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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1750534..1751580+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007972-T1 ID=CBS51388_007972-T1|Name=CBS51388_007972-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1047bp|location=Sequence derived from alignment at An12:1750534..1751580+ (Aspergillus niger CBS 513.88)
ATGGCACCGAAAACGCCCGAATCACCACCCCATCGAGGTCTTCTCATCCC
CGAAGTCCTCGAACGCATCCTTATCCACCTAGACATCCGCACCCTCCTCC
TCTCCCAACGCGTCTGCACCGCCTGGGCCACAATAATCCAAGAAACCCCA
TCCCTCCAACAAGCCCTCTTTTTCGCCCCAACCCAATGCCCCGAAGAAGA
CATCATCTACAACCCCCTCCTCATCGAACGTTTCCCACCCTTCTTCCCAA
ATACCATCCACAATGACCTCGCCAAACCAAGAGACTGCTACCCGCCTCAT
TTCCTCCCCATGCAATACGTCGGCGATGACTGCGCCTGGAGCCACCCCGT
CAAAGACGACCTCACCCGAGCACAAGTCTTCTATTCCGAACTCCCTCTCC
AGAAATATCCCCTGCGCCGAAAGGCCTACCTCCATCCCGAGGCCTCCTGG
CGCCGCATGTTAACCCAGCAGCCGCCCGCACCAAACATTCCCGTTCTCCG
CGTTTGGTCCTACGCCAGATACAAGACGTTTGATCGATACCGCATCCCAG
GCACATTGAAAGATGTGATGGATCTGGAGAGATACGTCAAACAAAACCCG
AAAGACTCCGAGCCTTCATCTCCCCCCGAGGATAATAATACCATCGACCC
CGAAAACAACGGCGTCACAATGGGCCTCCTCTTCGACTACGTAACCTGTG
ATCTGGATCTCAAGTGGTGGATGATCATGTGGGGTGATCTGCCCCCCGTG
TCGATGGCGCTGGAGTTGGGACCGGAATATGTAGAGGCTTATAAGCGCGC
AGCGAAAGATGGGAGTATTGTGATCCTCACATTTCAGATCGTGCAAGGGT
TCGAGTGGTGGTATGATATTGCTGGGGCGAATGCGAAGAATTTGAGGTTT
CGTATTGTCGATGAGTATAGGGCGAGGGGGTGGGTCGGGGAGAGGCCGCC
TACGTTTTCGAATCGGTTGAGGACAGTGGAGAAGGGGAGCTTTCCGCATT
TTTCGACAATTGCGCCGTTTCTGGCGAGGTATTTGGCGCCGGGGTAG back to topCoding sequence (CDS) from alignment at An12:1750534..1751580+ >CBS51388_007972-T1 ID=CBS51388_007972-T1|Name=CBS51388_007972-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1047bp|location=Sequence derived from alignment at An12:1750534..1751580+ (Aspergillus niger CBS 513.88)
ATGGCACCGAAAACGCCCGAATCACCACCCCATCGAGGTCTTCTCATCCC
CGAAGTCCTCGAACGCATCCTTATCCACCTAGACATCCGCACCCTCCTCC
TCTCCCAACGCGTCTGCACCGCCTGGGCCACAATAATCCAAGAAACCCCA
TCCCTCCAACAAGCCCTCTTTTTCGCCCCAACCCAATGCCCCGAAGAAGA
CATCATCTACAACCCCCTCCTCATCGAACGTTTCCCACCCTTCTTCCCAA
ATACCATCCACAATGACCTCGCCAAACCAAGAGACTGCTACCCGCCTCAT
TTCCTCCCCATGCAATACGTCGGCGATGACTGCGCCTGGAGCCACCCCGT
CAAAGACGACCTCACCCGAGCACAAGTCTTCTATTCCGAACTCCCTCTCC
AGAAATATCCCCTGCGCCGAAAGGCCTACCTCCATCCCGAGGCCTCCTGG
CGCCGCATGTTAACCCAGCAGCCGCCCGCACCAAACATTCCCGTTCTCCG
CGTTTGGTCCTACGCCAGATACAAGACGTTTGATCGATACCGCATCCCAG
GCACATTGAAAGATGTGATGGATCTGGAGAGATACGTCAAACAAAACCCG
AAAGACTCCGAGCCTTCATCTCCCCCCGAGGATAATAATACCATCGACCC
CGAAAACAACGGCGTCACAATGGGCCTCCTCTTCGACTACGTAACCTGTG
ATCTGGATCTCAAGTGGTGGATGATCATGTGGGGTGATCTGCCCCCCGTG
TCGATGGCGCTGGAGTTGGGACCGGAATATGTAGAGGCTTATAAGCGCGC
AGCGAAAGATGGGAGTATTGTGATCCTCACATTTCAGATCGTGCAAGGGT
TCGAGTGGTGGTATGATATTGCTGGGGCGAATGCGAAGAATTTGAGGTTT
CGTATTGTCGATGAGTATAGGGCGAGGGGGTGGGTCGGGGAGAGGCCGCC
TACGTTTTCGAATCGGTTGAGGACAGTGGAGAAGGGGAGCTTTCCGCATT
TTTCGACAATTGCGCCGTTTCTGGCGAGGTATTTGGCGCCGGGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.6 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1750534..1751580 + |
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