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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1991756..1993685+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008054-T1 ID=CBS51388_008054-T1|Name=CBS51388_008054-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1930bp|location=Sequence derived from alignment at An12:1991756..1993685+ (Aspergillus niger CBS 513.88)
ATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACC
TCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAG
GTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACG
AATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATG
CCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACG
GCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCC
ACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCG
CTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACGTGAGTG
ACTGGCTGACTCGATTCTCGGCGACGTCTACTAACCTTGGGCCAGATCCC
CTATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCAC
GACTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCT
AAGACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGA
GACGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGAC
TCGGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTG
AAAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCC
TAAGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTT
TTACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAA
CGTGTAAGTCCTTCAGCCGGTGTCATTTTATAGCAGCAATGTCTAACAAC
TTCTTAGTCTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGAATCTA
CCATAAGCACGCTCTATAAGGTAGAGTTTTATTCAGCTGAAGGTGATAGT
ATTCTGACAGAGCACAGTTTCCTTGGTATGCAACCGACATGTACACCGTG
CACGACCGTAACCAGCTATTCGAGTTGACAAACCGCCACATACGTTCTCT
GGTGTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTGC
TTCGCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGC
CAGAAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAA
GTTGGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGC
CTGGCTTTGATTATGACACCTGCGCGGTATGTCCCCTTCCAGAACTATAT
TAGTCTGTCCATACTCTTCTTGGCGTGCTGTCTAGTCATGCATTCTTCGC
CCACTATTTCTTTCCACTGATAGCTGCAGCAGTTGTATGCCAACGTCATC
GCAAACGGTAGATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCC
TGAAGACAATACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGT
GGCCAACCGATGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGT
GAAACCAATGTGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAAT
CCACAGACCACTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCT
CTCCAATCACTGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTC
AGCATTTTGCAGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGG
CAGCGTTCTTCTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTA
GCCCGCCTAACAGGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCG
CCCAACTGTCTCAAGGATCTAAACCAGTGA back to topCoding sequence (CDS) from alignment at An12:1991756..1993685+ >CBS51388_008054-T1 ID=CBS51388_008054-T1|Name=CBS51388_008054-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8400bp|location=Sequence derived from alignment at An12:1991756..1993685+ (Aspergillus niger CBS 513.88)
ATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACC
TCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAG
GTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACG
AATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATG
CCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACG
GCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCC
ACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCG
CTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACATCCCCT
ATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGA
CTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAA
GACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGA
CGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTC
GGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAA
AGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTA
AGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTT
ACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACG
TTCTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGAATCTACCATAA
GCACGCTCTATAAGTTTCCTTGGTATGCAACCGACATGTACACCGTGCAC
GACCGTAACCAGCTATTCGAGTTGACAAACCGCCACATACGTTCTCTGGT
GTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTC
GCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAG
AAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTT
GGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTG
GCTTTGATTATGACACCTGCGCGCTGCAGCAGTTGTATGCCAACGTCATC
GCAAACGGTAGATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCC
TGAAGACAATACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGT
GGCCAACCGATGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGT
GAAACCAATGTGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAAT
CCACAGACCACTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCT
CTCCAATCACTGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTC
AGCATTTTGCAGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGG
CAGCGTTCTTCTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTA
GCCCGCCTAACAGGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCG
CCCAACTGTCTCAAGGATCTAAACCAGTGAATGCCTCCTTTCGGTAGGAT
TCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACGATCCTGTCGCCC
CAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCCCCAAGCCCATCT
ACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCTCACCCCGGTTCC
TGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTACCACTCCCTTGA
CTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCATAAGCTTGGACCA
CACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAGAGCTGCTCCGCC
CAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGGAACCCCCTATCT
GGGGCGTCATCAAAATTTCAAACATCCCCTATTCCATCACCAAGCAGGAG
ATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTTCCAGGCCACGCAGT
ACACATAATCATGGAACGTCCCACTGCTAAGACGATGGACTGTTTTGTGG
AGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGAACCGAATCAACCGA
ATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAATAGACACGTTGAAGT
TGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTTGTTTCCACGTGCAA
AGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTGTGGAGAATACTGAT
AGATATTCCACCGGCTTTACTGGCTTTTTTACCAGCGAAGAGATCATCGG
CGCCATTCGTCATGCTGAAATACCTCAACGTTCTCCCTTCGGTGCCAAGT
GTCCGCAGCGTACTTACGAATCTACCATAAGCACGCTCTATAAGTTTCCT
TGGTATGCAACCGACATGTACACCGTGCACGACCGTAACCAGCTATTCGA
GTTGACAAACCGCCACATACGTTCTCTGGTGTCACGGATGGAAAAGACCA
AGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCTCTACGCCGGT
CTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCCTTTGCATTCA
CGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATGAGCAAGTGGT
TCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTATGACACCTGC
GCGCTGCAGCAGTTGTATGCCAACGTCATCGCAAACGGTAGATTCGAGGG
CGCCTGCCGCGAGTTCCCGAACAATTTCCCTGAAGACAATACCACTCTCC
TATCACCCTTCGGTCGCATTTGGTTTGAGTGGCCAACCGATGTCGCTAAG
AATACTCTTTGGGTTGACGCCGTTAATCGTGAAACCAATGTGCTCAACTG
TCTTCTTCAGAGCGGCTCCATGGGAACAATCCACAGACCACTTTCGATGA
CCAGCACCTCAAGCAATGTTTCTCCCACCTCTCCAATCACTGATAAAAGT
GTGCCACGAAACGAGAATGTGTCCCGGGTCAGCATTTTGCAGGCCTCATC
GCGTCGTGCCAGCGAATGCTGGAACAGCGGCAGCGTTCTTCTTGATACCG
AAGGCGTTTGGAGTCAGAAGGTGTTCTTTAGCCCGCCTAACAGGTTCCGA
ACTCCTAGTCACCGCATCACCCATTCATCGCCCAACTGTCTCAAGGATCT
AAACCAGTGAATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGC
CTCATGAACCTCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGAT
CCTTTCCTAGGTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCC
TTTTGCTACGAATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCC
AACAGCCATGCCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTG
ATGAATAACGGCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATA
TCCCAACCCCACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGA
GCTTGGTCCGCTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCA
AACATCCCCTATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAG
ACAGGCACGACTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTC
CCACTGCTAAGACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGAT
GCTGAAGAGACGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGC
GCCTCGACTCGGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGG
AACTGCTGAAAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAAT
GGTACGCCTAAGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTAC
TGGCTTTTTTACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAA
TACCTCAACGTTCTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGAA
TCTACCATAAGCACGCTCTATAAGTTTCCTTGGTATGCAACCGACATGTA
CACCGTGCACGACCGTAACCAGCTATTCGAGTTGACAAACCGCCACATAC
GTTCTCTGGTGTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACCAA
CGTCTGCTTCGCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAA
TGAGCGCCAGAAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAA
TTCTCAAGTTGGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTC
TACTTGCCTGGCTTTGATTATGACACCTGCGCGCTGCAGCAGTTGTATGC
CAACGTCATCGCAAACGGTAGATTCGAGGGCGCCTGCCGCGAGTTCCCGA
ACAATTTCCCTGAAGACAATACCACTCTCCTATCACCCTTCGGTCGCATT
TGGTTTGAGTGGCCAACCGATGTCGCTAAGAATACTCTTTGGGTTGACGC
CGTTAATCGTGAAACCAATGTGCTCAACTGTCTTCTTCAGAGCGGCTCCA
TGGGAACAATCCACAGACCACTTTCGATGACCAGCACCTCAAGCAATGTT
TCTCCCACCTCTCCAATCACTGATAAAAGTGTGCCACGAAACGAGAATGT
GTCCCGGGTCAGCATTTTGCAGGCCTCATCGCGTCGTGCCAGCGAATGCT
GGAACAGCGGCAGCGTTCTTCTTGATACCGAAGGCGTTTGGAGTCAGAAG
GTGTTCTTTAGCCCGCCTAACAGGTTCCGAACTCCTAGTCACCGCATCAC
CCATTCATCGCCCAACTGTCTCAAGGATCTAAACCAGTGAATGCCTCCTT
TCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACGAT
CCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCCCC
AAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCTCA
CCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTACC
ACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCATAA
GCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAGAG
CTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGGAA
CCCCCTATCTGGGGCGTCATCAAAATTTCAAACATCCCCTATTCCATCAC
CAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTTCCAG
GCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAAGACGATGGAC
TGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGAACCG
AATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAATAGAC
ACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTTGTTT
CCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTGTGGA
GAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTTACCAGCGAAG
AGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACGTTCTCCCTTC
GGTGCCAAGTGTCCGCAGCGTACTTACGAATCTACCATAAGCACGCTCTA
TAAGTTTCCTTGGTATGCAACCGACATGTACACCGTGCACGACCGTAACC
AGCTATTCGAGTTGACAAACCGCCACATACGTTCTCTGGTGTCACGGATG
GAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCT
CTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCC
TTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATG
AGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTA
TGACACCTGCGCGCTGCAGCAGTTGTATGCCAACGTCATCGCAAACGGTA
GATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCCTGAAGACAAT
ACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGTGGCCAACCGA
TGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGTGAAACCAATG
TGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAATCCACAGACCA
CTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCTCTCCAATCAC
TGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTCAGCATTTTGC
AGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGGCAGCGTTCTT
CTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTAGCCCGCCTAA
CAGGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCGCCCAACTGTC
TCAAGGATCTAAACCAGTGAATGCCTCCTTTCGGTAGGATTCCCGTCACT
CTCCCCAGGCCTCATGAACCTCACTACGATCCTGTCGCCCCAAGAAATGT
GTATTACGATCCTTTCCTAGGTTACGCCCCAAGCCCATCTACTGACACTG
TCTGTATCCCTTTTGCTACGAATCGCCTCACCCCGGTTCCTGTTCAACCA
GGTCAGCTCCAACAGCCATGCCCCTCTACCACTCCCTTGACTTCTTCCAG
CATCCCTGTGATGAATAACGGCATTCATAAGCTTGGACCACACGTGAATT
TTGCAGGATATCCCAACCCCACTAGCAGAGCTGCTCCGCCCAACGAGGTG
CCATACGGGAGCTTGGTCCGCTACATGGAACCCCCTATCTGGGGCGTCAT
CAAAATTTCAAACATCCCCTATTCCATCACCAAGCAGGAGATCTTCCAGT
TTGTTGGCAGACAGGCACGACTTGTTCCAGGCCACGCAGTACACATAATC
ATGGAACGTCCCACTGCTAAGACGATGGACTGTTTTGTGGAGTTTGCTTC
GACTGAAGATGCTGAAGAGACGGCGAACCGAATCAACCGAATCTATGAGT
GTGGGCGTGCGCCTCGACTCGGCAATAGACACGTTGAAGTTGAGCTCAGC
AACCAAGAGGAACTGCTGAAAGTTTTGTTTCCACGTGCAAAGTGCATCAG
CTGGGAAAATGGTACGCCTAAGGTTGTGGAGAATACTGATAGATATTCCA
CCGGCTTTACTGGCTTTTTTACCAGCGAAGAGATCATCGGCGCCATTCGT
CATGCTGAAATACCTCAACGTTCTCCCTTCGGTGCCAAGTGTCCGCAGCG
TACTTACGAATCTACCATAAGCACGCTCTATAAGTTTCCTTGGTATGCAA
CCGACATGTACACCGTGCACGACCGTAACCAGCTATTCGAGTTGACAAAC
CGCCACATACGTTCTCTGGTGTCACGGATGGAAAAGACCAAGACCGTTGG
GCTTGACCAACGTCTGCTTCGCGAGCTCCTCTACGCCGGTCTAAATTGCC
CTGTATTTAATGAGCGCCAGAAGTATACCCTTTGCATTCACGCCGGCGAG
AAAAGCGAAATTCTCAAGTTGGGAGACATGAGCAAGTGGTTCCCCTTCGA
TACTCTGGTCTACTTGCCTGGCTTTGATTATGACACCTGCGCGCTGCAGC
AGTTGTATGCCAACGTCATCGCAAACGGTAGATTCGAGGGCGCCTGCCGC
GAGTTCCCGAACAATTTCCCTGAAGACAATACCACTCTCCTATCACCCTT
CGGTCGCATTTGGTTTGAGTGGCCAACCGATGTCGCTAAGAATACTCTTT
GGGTTGACGCCGTTAATCGTGAAACCAATGTGCTCAACTGTCTTCTTCAG
AGCGGCTCCATGGGAACAATCCACAGACCACTTTCGATGACCAGCACCTC
AAGCAATGTTTCTCCCACCTCTCCAATCACTGATAAAAGTGTGCCACGAA
ACGAGAATGTGTCCCGGGTCAGCATTTTGCAGGCCTCATCGCGTCGTGCC
AGCGAATGCTGGAACAGCGGCAGCGTTCTTCTTGATACCGAAGGCGTTTG
GAGTCAGAAGGTGTTCTTTAGCCCGCCTAACAGGTTCCGAACTCCTAGTC
ACCGCATCACCCATTCATCGCCCAACTGTCTCAAGGATCTAAACCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR012677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1991756..1993685 + |
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