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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1714982..1717169- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007963-T1 ID=CBS51388_007963-T1|Name=CBS51388_007963-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2188bp|location=Sequence derived from alignment at An12:1714982..1717169- (Aspergillus niger CBS 513.88)
ATGGCGGCTGTCGAACTTGTTACGCAAGGGACGGCCTACGGCCTCCTCAT
CGGTCTTGGTGTGTTCTTCTGCGGGGTGATTCTCATCGCAATCAAGGTGC
AGAAGGCGTATCTGTCTGAAGACTCGGGTACGTCAGAGATGTTCATGGTC
GCAAATCGATCGGTCGGTACGGGTTTGACTGCATCTGCTGTGTTCTCCTC
GTGGATGTGGATCAACGAGACGGTGCTATCGGCTGCGATGTGTTATCGCT
ATGGATTGGCAGTTCCACTGGTATGTCAGCAGGCTCTCTTTTAATTTTAT
GACAGATGCTGATTTGACTGTTCGTACAGTGGTGGGGATCGGGTCTTTGT
TTTCAGATCGCCTTGATGGCTGCTCTTGGTGTCATGGCCAAGATCCGGGT
TCCGTATGCCCATACGTCGCTTGAGATCACTCGTATGCGATATGGCTGGA
TCGGACATGTCATCTACATGGTTTTGAATCTGACAAACAACGTTTTTGGT
TGTGCCTCGATGATCTTGACCGGGTCCCAGCTGATAAACGGTGTTTCGGG
CATGAACTTCGTTGCGGCAACCATCCTGATTCCTTTGGGAGGTAAGCTTG
GGTCATCGCATATCACAGGGTATTATACTGACGAACAATGGCAAAGTTGT
TCTTTACACGGCTGTTGGAGGGCTGAAAGCGACGTTTTTGACCGACTTTT
TGCATACCACAGTCGCCTTAATCCTGATCATTTATTTCACACTCTCAGTC
CTTACTCACCCCGAAGTTGGCGGGTTGGCTGGACTATACGACAAGGTGGT
CGCAACAGCGAGCGAGAATTATATCTCCGGTAACTTCGAGGGATCGCTTC
TCACGATGAAATCAAAAGGGGCGATTATTTGGGGCTTAATCTTGAAGTTT
GGTAACTTAGCTCTGGTGGTCATGGTAGGCTCATTCTTCCTTTCCCCCAG
TTATATGGCAGACAATCAGACTCACTCGCATTTAGGACACCGCGTTCTGG
CAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGTGCCGGCATACAACCT
GGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCTTAGGCACTGTTATTG
GCCTGACCGCTCGAGCGCTCCACCACACTCCTCTCTGGCCCACCTATCCT
ATTGATATCACGACAACTGAGGTCAGCAAAGGCATGGTCATGCCCTACCT
GGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCGCCTTCTTTGTTCTCT
TGTTCATGGCACTGACCAGCACGGTCTCCTCGTCAATGATCGCCGTCAGC
AGTATCCTGTCGTTTGATATGTACAAGACGTACATCAACCCCCAAGCCAG
TGACCGCCGGCTCTTGGGAGTTAGCCACATAACTGTCGTATTCCATGCGA
TCTTCATCACTGGCATTTCCATTGCTCTTAACTACGGGGGCGCCAACATG
ACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTGTCCCGGAATCATTCC
TCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCCGCCTGGCGGCTATCC
TATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCGATCTGGCTCGCAACG
GCCAAGTCAATGTATGGGGCCGTGAACATGACCACAACTGGAGAAGAGCT
GCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCTCACCCGCTCTCTACT
CCGTGGTAATTTCTCTATATCGCCCGTACACATTTGACTGGCGAGAGTTC
CTCAGAATCGAACTCGCAGATGAAGCACCGACTAGAGCCACGCCCGCTGC
AACTCAAGAGACTAAGGTTGAAGGGGTCTATATCTCGACGGATGCCAGCC
CGACGTCAACCCCGAGCCGCCTCAGTCTAGATGACGTTCGTCACCCTTTC
ACAGAAGATACCCTGCGAAAGCTGCATCGATGGTCATGGATCGCATGGGC
GATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGCTGTGGCCAATGCCGC
TTTATCGCGACTATATCTTCACCAAATCCTTCTTCTCCGGATGGACCACG
GTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGCTGTTGTGGTCTACCC
ACTGTATGACGGACGGTTCGAAATTGCTAAGGGTGTACAAGGCGTACTGA
CGTCAAGTCGTGAATTCCTCAACCGACACAAAAATTAG back to topCoding sequence (CDS) from alignment at An12:1714982..1717169- >CBS51388_007963-T1 ID=CBS51388_007963-T1|Name=CBS51388_007963-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8052bp|location=Sequence derived from alignment at An12:1714982..1717169- (Aspergillus niger CBS 513.88)
GACACCGCGTTCTGGCAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGT
GCCGGCATACAACCTGGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCT
TAGGCACTGTTATTGGCCTGACCGCTCGAGCGCTCCACCACACTCCTCTC
TGGCCCACCTATCCTATTGATATCACGACAACTGAGGTCAGCAAAGGCAT
GGTCATGCCCTACCTGGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCG
CCTTCTTTGTTCTCTTGTTCATGGCACTGACCAGCACGGTCTCCTCGTCA
ATGATCGCCGTCAGCAGTATCCTGTCGTTTGATATGTACAAGACGTACAT
CAACCCCCAAGCCAGTGACCGCCGGCTCTTGGGAGTTAGCCACATAACTG
TCGTATTCCATGCGATCTTCATCACTGGCATTTCCATTGCTCTTAACTAC
GGGGGCGCCAACATGACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTG
TCCCGGAATCATTCCTCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCC
GCCTGGCGGCTATCCTATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCG
ATCTGGCTCGCAACGGCCAAGTCAATGTATGGGGCCGTGAACATGACCAC
AACTGGAGAAGAGCTGCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCT
CACCCGCTCTCTACTCCGTGGTAATTTCTCTATATCGCCCGTACACATTT
GACTGGCGAGAGTTCCTCAGAATCGAACTCGCAGATGAAGCACCGACTAG
AGCCACGCCCGCTGCAACTCAAGAGACTAAGGTTGAAGGGGTCTATATCT
CGACGGATGCCAGCCCGACGTCAACCCCGAGCCGCCTCAGTCTAGATGAC
GTTCGTCACCCTTTCACAGAAGATACCCTGCGAAAGCTGCATCGATGGTC
ATGGATCGCATGGGCGATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGC
TGTGGCCAATGCCGCTTTATCGCGACTATATCTTCACCAAATCCTTCTTC
TCCGGATGGACCACGGTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGC
TGTTGTGGTCTACCCACTGTATGACGGACGGTTCGAAATTGCTAAGGGTG
TACAAGGCGTACTGACGTCAAGTCGTGAATTCCTCAACCGACACAAAAAT
TAGTTGTTCTTTACACGGCTGTTGGAGGGCTGAAAGCGACGTTTTTGACC
GACTTTTTGCATACCACAGTCGCCTTAATCCTGATCATTTATTTCACACT
CTCAGTCCTTACTCACCCCGAAGTTGGCGGGTTGGCTGGACTATACGACA
AGGTGGTCGCAACAGCGAGCGAGAATTATATCTCCGGTAACTTCGAGGGA
TCGCTTCTCACGATGAAATCAAAAGGGGCGATTATTTGGGGCTTAATCTT
GAAGTTTGGTAACTTAGCTCTGGTGGTCATGTGGTGGGGATCGGGTCTTT
GTTTTCAGATCGCCTTGATGGCTGCTCTTGGTGTCATGGCCAAGATCCGG
GTTCCGTATGCCCATACGTCGCTTGAGATCACTCGTATGCGATATGGCTG
GATCGGACATGTCATCTACATGGTTTTGAATCTGACAAACAACGTTTTTG
GTTGTGCCTCGATGATCTTGACCGGGTCCCAGCTGATAAACGGTGTTTCG
GGCATGAACTTCGTTGCGGCAACCATCCTGATTCCTTTGGGAGATGGCGG
CTGTCGAACTTGTTACGCAAGGGACGGCCTACGGCCTCCTCATCGGTCTT
GGTGTGTTCTTCTGCGGGGTGATTCTCATCGCAATCAAGGTGCAGAAGGC
GTATCTGTCTGAAGACTCGGGTACGTCAGAGATGTTCATGGTCGCAAATC
GATCGGTCGGTACGGGTTTGACTGCATCTGCTGTGTTCTCCTCGTGGATG
TGGATCAACGAGACGGTGCTATCGGCTGCGATGTGTTATCGCTATGGATT
GGCAGTTCCACTGGACACCGCGTTCTGGCAAAAGTCTTTTGCCAGTGAAG
TGAATTCTACCGTGCCGGCATACAACCTGGCCGCAATAGCTGTGTTTGGT
ATCCCCTGGGGCTTAGGCACTGTTATTGGCCTGACCGCTCGAGCGCTCCA
CCACACTCCTCTCTGGCCCACCTATCCTATTGATATCACGACAACTGAGG
TCAGCAAAGGCATGGTCATGCCCTACCTGGTCAAGGCCCTTCTTGGAGAG
TCTGGAATGATCGCCTTCTTTGTTCTCTTGTTCATGGCACTGACCAGCAC
GGTCTCCTCGTCAATGATCGCCGTCAGCAGTATCCTGTCGTTTGATATGT
ACAAGACGTACATCAACCCCCAAGCCAGTGACCGCCGGCTCTTGGGAGTT
AGCCACATAACTGTCGTATTCCATGCGATCTTCATCACTGGCATTTCCAT
TGCTCTTAACTACGGGGGCGCCAACATGACGTGGATCGGTTACTTCCGGC
CTATCCTGTCTTGTCCCGGAATCATTCCTCTCGGGTTGACTCTGTTCTGG
TCCCGTCAGACCCGCCTGGCGGCTATCCTATCGCCGGTGCTTGGCTTCTT
TACTGGTCTTGCGATCTGGCTCGCAACGGCCAAGTCAATGTATGGGGCCG
TGAACATGACCACAACTGGAGAAGAGCTGCCCGCACTCTATGGTGCCATC
GGGTCTTTCTTCTCACCCGCTCTCTACTCCGTGGTAATTTCTCTATATCG
CCCGTACACATTTGACTGGCGAGAGTTCCTCAGAATCGAACTCGCAGATG
AAGCACCGACTAGAGCCACGCCCGCTGCAACTCAAGAGACTAAGGTTGAA
GGGGTCTATATCTCGACGGATGCCAGCCCGACGTCAACCCCGAGCCGCCT
CAGTCTAGATGACGTTCGTCACCCTTTCACAGAAGATACCCTGCGAAAGC
TGCATCGATGGTCATGGATCGCATGGGCGATGTTTGTGGTCTTGGTGCTG
ATTACCTTTGTGCTGTGGCCAATGCCGCTTTATCGCGACTATATCTTCAC
CAAATCCTTCTTCTCCGGATGGACCACGGTCGCGATCATCTGGCAATTCT
GTGCCTTTTTCGCTGTTGTGGTCTACCCACTGTATGACGGACGGTTCGAA
ATTGCTAAGGGTGTACAAGGCGTACTGACGTCAAGTCGTGAATTCCTCAA
CCGACACAAAAATTAGTTGTTCTTTACACGGCTGTTGGAGGGCTGAAAGC
GACGTTTTTGACCGACTTTTTGCATACCACAGTCGCCTTAATCCTGATCA
TTTATTTCACACTCTCAGTCCTTACTCACCCCGAAGTTGGCGGGTTGGCT
GGACTATACGACAAGGTGGTCGCAACAGCGAGCGAGAATTATATCTCCGG
TAACTTCGAGGGATCGCTTCTCACGATGAAATCAAAAGGGGCGATTATTT
GGGGCTTAATCTTGAAGTTTGGTAACTTAGCTCTGGTGGTCATGTGGTGG
GGATCGGGTCTTTGTTTTCAGATCGCCTTGATGGCTGCTCTTGGTGTCAT
GGCCAAGATCCGGGTTCCGTATGCCCATACGTCGCTTGAGATCACTCGTA
TGCGATATGGCTGGATCGGACATGTCATCTACATGGTTTTGAATCTGACA
AACAACGTTTTTGGTTGTGCCTCGATGATCTTGACCGGGTCCCAGCTGAT
AAACGGTGTTTCGGGCATGAACTTCGTTGCGGCAACCATCCTGATTCCTT
TGGGAGATGGCGGCTGTCGAACTTGTTACGCAAGGGACGGCCTACGGCCT
CCTCATCGGTCTTGGTGTGTTCTTCTGCGGGGTGATTCTCATCGCAATCA
AGGTGCAGAAGGCGTATCTGTCTGAAGACTCGGGTACGTCAGAGATGTTC
ATGGTCGCAAATCGATCGGTCGGTACGGGTTTGACTGCATCTGCTGTGTT
CTCCTCGTGGATGTGGATCAACGAGACGGTGCTATCGGCTGCGATGTGTT
ATCGCTATGGATTGGCAGTTCCACTGGACACCGCGTTCTGGCAAAAGTCT
TTTGCCAGTGAAGTGAATTCTACCGTGCCGGCATACAACCTGGCCGCAAT
AGCTGTGTTTGGTATCCCCTGGGGCTTAGGCACTGTTATTGGCCTGACCG
CTCGAGCGCTCCACCACACTCCTCTCTGGCCCACCTATCCTATTGATATC
ACGACAACTGAGGTCAGCAAAGGCATGGTCATGCCCTACCTGGTCAAGGC
CCTTCTTGGAGAGTCTGGAATGATCGCCTTCTTTGTTCTCTTGTTCATGG
CACTGACCAGCACGGTCTCCTCGTCAATGATCGCCGTCAGCAGTATCCTG
TCGTTTGATATGTACAAGACGTACATCAACCCCCAAGCCAGTGACCGCCG
GCTCTTGGGAGTTAGCCACATAACTGTCGTATTCCATGCGATCTTCATCA
CTGGCATTTCCATTGCTCTTAACTACGGGGGCGCCAACATGACGTGGATC
GGTTACTTCCGGCCTATCCTGTCTTGTCCCGGAATCATTCCTCTCGGGTT
GACTCTGTTCTGGTCCCGTCAGACCCGCCTGGCGGCTATCCTATCGCCGG
TGCTTGGCTTCTTTACTGGTCTTGCGATCTGGCTCGCAACGGCCAAGTCA
ATGTATGGGGCCGTGAACATGACCACAACTGGAGAAGAGCTGCCCGCACT
CTATGGTGCCATCGGGTCTTTCTTCTCACCCGCTCTCTACTCCGTGGTAA
TTTCTCTATATCGCCCGTACACATTTGACTGGCGAGAGTTCCTCAGAATC
GAACTCGCAGATGAAGCACCGACTAGAGCCACGCCCGCTGCAACTCAAGA
GACTAAGGTTGAAGGGGTCTATATCTCGACGGATGCCAGCCCGACGTCAA
CCCCGAGCCGCCTCAGTCTAGATGACGTTCGTCACCCTTTCACAGAAGAT
ACCCTGCGAAAGCTGCATCGATGGTCATGGATCGCATGGGCGATGTTTGT
GGTCTTGGTGCTGATTACCTTTGTGCTGTGGCCAATGCCGCTTTATCGCG
ACTATATCTTCACCAAATCCTTCTTCTCCGGATGGACCACGGTCGCGATC
ATCTGGCAATTCTGTGCCTTTTTCGCTGTTGTGGTCTACCCACTGTATGA
CGGACGGTTCGAAATTGCTAAGGGTGTACAAGGCGTACTGACGTCAAGTC
GTGAATTCCTCAACCGACACAAAAATTAGTTGTTCTTTACACGGCTGTTG
GAGGGCTGAAAGCGACGTTTTTGACCGACTTTTTGCATACCACAGTCGCC
TTAATCCTGATCATTTATTTCACACTCTCAGTCCTTACTCACCCCGAAGT
TGGCGGGTTGGCTGGACTATACGACAAGGTGGTCGCAACAGCGAGCGAGA
ATTATATCTCCGGTAACTTCGAGGGATCGCTTCTCACGATGAAATCAAAA
GGGGCGATTATTTGGGGCTTAATCTTGAAGTTTGGTAACTTAGCTCTGGT
GGTCATGTGGTGGGGATCGGGTCTTTGTTTTCAGATCGCCTTGATGGCTG
CTCTTGGTGTCATGGCCAAGATCCGGGTTCCGTATGCCCATACGTCGCTT
GAGATCACTCGTATGCGATATGGCTGGATCGGACATGTCATCTACATGGT
TTTGAATCTGACAAACAACGTTTTTGGTTGTGCCTCGATGATCTTGACCG
GGTCCCAGCTGATAAACGGTGTTTCGGGCATGAACTTCGTTGCGGCAACC
ATCCTGATTCCTTTGGGAGATGGCGGCTGTCGAACTTGTTACGCAAGGGA
CGGCCTACGGCCTCCTCATCGGTCTTGGTGTGTTCTTCTGCGGGGTGATT
CTCATCGCAATCAAGGTGCAGAAGGCGTATCTGTCTGAAGACTCGGGTAC
GTCAGAGATGTTCATGGTCGCAAATCGATCGGTCGGTACGGGTTTGACTG
CATCTGCTGTGTTCTCCTCGTGGATGTGGATCAACGAGACGGTGCTATCG
GCTGCGATGTGTTATCGCTATGGATTGGCAGTTCCACTGGACACCGCGTT
CTGGCAAAAGTCTTTTGCCAGTGAAGTGAATTCTACCGTGCCGGCATACA
ACCTGGCCGCAATAGCTGTGTTTGGTATCCCCTGGGGCTTAGGCACTGTT
ATTGGCCTGACCGCTCGAGCGCTCCACCACACTCCTCTCTGGCCCACCTA
TCCTATTGATATCACGACAACTGAGGTCAGCAAAGGCATGGTCATGCCCT
ACCTGGTCAAGGCCCTTCTTGGAGAGTCTGGAATGATCGCCTTCTTTGTT
CTCTTGTTCATGGCACTGACCAGCACGGTCTCCTCGTCAATGATCGCCGT
CAGCAGTATCCTGTCGTTTGATATGTACAAGACGTACATCAACCCCCAAG
CCAGTGACCGCCGGCTCTTGGGAGTTAGCCACATAACTGTCGTATTCCAT
GCGATCTTCATCACTGGCATTTCCATTGCTCTTAACTACGGGGGCGCCAA
CATGACGTGGATCGGTTACTTCCGGCCTATCCTGTCTTGTCCCGGAATCA
TTCCTCTCGGGTTGACTCTGTTCTGGTCCCGTCAGACCCGCCTGGCGGCT
ATCCTATCGCCGGTGCTTGGCTTCTTTACTGGTCTTGCGATCTGGCTCGC
AACGGCCAAGTCAATGTATGGGGCCGTGAACATGACCACAACTGGAGAAG
AGCTGCCCGCACTCTATGGTGCCATCGGGTCTTTCTTCTCACCCGCTCTC
TACTCCGTGGTAATTTCTCTATATCGCCCGTACACATTTGACTGGCGAGA
GTTCCTCAGAATCGAACTCGCAGATGAAGCACCGACTAGAGCCACGCCCG
CTGCAACTCAAGAGACTAAGGTTGAAGGGGTCTATATCTCGACGGATGCC
AGCCCGACGTCAACCCCGAGCCGCCTCAGTCTAGATGACGTTCGTCACCC
TTTCACAGAAGATACCCTGCGAAAGCTGCATCGATGGTCATGGATCGCAT
GGGCGATGTTTGTGGTCTTGGTGCTGATTACCTTTGTGCTGTGGCCAATG
CCGCTTTATCGCGACTATATCTTCACCAAATCCTTCTTCTCCGGATGGAC
CACGGTCGCGATCATCTGGCAATTCTGTGCCTTTTTCGCTGTTGTGGTCT
ACCCACTGTATGACGGACGGTTCGAAATTGCTAAGGGTGTACAAGGCGTA
CTGACGTCAAGTCGTGAATTCCTCAACCGACACAAAAATTAGTTGTTCTT
TACACGGCTGTTGGAGGGCTGAAAGCGACGTTTTTGACCGACTTTTTGCA
TACCACAGTCGCCTTAATCCTGATCATTTATTTCACACTCTCAGTCCTTA
CTCACCCCGAAGTTGGCGGGTTGGCTGGACTATACGACAAGGTGGTCGCA
ACAGCGAGCGAGAATTATATCTCCGGTAACTTCGAGGGATCGCTTCTCAC
GATGAAATCAAAAGGGGCGATTATTTGGGGCTTAATCTTGAAGTTTGGTA
ACTTAGCTCTGGTGGTCATGTGGTGGGGATCGGGTCTTTGTTTTCAGATC
GCCTTGATGGCTGCTCTTGGTGTCATGGCCAAGATCCGGGTTCCGTATGC
CCATACGTCGCTTGAGATCACTCGTATGCGATATGGCTGGATCGGACATG
TCATCTACATGGTTTTGAATCTGACAAACAACGTTTTTGGTTGTGCCTCG
ATGATCTTGACCGGGTCCCAGCTGATAAACGGTGTTTCGGGCATGAACTT
CGTTGCGGCAACCATCCTGATTCCTTTGGGAGATGGCGGCTGTCGAACTT
GTTACGCAAGGGACGGCCTACGGCCTCCTCATCGGTCTTGGTGTGTTCTT
CTGCGGGGTGATTCTCATCGCAATCAAGGTGCAGAAGGCGTATCTGTCTG
AAGACTCGGGTACGTCAGAGATGTTCATGGTCGCAAATCGATCGGTCGGT
ACGGGTTTGACTGCATCTGCTGTGTTCTCCTCGTGGATGTGGATCAACGA
GACGGTGCTATCGGCTGCGATGTGTTATCGCTATGGATTGGCAGTTCCAC
TG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.6 |
| DBxref | InterPro:IPR038377 |
| DBxref | InterPro:IPR001734 |
| DBxref | PFAM:PF00474 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1714982..1717169 - |
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