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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1895269..1895966+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008026-T1 ID=CBS51388_008026-T1|Name=CBS51388_008026-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=698bp|location=Sequence derived from alignment at An12:1895269..1895966+ (Aspergillus niger CBS 513.88)
ATGCCCAAGAACAAGGGAAAGGTGAGTTTGTGCTGCATCCCACCCGGGTA
CCCCGCCTTACAGATTCTCGCTTTGTTTTACGCTTGACTCTGGAGCGCAC
CTCATGCCACCATATCCCACCTCAACGACACACTTCAGCCCAGAAGATGT
GGGATAAGGCGGCATAGAGGCTGTTATACCAATAGAGCATTGCAGAACGA
AGCGAACCTGCGCCACAAGTCTGTACGCATGTCTAGGACAGTTTTGCTGA
CGTATCTGCATTCAAACAGGGCGGTAAGAACCGTCGTCGTGGAAAGAACG
AGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGGAG
TATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTTTG
CTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAAGA
AGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACTAC
CAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCCAG
AAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGAGA
CCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACGAG
GACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA back to topCoding sequence (CDS) from alignment at An12:1895269..1895966+ >CBS51388_008026-T1 ID=CBS51388_008026-T1|Name=CBS51388_008026-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=900bp|location=Sequence derived from alignment at An12:1895269..1895966+ (Aspergillus niger CBS 513.88)
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652Y6 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR018104 |
| DBxref | InterPro:IPR006196 |
| DBxref | InterPro:IPR001253 |
| DBxref | PFAM:PF01176 |
| Product | Y-chromosomal |
| Product | Eukaryotic translation initiation factor 1A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1895269..1895966 + |
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