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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2199245..2200849+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008101-T1 ID=CBS51388_008101-T1|Name=CBS51388_008101-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1605bp|location=Sequence derived from alignment at An12:2199245..2200849+ (Aspergillus niger CBS 513.88)
ATGCTTCGCATGCTTAGACCAGGTAGACGCATCCCCACTCATCCTTCGCG
GTCATTCTCCACCACTCCCCACAGATCCAACGACTCCCCCGCCCTCAACT
TCCGCTCATTGCTCTCCGCCCTCCGCGCCCAGGACGACCTCGTCGACATC
ACCCAGCCCGCTTCGCCTGACCTTGAAATCGCTGCTCTGACTCGTCGTGT
GTACGAATCACACTCACCCGCCCCGTTATTCCATAATGTCACCGACACAG
ACCCTGAAACCGGCCTTTTCAAGATCCTCGGTGCCCCCGTCGGCCTCCGC
GCTGACCCCGCTACTCGGTTTGGCCGTTTAGCCATTCAACTCGGCCTGCC
CCAAAATGCCACCCCGCTCGACATCCTCGAGAAGCTCATCGCGGCGAAAC
ACTCCACCCCACTCCCTCCCACTCCAGTTCCGGCTTCATCTGCCCCATGC
AAAGAGAACATCCTTCACGGGTCGCAGATCGACATGACCAAATGGCCTAT
TCCGCGCCTTCACCCATTAGACGGGGGGAACTACCTCGCCACGTATGGGT
TCCATATCCTCCAATCACCAGATAAAGCATGGACCTCATGGTCGATCTCC
CGTACTATGCATGTCGCAAATACACCTCGTACCATCGTCGCACCAATAAT
GCCGGGCCAGCATATCGCCCAGGTGCATCAGATGTGGGCTGACCAGGGCG
CTAAAGATACGCCTTGGGCACTGGTACTAGGTGGACCTCCAGCTGCCGCG
TTCGTTGGGGGAATGCCTCTCCCCGCGTTCGTGTCAGAGGATGGCTACAT
CGGTGCTCTCTGCGGCGAGGCAATGGATGTGGTGAAGTGCGAGACGAATG
ACCTGTATGTCCCCGCCAATGCGGAAATCGTCCTCGAAGGCCGCATCAGC
ACGACCGAGAAAGTCGGCGAGGGCCCGATGGGCGAGTACCATGGGTACAT
GTTCCAGGACAAGGCGGTGCCCGAGCCGAGAATCGAAGTGGACTGTGTGA
CGTATCGGCGGGATCCGGTGGTGCCGATCTGCGTGGCGGGGTTAGCGCCG
GACGAGACGCACACGGTGTGGGGGGCAGCGATATCAGCGGAGATTTTGGA
TGCGCTGAGGGGGGCGGAGTTACCGGTGAAGATGGCTTGGATGCCGTATG
AGGCGCAGTGCTGTTGGGTGGTGGTTAGTGTGGATGTGGAGAGGCTGGGC
AGGATGGGGATCAAGAAGGAGGAGTTGTCGAGGAGGGTCGGGGAGGTGGT
TTTCGGGACTCATGCGGGGTGGGAGGCACCGAAGGTGTTTGTTGTCGGGG
ATGATGTTGATGTTACTGATATTGGGCAGTTCGTGTGGGCGTTGGCGACG
AGGTATCGGCCTGGGGCGGATGAGTTGGTGTTCGAGGAGGCGGACGGGTT
GCCGATGATTCCGTATATGACCAGGGCGAGTAGGAGGGAGGTGCCGAATC
CGGGGAAGGGTGGAAAGAGTGTGGTGAACTTGTTGTTGCCATCGGAGTTT
GAGGGGAAGAGGCCGTGGGTGCCGGGAAGTTTTGAGGGGTTGTATTCGGA
GGAGTTGAAGCAGAAGGTGTTGGGTAGATGGGGAGAGCTGTTTGAGAAGA
AGTGA back to topCoding sequence (CDS) from alignment at An12:2199245..2200849+ >CBS51388_008101-T1 ID=CBS51388_008101-T1|Name=CBS51388_008101-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1605bp|location=Sequence derived from alignment at An12:2199245..2200849+ (Aspergillus niger CBS 513.88)
ATGCTTCGCATGCTTAGACCAGGTAGACGCATCCCCACTCATCCTTCGCG
GTCATTCTCCACCACTCCCCACAGATCCAACGACTCCCCCGCCCTCAACT
TCCGCTCATTGCTCTCCGCCCTCCGCGCCCAGGACGACCTCGTCGACATC
ACCCAGCCCGCTTCGCCTGACCTTGAAATCGCTGCTCTGACTCGTCGTGT
GTACGAATCACACTCACCCGCCCCGTTATTCCATAATGTCACCGACACAG
ACCCTGAAACCGGCCTTTTCAAGATCCTCGGTGCCCCCGTCGGCCTCCGC
GCTGACCCCGCTACTCGGTTTGGCCGTTTAGCCATTCAACTCGGCCTGCC
CCAAAATGCCACCCCGCTCGACATCCTCGAGAAGCTCATCGCGGCGAAAC
ACTCCACCCCACTCCCTCCCACTCCAGTTCCGGCTTCATCTGCCCCATGC
AAAGAGAACATCCTTCACGGGTCGCAGATCGACATGACCAAATGGCCTAT
TCCGCGCCTTCACCCATTAGACGGGGGGAACTACCTCGCCACGTATGGGT
TCCATATCCTCCAATCACCAGATAAAGCATGGACCTCATGGTCGATCTCC
CGTACTATGCATGTCGCAAATACACCTCGTACCATCGTCGCACCAATAAT
GCCGGGCCAGCATATCGCCCAGGTGCATCAGATGTGGGCTGACCAGGGCG
CTAAAGATACGCCTTGGGCACTGGTACTAGGTGGACCTCCAGCTGCCGCG
TTCGTTGGGGGAATGCCTCTCCCCGCGTTCGTGTCAGAGGATGGCTACAT
CGGTGCTCTCTGCGGCGAGGCAATGGATGTGGTGAAGTGCGAGACGAATG
ACCTGTATGTCCCCGCCAATGCGGAAATCGTCCTCGAAGGCCGCATCAGC
ACGACCGAGAAAGTCGGCGAGGGCCCGATGGGCGAGTACCATGGGTACAT
GTTCCAGGACAAGGCGGTGCCCGAGCCGAGAATCGAAGTGGACTGTGTGA
CGTATCGGCGGGATCCGGTGGTGCCGATCTGCGTGGCGGGGTTAGCGCCG
GACGAGACGCACACGGTGTGGGGGGCAGCGATATCAGCGGAGATTTTGGA
TGCGCTGAGGGGGGCGGAGTTACCGGTGAAGATGGCTTGGATGCCGTATG
AGGCGCAGTGCTGTTGGGTGGTGGTTAGTGTGGATGTGGAGAGGCTGGGC
AGGATGGGGATCAAGAAGGAGGAGTTGTCGAGGAGGGTCGGGGAGGTGGT
TTTCGGGACTCATGCGGGGTGGGAGGCACCGAAGGTGTTTGTTGTCGGGG
ATGATGTTGATGTTACTGATATTGGGCAGTTCGTGTGGGCGTTGGCGACG
AGGTATCGGCCTGGGGCGGATGAGTTGGTGTTCGAGGAGGCGGACGGGTT
GCCGATGATTCCGTATATGACCAGGGCGAGTAGGAGGGAGGTGCCGAATC
CGGGGAAGGGTGGAAAGAGTGTGGTGAACTTGTTGTTGCCATCGGAGTTT
GAGGGGAAGAGGCCGTGGGTGCCGGGAAGTTTTGAGGGGTTGTATTCGGA
GGAGTTGAAGCAGAAGGTGTTGGGTAGATGGGGAGAGCTGTTTGAGAAGA
AGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016831 | carboxy-lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032903 |
| DBxref | InterPro:IPR002830 |
| DBxref | PFAM:PF01977 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2199245..2200849 + |
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