTTGACGGCCTCCGTATCGACACAGTAAAACACGTCC
AGAAGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGTATC
GGCGAGGTGCTCGACGGTGATCCGGCCTACACTTGTCCCTACCAGAACGT
CATGGACGGCGTACTGAACTATCCCATGGCTATGATGGAGCGGGTAGCTC
AGTCGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCCACC
CGTTCTGTTTCATTCAAAACTATGAAGATCAGACTCAGGTTGAGGATTGC
TGGCTAGGAGATAACACTGTCTCCTTGCCTGATCTCGATACCACCAAGGA
TGTGGTCAAGAATGAATGGTACGACTGGGTGGGATCATTGGTATCGAACT
ACTCCAATACTCTCTGAACGAAAACTACGGCACTGCAGATGACTTGAAGG
CGCTCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTTATGGTCGATGTG
GTTGCTAACCATATGTTGGACTATATCCAGGGAATGGGCTTCACAGCCAT
CTGGATCACCCCCGTTACAGCCCAGCTGCCCCAGACCACCGCATATGGAG
ATGCCTACCATGGCTACTGGCAGCAGGATATAAATACTGTGGTGGAACAT
GGCAGGGCATCATCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTGTAC
GGCCTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTGGCG
ATCGCAATCCATTTATTTCCTTCTCACGGATCGATTTGCAAGGACGGATG
GGTCGACGACTGCGACTTGTAATACTGCGGATCAGAACTGGCCCATCTAC
AAAGACGACACAACGATCGCCATGCGCAAGGGCACAGATGGGTCGCAGAT
CGTGACTATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATACCCTCT
CCTTGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTGACGGAGGTCATT
GGCTGCACGACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGTTCCTAT
GGCAGGTGGGCTACCTAGGGTATTGTATCCGACTGAGAAGTTGGCAGGTA
GCAAGATCTGTAGTAGCTCGTGATTACACCAACGACATAGCCCTCGCCAA
GAACGTCGCAGCATTCATCATCCTCAACGACGGAATCCCCATCATCTACG
CCGGCCAAGAACAGCACTACGCCGGCGGAAACGACCCCGCGAACCGCGAA
GCAACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTACAAGTTAAT
TGCCTCCGCGAACGCAATCCGGAACTATGCCATTAGCAAAGATACAGGAT
TCGTGACCTACAAGTTACTATCCACTCCTCAACGCCTTCAAGTCAACCTC
CGGCAGCATGGACGACCTCTACAACATGATCAACACCGTCAAATCCGACT
GTCCAGACTCAACACTCCTGGGCACATTCGTCGAGAACCACGACAACCCA
CGGTTCGCTTCTTGACGGCCTCCGTATCGACACAGTAAAACACGTCCAGA
AGGACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGTATCGGC
GAGGTGCTCGACGGTGATCCGGCCTACACTTGTCCCTACCAGAACGTCAT
GGACGGCGTACTGAACTATCCCATGGCTATGATGGAGCGGGTAGCTCAGT
CGATTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCCACCCGT
TCTGTTTCATTCAAAACTATGAAGATCAGACTCAGGTTGAGGATTGCTGG
CTAGGAGATAACACTGTCTCCTTGCCTGATCTCGATACCACCAAGGATGT
GGTCAAGAATGAATGGTACGACTGGGTGGGATCATTGGTATCGAACTACT
CCAATACTCTCTGAACGAAAACTACGGCACTGCAGATGACTTGAAGGCGC
TCTCTTCGGCCCTTCATGAGAGGGGGATGTATCTTATGGTCGATGTGGTT
GCTAACCATATGTTGGACTATATCCAGGGAATGGGCTTCACAGCCATCTG
GATCACCCCCGTTACAGCCCAGCTGCCCCAGACCACCGCATATGGAGATG
CCTACCATGGCTACTGGCAGCAGGATATAAATACTGTGGTGGAACATGGC
AGGGCATCATCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTGTACGGC
CTTCAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTGGCGATC
GCAATCCATTTATTTCCTTCTCACGGATCGATTTGCAAGGACGGATGGGT
CGACGACTGCGACTTGTAATACTGCGGATCAGAACTGGCCCATCTACAAA
GACGACACAACGATCGCCATGCGCAAGGGCACAGATGGGTCGCAGATCGT
GACTATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATACCCTCTCCT
TGAGTGGTGCGGGTTACACAGCCGGCCAGCAATTGACGGAGGTCATTGGC
TGCACGACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGTTCCTATGGC
AGGTGGGCTACCTAGGGTATTGTATCCGACTGAGAAGTTGGCAGGTAGCA
AGATCTGTAGTAGCTCGTGATTACACCAACGACATAGCCCTCGCCAAGAA
CGTCGCAGCATTCATCATCCTCAACGACGGAATCCCCATCATCTACGCCG
GCCAAGAACAGCACTACGCCGGCGGAAACGACCCCGCGAACCGCGAAGCA
ACCTGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTACAAGTTAATTGC
CTCCGCGAACGCAATCCGGAACTATGCCATTAGCAAAGATACAGGATTCG
TGACCTACAAGTTACTATCCACTCCTCAACGCCTTCAAGTCAACCTCCGG
CAGCATGGACGACCTCTACAACATGATCAACACCGTCAAATCCGACTGTC
CAGACTCAACACTCCTGGGCACATTCGTCGAGAACCACGACAACCCACGG
TTCGCTTCTTGACGGCCTCCGTATCGACACAGTAAAACACGTCCAGAAGG
ACTTCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGTATCGGCGAG
GTGCTCGACGGTGATCCGGCCTACACTTGTCCCTACCAGAACGTCATGGA
CGGCGTACTGAACTATCCCATGGCTATGATGGAGCGGGTAGCTCAGTCGA
TTACAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCCACCCGTTCT
GTTTCATTCAAAACTATGAAGATCAGACTCAGGTTGAGGATTGCTGGCTA
GGAGATAACACTGTCTCCTTGCCTGATCTCGATACCACCAAGGATGTGGT
CAAGAATGAATGGTACGACTGGGTGGGATCATTGGTATCGAACTACTCCA
ATACTCTCTGAACGAAAACTACGGCACTGCAGATGACTTGAAGGCGCTCT
CTTCGGCCCTTCATGAGAGGGGGATGTATCTTATGGTCGATGTGGTTGCT
AACCATATGTTGGACTATATCCAGGGAATGGGCTTCACAGCCATCTGGAT
CACCCCCGTTACAGCCCAGCTGCCCCAGACCACCGCATATGGAGATGCCT
ACCATGGCTACTGGCAGCAGGATATAAATACTGTGGTGGAACATGGCAGG
GCATCATCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTGTACGGCCTT
CAGGTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTGGCGATCGCA
ATCCATTTATTTCCTTCTCACGGATCGATTTGCAAGGACGGATGGGTCGA
CGACTGCGACTTGTAATACTGCGGATCAGAACTGGCCCATCTACAAAGAC
GACACAACGATCGCCATGCGCAAGGGCACAGATGGGTCGCAGATCGTGAC
TATCTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATACCCTCTCCTTGA
GTGGTGCGGGTTACACAGCCGGCCAGCAATTGACGGAGGTCATTGGCTGC
ACGACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGTTCCTATGGCAGG
TGGGCTACCTAGGGTATTGTATCCGACTGAGAAGTTGGCAGGTAGCAAGA
TCTGTAGTAGCTCGTGATTACACCAACGACATAGCCCTCGCCAAGAACGT
CGCAGCATTCATCATCCTCAACGACGGAATCCCCATCATCTACGCCGGCC
AAGAACAGCACTACGCCGGCGGAAACGACCCCGCGAACCGCGAAGCAACC
TGGCTCTCGGGCTACCCGACCGACAGCGAGCTGTACAAGTTAATTGCCTC
CGCGAACGCAATCCGGAACTATGCCATTAGCAAAGATACAGGATTCGTGA
CCTACAAGTTACTATCCACTCCTCAACGCCTTCAAGTCAACCTCCGGCAG
CATGGACGACCTCTACAACATGATCAACACCGTCAAATCCGACTGTCCAG
ACTCAACACTCCTGGGCACATTCGTCGAGAACCACGACAACCCACGGTTC
GCTTCTTGACGGCCTCCGTATCGACACAGTAAAACACGTCCAGAAGGACT
TCTGGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGTATCGGCGAGGTG
CTCGACGGTGATCCGGCCTACACTTGTCCCTACCAGAACGTCATGGACGG
CGTACTGAACTATCCCATGGCTATGATGGAGCGGGTAGCTCAGTCGATTA
CAGTGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCCACCCGTTCTGTT
TCATTCAAAACTATGAAGATCAGACTCAGGTTGAGGATTGCTGGCTAGGA
GATAACACTGTCTCCTTGCCTGATCTCGATACCACCAAGGATGTGGTCAA
GAATGAATGGTACGACTGGGTGGGATCATTGGTATCGAACTACTCCAATA
CTCTCTGAACGAAAACTACGGCACTGCAGATGACTTGAAGGCGCTCTCTT
CGGCCCTTCATGAGAGGGGGATGTATCTTATGGTCGATGTGGTTGCTAAC
CATATGTTGGACTATATCCAGGGAATGGGCTTCACAGCCATCTGGATCAC
CCCCGTTACAGCCCAGCTGCCCCAGACCACCGCATATGGAGATGCCTACC
ATGGCTACTGGCAGCAGGATATAAATACTGTGGTGGAACATGGCAGGGCA
TCATCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTGTACGGCCTTCAG
GTCGCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTGGCGATCGCAATC
CATTTATTTCCTTCTCACGGATCGATTTGCAAGGACGGATGGGTCGACGA
CTGCGACTTGTAATACTGCGGATCAGAACTGGCCCATCTACAAAGACGAC
ACAACGATCGCCATGCGCAAGGGCACAGATGGGTCGCAGATCGTGACTAT
CTTGTCCAACAAGGGTGCTTCGGGTGATTCGTATACCCTCTCCTTGAGTG
GTGCGGGTTACACAGCCGGCCAGCAATTGACGGAGGTCATTGGCTGCACG
ACCGTGACGGTTGGTTCGGATGGAAATGTGCCTGTTCCTATGGCAGGTGG
GCTACCTAGGGTATTGTATCCGACTGAGAAGTTGGCAGGTAGCAAGATCT
GTAGTAGCTCGTGATTACACCAACGACATAGCCCTCGCCAAGAACGTCGC
AGCATTCATCATCCTCAACGACGGAATCCCCATCATCTACGCCGGCCAAG
AACAGCACTACGCCGGCGGAAACGACCCCGCGAACCGCGAAGCAACCTGG
CTCTCGGGCTACCCGACCGACAGCGAGCTGTACAAGTTAATTGCCTCCGC
GAACGCAATCCGGAACTATGCCATTAGCAAAGATACAGGATTCGTGACCT
ACAAGTTACTATCCACTCCTCAACGCCTTCAAGTCAACCTCCGGCAGCAT
GGACGACCTCTACAACATGATCAACACCGTCAAATCCGACTGTCCAGACT
CAACACTCCTGGGCACATTCGTCGAGAACCACGACAACCCACGGTTCGCT
TCTTGACGGCCTCCGTATCGACACAGTAAAACACGTCCAGAAGGACTTCT
GGCCCGGGTACAACAAAGCCGCAGGCGTGTACTGTATCGGCGAGGTGCTC
GACGGTGATCCGGCCTACACTTGTCCCTACCAGAACGTCATGGACGGCGT
ACTGAACTATCCCATGGCTATGATGGAGCGGGTAGCTCAGTCGATTACAG
TGTGTTTAAACCGTTCAGTTCCCAAGACTACTTCCACCCGTTCTGTTTCA
TTCAAAACTATGAAGATCAGACTCAGGTTGAGGATTGCTGGCTAGGAGAT
AACACTGTCTCCTTGCCTGATCTCGATACCACCAAGGATGTGGTCAAGAA
TGAATGGTACGACTGGGTGGGATCATTGGTATCGAACTACTCCAATACTC
TCTGAACGAAAACTACGGCACTGCAGATGACTTGAAGGCGCTCTCTTCGG
CCCTTCATGAGAGGGGGATGTATCTTATGGTCGATGTGGTTGCTAACCAT
ATGTTGGACTATATCCAGGGAATGGGCTTCACAGCCATCTGGATCACCCC
CGTTACAGCCCAGCTGCCCCAGACCACCGCATATGGAGATGCCTACCATG
GCTACTGGCAGCAGGATATAAATACTGTGGTGGAACATGGCAGGGCATCA
TCGACAAGATGGTCGCGTGGTGGTCTCTATTTCTGTACGGCCTTCAGGTC
GCGGCACCTGCTTTGGCTGCAACGCCTGCGGACTGGCGATCGCAATCCAT
TTATTTCCTTCTCACGGATCGATTTGCAAGGACGGATGGGTCGACGACTG
CGACTTGTAATACTGCGGATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004556alpha-amylase activity
GO:0005509calcium ion binding
GO:0043169cation binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AMY1_2CBS51388_007945Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007945-T1CBS51388_007945-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007945-T1.cdsCBS51388_007945-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007945-T1.exon9CBS51388_007945-T1.exon9Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon8CBS51388_007945-T1.exon8Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon7CBS51388_007945-T1.exon7Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon6CBS51388_007945-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon5CBS51388_007945-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon4CBS51388_007945-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon3CBS51388_007945-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon2CBS51388_007945-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007945-T1.exon1CBS51388_007945-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_12.5
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH13_17
NoteCAZy:GH13_37
NoteCAZy:GH13_7
NoteCAZy:GH13_15
NoteCAZy:GH13_31
NoteCAZy:GH13_19
NoteCAZy:GH13_36
NoteCAZy:GH13_20
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR006047
DBxrefInterPro:IPR006046
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
ProductAlpha-amylase A type-1/2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1662331..1664372 -
Powered by Drupal