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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1990002..1990806+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008053-T1 ID=CBS51388_008053-T1|Name=CBS51388_008053-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=805bp|location=Sequence derived from alignment at An12:1990002..1990806+ (Aspergillus niger CBS 513.88)
ATGGTGATTATCAACCTTGTCCAGGGGATCGGTTTACAATCCAAGCTAAC
AGAACCAGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCA
TTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAG
ACAGTACGTTGGGCCGGTTCCCATCCCCTCACCCTTTTGGGTCGGACCAG
GCTAATTATGTATCTGGATAGCAATGTCCCCGAAATTGAAGCCGCAACTT
CTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAG
AGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAAT
CAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGT
TCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTG
AAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGAT
GCTGAAACACAAATTGGTGGACTTCATCATTCAATTGTATGTTTCATCTG
CCTTGTCCATATGTCATTCGATCAATGAGAGGCTAACGATTTCTTCGTCT
AATAGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCGT
ATGTGTCCATGTCCATCTGATTGATGGAGGCTTCTAACCCACATTTGCTG
TAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGGT
AAGTCGCCCTGGCTACTTCAGCTGAACCTGGCTGATAAAATTACAGTTTG
ATTAG back to topCoding sequence (CDS) from alignment at An12:1990002..1990806+ >CBS51388_008053-T1 ID=CBS51388_008053-T1|Name=CBS51388_008053-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An12:1990002..1990806+ (Aspergillus niger CBS 513.88)
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGAT
CTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCC
GAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACT
TCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCG
AGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGAT
GAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCG
CGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACA
TTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAAA
TTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTC
GGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGT
TCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTG
GCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTC
TCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTC
CGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGG
GTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAA
GCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCC
TGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAG
GGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCT
GAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATA
AGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTT
GCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCC
GTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGA
ACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCC
GCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGA
GAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCA
TCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTC
ACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAA
GCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTG
AACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAG
GAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGC
TCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAAT
CATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTC
GCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGA
AATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCT
CCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTC
CGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGT
CCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTC
TACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAAC
TTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCA
ATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGA
ATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAG
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005885 | Arp2/3 protein complex |
| GO:0015629 | actin cytoskeleton |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030833 | regulation of actin filament polymerization |
| GO:0034314 | Arp2/3 complex-mediated actin nucleation |
| GO:0030041 | actin filament polymerization |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CCT |
| DBxref | InterPro:IPR034666 |
| DBxref | InterPro:IPR008384 |
| DBxref | PFAM:PF05856 |
| Product | Actin- protein 2/3 complex subunit 4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1990002..1990806 + |
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