|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1819048..1819675+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007998-T1 ID=CBS51388_007998-T1|Name=CBS51388_007998-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=628bp|location=Sequence derived from alignment at An12:1819048..1819675+ (Aspergillus niger CBS 513.88)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA
CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTC
ATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTTT
TTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT
ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA
CTCGGAAAAACATCCCGGAATGCGCTAA back to topCoding sequence (CDS) from alignment at An12:1819048..1819675+ >CBS51388_007998-T1 ID=CBS51388_007998-T1|Name=CBS51388_007998-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=816bp|location=Sequence derived from alignment at An12:1819048..1819675+ (Aspergillus niger CBS 513.88)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAG
CGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAA
TGCGCTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCC
AATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGAC
ACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCA
ACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGAC
AAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAA
CCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCC
TAATCGTTTGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGT
AAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACA
TCCCGGAATGCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042855 |
| DBxref | InterPro:IPR016444 |
| DBxref | InterPro:IPR001388 |
| DBxref | PFAM:PF00957 |
| Product | synaptobrevin |
| Product | SNAP receptor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1819048..1819675 + |
|
