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CBS51388_007959-T1, CBS51388_007959-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007959-T1
Unique NameCBS51388_007959-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1707494..1709203-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007959-T1 ID=CBS51388_007959-T1|Name=CBS51388_007959-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1710bp|location=Sequence derived from alignment at An12:1707494..1709203- (Aspergillus niger CBS 513.88)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GACTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
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Coding sequence (CDS) from alignment at An12:1707494..1709203-

>CBS51388_007959-T1 ID=CBS51388_007959-T1|Name=CBS51388_007959-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1710bp|location=Sequence derived from alignment at An12:1707494..1709203- (Aspergillus niger CBS 513.88)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GACTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007959CBS51388_007959Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007959-T1.cdsCBS51388_007959-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007959-T1.exon1CBS51388_007959-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007959-T1CBS51388_007959-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_12.5
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1707494..1709203 -
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