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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1705877..1706944- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007958-T1 ID=CBS51388_007958-T1|Name=CBS51388_007958-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1068bp|location=Sequence derived from alignment at An12:1705877..1706944- (Aspergillus niger CBS 513.88)
ATGGCCAAGTACGCGAAAGACCAGCCCGCCGGCTTCAAGAACTCCATCGA
GCGAGTCGCCATTGTCGGAGTAAGTCAGGCAATTACCAATCCCATACACA
GCAACACTAACACACGCCTCTAGGCCGGAGGTACTGTCGGATTGAACATC
GTCACCGAACTCCTCAAAACCGGCAAACACACTGTCACAGCCCTTACTCG
GGCAGACAGCACCAACAAAATTCCCGAAGGCGTCCAAATTGCCCACATTA
ACTACGATGACGAGGCCACCATCATTTCTGCCCTGAAGGGTCAGCAATTC
CTCATCATCACCATGGCTCCAACAGCTCCCCGGGACACTCACAGCAAGAT
CGTCCAAGCAGCCGCCAAGGCCGGTATCCCCTACGTCATGCCAAACGGGT
ATGGCGGAGACATCGAAAAGGTTAAGTTGGGCGAGGAGACGTTCCTAGGC
CCTGTCAATCGAGCCCACCGGGACGAAATTGCCCGGCTCGGTATGCAGTG
GATCACAGTGTGCTGTGGATTCTGGTACGACTATAGCCTGGCTGGCGGCG
AGTCACGCTTCGGATTCGACTTCGACAAGCGGTCTTTGACCATCTATGAT
GATGGCACCACGAAGAACTCGACGTCCACGTTGTCGCAGATTGGACGGGC
TGTGGCGAAGGTGCTCAGTCTGAAGGAGCTTCCCGAGGATGAAAGTGATA
AGAGTCTTACTCTATCGTCGTTCTTGAACAAGGGAATTTATTTTCAAAGC
TTCCTTGTGAACCAGAAGGAGATGTTTGAGAGCGTGAAGCGTGTTACTGG
TACTACGGACGCCGACTGGACGATTACTCATGAGAGTACTAAGAAGCGGT
ATGAGGAAGGGTTAGCACTGGTCAAGGGTGGTAACATGGCTGGCTTTGCT
AAGATGCTGTACGCAAGAGGGTTTTACCCGGAGGATACAAGCGATCACGC
GTCTAAGGCGCAGAACGAGCTACTTGGGTTGCCAGAGGAGAGCTTGGATG
AGGGCACAAAGGCTGCCATTGATTTGGTCAAGAAGCTGCAGGCTCGCCCT
GAGCGTATGGCGTCCTAG back to topCoding sequence (CDS) from alignment at An12:1705877..1706944- >CBS51388_007958-T1 ID=CBS51388_007958-T1|Name=CBS51388_007958-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2028bp|location=Sequence derived from alignment at An12:1705877..1706944- (Aspergillus niger CBS 513.88)
GCCGGAGGTACTGTCGGATTGAACATCGTCACCGAACTCCTCAAAACCGG
CAAACACACTGTCACAGCCCTTACTCGGGCAGACAGCACCAACAAAATTC
CCGAAGGCGTCCAAATTGCCCACATTAACTACGATGACGAGGCCACCATC
ATTTCTGCCCTGAAGGGTCAGCAATTCCTCATCATCACCATGGCTCCAAC
AGCTCCCCGGGACACTCACAGCAAGATCGTCCAAGCAGCCGCCAAGGCCG
GTATCCCCTACGTCATGCCAAACGGGTATGGCGGAGACATCGAAAAGGTT
AAGTTGGGCGAGGAGACGTTCCTAGGCCCTGTCAATCGAGCCCACCGGGA
CGAAATTGCCCGGCTCGGTATGCAGTGGATCACAGTGTGCTGTGGATTCT
GGTACGACTATAGCCTGGCTGGCGGCGAGTCACGCTTCGGATTCGACTTC
GACAAGCGGTCTTTGACCATCTATGATGATGGCACCACGAAGAACTCGAC
GTCCACGTTGTCGCAGATTGGACGGGCTGTGGCGAAGGTGCTCAGTCTGA
AGGAGCTTCCCGAGGATGAAAGTGATAAGAGTCTTACTCTATCGTCGTTC
TTGAACAAGGGAATTTATTTTCAAAGCTTCCTTGTGAACCAGAAGGAGAT
GTTTGAGAGCGTGAAGCGTGTTACTGGTACTACGGACGCCGACTGGACGA
TTACTCATGAGAGTACTAAGAAGCGGTATGAGGAAGGGTTAGCACTGGTC
AAGGGTGGTAACATGGCTGGCTTTGCTAAGATGCTGTACGCAAGAGGGTT
TTACCCGGAGGATACAAGCGATCACGCGTCTAAGGCGCAGAACGAGCTAC
TTGGGTTGCCAGAGGAGAGCTTGGATGAGGGCACAAAGGCTGCCATTGAT
TTGGTCAAGAAGCTGCAGGCTCGCCCTGAGCGTATGGCGTCCTAGATGGC
CAAGTACGCGAAAGACCAGCCCGCCGGCTTCAAGAACTCCATCGAGCGAG
TCGCCATTGTCGGAGCCGGAGGTACTGTCGGATTGAACATCGTCACCGAA
CTCCTCAAAACCGGCAAACACACTGTCACAGCCCTTACTCGGGCAGACAG
CACCAACAAAATTCCCGAAGGCGTCCAAATTGCCCACATTAACTACGATG
ACGAGGCCACCATCATTTCTGCCCTGAAGGGTCAGCAATTCCTCATCATC
ACCATGGCTCCAACAGCTCCCCGGGACACTCACAGCAAGATCGTCCAAGC
AGCCGCCAAGGCCGGTATCCCCTACGTCATGCCAAACGGGTATGGCGGAG
ACATCGAAAAGGTTAAGTTGGGCGAGGAGACGTTCCTAGGCCCTGTCAAT
CGAGCCCACCGGGACGAAATTGCCCGGCTCGGTATGCAGTGGATCACAGT
GTGCTGTGGATTCTGGTACGACTATAGCCTGGCTGGCGGCGAGTCACGCT
TCGGATTCGACTTCGACAAGCGGTCTTTGACCATCTATGATGATGGCACC
ACGAAGAACTCGACGTCCACGTTGTCGCAGATTGGACGGGCTGTGGCGAA
GGTGCTCAGTCTGAAGGAGCTTCCCGAGGATGAAAGTGATAAGAGTCTTA
CTCTATCGTCGTTCTTGAACAAGGGAATTTATTTTCAAAGCTTCCTTGTG
AACCAGAAGGAGATGTTTGAGAGCGTGAAGCGTGTTACTGGTACTACGGA
CGCCGACTGGACGATTACTCATGAGAGTACTAAGAAGCGGTATGAGGAAG
GGTTAGCACTGGTCAAGGGTGGTAACATGGCTGGCTTTGCTAAGATGCTG
TACGCAAGAGGGTTTTACCCGGAGGATACAAGCGATCACGCGTCTAAGGC
GCAGAACGAGCTACTTGGGTTGCCAGAGGAGAGCTTGGATGAGGGCACAA
AGGCTGCCATTGATTTGGTCAAGAAGCTGCAGGCTCGCCCTGAGCGTATG
GCGTCCTAGATGGCCAAGTACGCGAAAGACCAGCCCGCCGGCTTCAAGAA
CTCCATCGAGCGAGTCGCCATTGTCGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.5 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1705877..1706944 - |
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