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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1844880..1845728- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008005-T1 ID=CBS51388_008005-T1|Name=CBS51388_008005-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=849bp|location=Sequence derived from alignment at An12:1844880..1845728- (Aspergillus niger CBS 513.88)
ATGCCTCCCCTACGAACCAAAGTCTTCATCAACGTCGACCTCGGCGAGGG
CTACGGGAACTTCAAATGCGGCCCAGACGAAGAACTAATCCCCCTCATCG
ACCAGGCCAACGTAGCCTGCGGATTTCAGTAAGTAGCATAGCTATCCACC
GCGTCCCTTCAGCCACAAACCACCAAACCAAATCTAATCCCGAATTCCCT
TTTATTACCTAGTGCCGGTGACCCCCTCATCATGCAAGAGACCGTCTCCC
TATGCAAAAAGCACAACATAACCATCGGCGCCCACCCCGGCCTCCCCGAC
GTGCAAGGCTTCGGCCGCCGCGAAATGAAGCTCACAGCAGAAGAGCACAC
AGCCAACATAATATACCAAGTCGGGGCTTTGCAAGGCTTCCTAGCACGCG
AAAATATCCCCCTCCACCACGTCAAGCCGCACGGCGTGCTCTACGGCATG
ATGTGTCGCGATCTGGAAGTCGCACGGGCTGTAATAAGGGGAATACCTGC
TGGCGTGCCAGTGGTGGGCCTAGGAGGAACATACATGGAGCAGGCGGCGA
AGGAGCTCGGGGTGCCGTTTTGGGCGGAGCTGTTCGGGGATGTCAAGTAC
GGGCCCGATGGGATGCTGGTTATTGATCGGAAGAAGAAGCCATGGAAGAT
TGAGGATGTCAAGGCGCATGTGAGGCAGCAGGTGGAGGACTCATCGGCGA
CGGCTGTTGATGGGTCGGTGGTGCAGATGGGGGTCAAGGATTACCCGGTG
ACGATTTGTTGTCATTCGGATTCGCCGGGGTGTTTGGAGATTGTGAGGGC
TACAAGGGAGGTGGTTGATGAGTTTAATAAGGCGAATGGGTTTGCCTGA back to topCoding sequence (CDS) from alignment at An12:1844880..1845728- >CBS51388_008005-T1 ID=CBS51388_008005-T1|Name=CBS51388_008005-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1530bp|location=Sequence derived from alignment at An12:1844880..1845728- (Aspergillus niger CBS 513.88)
TGCCGGTGACCCCCTCATCATGCAAGAGACCGTCTCCCTATGCAAAAAGC
ACAACATAACCATCGGCGCCCACCCCGGCCTCCCCGACGTGCAAGGCTTC
GGCCGCCGCGAAATGAAGCTCACAGCAGAAGAGCACACAGCCAACATAAT
ATACCAAGTCGGGGCTTTGCAAGGCTTCCTAGCACGCGAAAATATCCCCC
TCCACCACGTCAAGCCGCACGGCGTGCTCTACGGCATGATGTGTCGCGAT
CTGGAAGTCGCACGGGCTGTAATAAGGGGAATACCTGCTGGCGTGCCAGT
GGTGGGCCTAGGAGGAACATACATGGAGCAGGCGGCGAAGGAGCTCGGGG
TGCCGTTTTGGGCGGAGCTGTTCGGGGATGTCAAGTACGGGCCCGATGGG
ATGCTGGTTATTGATCGGAAGAAGAAGCCATGGAAGATTGAGGATGTCAA
GGCGCATGTGAGGCAGCAGGTGGAGGACTCATCGGCGACGGCTGTTGATG
GGTCGGTGGTGCAGATGGGGGTCAAGGATTACCCGGTGACGATTTGTTGT
CATTCGGATTCGCCGGGGTGTTTGGAGATTGTGAGGGCTACAAGGGAGGT
GGTTGATGAGTTTAATAAGGCGAATGGGTTTGCCTGAATGCCTCCCCTAC
GAACCAAAGTCTTCATCAACGTCGACCTCGGCGAGGGCTACGGGAACTTC
AAATGCGGCCCAGACGAAGAACTAATCCCCCTCATCGACCAGGCCAACGT
AGCCTGCGGATTTCATGCCGGTGACCCCCTCATCATGCAAGAGACCGTCT
CCCTATGCAAAAAGCACAACATAACCATCGGCGCCCACCCCGGCCTCCCC
GACGTGCAAGGCTTCGGCCGCCGCGAAATGAAGCTCACAGCAGAAGAGCA
CACAGCCAACATAATATACCAAGTCGGGGCTTTGCAAGGCTTCCTAGCAC
GCGAAAATATCCCCCTCCACCACGTCAAGCCGCACGGCGTGCTCTACGGC
ATGATGTGTCGCGATCTGGAAGTCGCACGGGCTGTAATAAGGGGAATACC
TGCTGGCGTGCCAGTGGTGGGCCTAGGAGGAACATACATGGAGCAGGCGG
CGAAGGAGCTCGGGGTGCCGTTTTGGGCGGAGCTGTTCGGGGATGTCAAG
TACGGGCCCGATGGGATGCTGGTTATTGATCGGAAGAAGAAGCCATGGAA
GATTGAGGATGTCAAGGCGCATGTGAGGCAGCAGGTGGAGGACTCATCGG
CGACGGCTGTTGATGGGTCGGTGGTGCAGATGGGGGTCAAGGATTACCCG
GTGACGATTTGTTGTCATTCGGATTCGCCGGGGTGTTTGGAGATTGTGAG
GGCTACAAGGGAGGTGGTTGATGAGTTTAATAAGGCGAATGGGTTTGCCT
GAATGCCTCCCCTACGAACCAAAGTCTTCATCAACGTCGACCTCGGCGAG
GGCTACGGGAACTTCAAATGCGGCCCAGACGAAGAACTAATCCCCCTCAT
CGACCAGGCCAACGTAGCCTGCGGATTTCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011330 |
| DBxref | InterPro:IPR005501 |
| DBxref | PFAM:PF03746 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1844880..1845728 - |
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