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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1892227..1893608- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008025-T1 ID=CBS51388_008025-T1|Name=CBS51388_008025-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1382bp|location=Sequence derived from alignment at An12:1892227..1893608- (Aspergillus niger CBS 513.88)
ATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACT
CTTGACCCAGGACAACAGACTGGTGAGTTCAATTTCCATCCCCACACACT
TACAGCAAGCGATTGACGCACGAGCCTGCACGATATTGCCTCAAAATAAT
CCACTCTTCTTTCAGAGTAGCCCTGATACTCAACTAACCCGCCCCAGATC
GAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTATCGT
CGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCGCCA
ACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAGACC
CCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCTCGT
CTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCACTCT
CCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTTGAG
ACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACACCTT
CCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGCTGA
CTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACGGCG
GGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGATCG
CATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACTTTG
TCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATGAAT
ATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGGCAC
TATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAAGAC
AGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCTACT
GCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATCACG
GCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGCCGT
TCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAGGTG
GGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGATGA
AGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATTACGAGACACCGC
CATCTCCGCCGGAGAAGGACGAGGACGAGGGCGAAGGCAAGGACGAGGAA
GAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGAGGA
AGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGGGTG
GAGAAGGGGACTTTAATGAAGTCCCTCTGTAA back to topCoding sequence (CDS) from alignment at An12:1892227..1893608- >CBS51388_008025-T1 ID=CBS51388_008025-T1|Name=CBS51388_008025-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2514bp|location=Sequence derived from alignment at An12:1892227..1893608- (Aspergillus niger CBS 513.88)
ATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTAT
CGTCGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCG
CCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAG
ACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCT
CGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCAC
TCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTT
GAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACAC
CTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGC
TGACTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACG
GCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGA
TCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACT
TTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATG
AATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGG
CACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAA
GACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCT
ACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATC
ACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGC
CGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAG
GTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGA
TGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATTACGAGACAC
CGCCATCTCCGCCGGAGAAGGACGAGGACGAGGGCGAAGGCAAGGACGAG
GAAGAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGA
GGAAGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGG
GTGGAGAAGGGGACTTTAATGAAGTCCCTCTGTAAATGTTGGTCTCCTTG
ACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCTTGACCCAGGACAA
CAGACTGATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCG
GTAGTATCGTCGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCC
AGTGCCGCCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGG
CATCAAGACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAA
CTTCCCTCGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTG
AAATCACTCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCG
TCCGCTTGAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCG
AATACACCTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCG
GAGAAGCTGACTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCAC
GGTGACGGCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTG
CGTTGGATCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACC
ACCCACTTTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGT
TGAGATGAATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGG
CCGAAGGCACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCC
AAGGCAAGACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAAC
GGTTTCTACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGA
CCCCATCACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCG
GTTACGCCGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGA
GAAGGAGGTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTC
CGAAGGATGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATTAC
GAGACACCGCCATCTCCGCCGGAGAAGGACGAGGACGAGGGCGAAGGCAA
GGACGAGGAAGAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAG
AGGAAGAGGAAGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCA
AAGGAGGGTGGAGAAGGGGACTTTAATGAAGTCCCTCTGTAAATGTTGGT
CTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCTTGACCC
AGGACAACAGACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092612CC |
| DBxref | InterPro:IPR036116 |
| DBxref | InterPro:IPR003961 |
| DBxref | InterPro:IPR013783 |
| DBxref | InterPro:IPR036420 |
| DBxref | InterPro:IPR031669 |
| DBxref | InterPro:IPR031673 |
| DBxref | InterPro:IPR001357 |
| DBxref | PFAM:PF12738 |
| DBxref | PFAM:PF16893 |
| DBxref | PFAM:PF16892 |
| DBxref | PFAM:PF00533 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1892227..1893608 - |
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