|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2255251..2257045+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008120-T1 ID=CBS51388_008120-T1|Name=CBS51388_008120-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1795bp|location=Sequence derived from alignment at An12:2255251..2257045+ (Aspergillus niger CBS 513.88)
ATGATTCAGGCCGAATCGCAGACAATAGCTGCGTCTGCGACTGCTCCCAC
GGATAAAGATGTCGCCTGGGCCATAGTCAGTGAAGAAGCGGGGGAGATTG
ACCCCGCCGTGGAGAAGAGGGTGGTGCGCAAGATTGATGCTTTTTTCATG
CCTGCTATGTTAATTGGTTCGTTATATTTATCTTCTTCATTTGCGTGTTT
GGTGTTTGTTTTTCGTGCGAGGTGATCGTTGGAATTGGATAAATTGGCAT
ATTGTTGACTTATAACATTGTAGGATATGGATTTGTTTACTGGGATAAGG
TTCGTCATGAGCACGCTCCAACTTGATATGTCTTCAACCTATTGACTAGA
AGCTACTATTTGTAGGCCATTCTTGGCAGCGCATCACTGTTCGGCATGAC
AACCGATTTGCAACTGCAGGTCATGGATTACTCCACATCGCCTGCCACCA
AAGATACCTCCCGTCTCAGCTGGGCCACCTCCATCTTCTACTTTGGTATG
ATGGCCGGGTTGTACCCCATGACCTTTGTGCTGCAGCGGTTTCGTATCCA
GCACGTCTTGGGGCCGGTCGTCATGCTGTGGGCCATTACCTGTGCTGCTA
CGGCGGGAGTCACCTCGTGGCGGGGGTTGTTTGTGCAGCGGTTTTTTCTG
GGTATTTTCCCTGCTCTACATTTACATGACATAGTTGACTGATTATATAG
GCTTCGTGGAGAGTGTCATCCCTACCGGCTTCATGACTGTCGTCAGTGGT
TACTATACCCAAGACGAGCAGAGTCTGCGCCAGGCCTGGTGGTTCTCCGG
TACCGGGTGGTTCACCATTATCGGAAGTGCGCTCAACTATGCGTTTGGAC
AGATCGATTCTGGCAGCCTTAGGCCTTGGCAGTATATCTACATTTTCGCC
GGTGTGCTGACTTTTCTATTCGGGATCTGGTGCTGTGCCATGCCCAATTC
GCCCGTCGAGGCGTGGTTTCTGACCCATGAGGAAAGAGTAGTGGCCGTGG
AGCGCCTGCGTCGGGGACAGACTGGTGTGCGCTGCCAGGTGATCAAGAAA
GATCAAATTGTGGAGGCATTCCTGGACATCAAATTGTATTTGATTGCTAT
TATGATGGCTGCAGCGTGAGTAATCCCGCAAACCCGACAAGCATTGCTAA
AATCTAATGCATCCTAGGTATACTATTAACGGCGCCATTTCCGGATTCGG
CCCCCTGATCGTGTCAACCTTTGGCTACAACACCCTCGACTCCATTCTGT
TCCAATTCCCAGTGGGTGGGGTCTGCGTCATCTTCATCCCCCTCTGCGGT
TACATCGGCATGCGCGTTCCTAACACGCGCATTCCCATGCTCATCGCCTG
CTGTCTCCCCGTCATCGCCGGCTGCGTGATGATCTGGAAGTCCGACTGGG
GATACCACCCGGCAGTTCCAGTTGCCGGATACGCCATCACCGGCTTCTTC
GGACCTGTTGTCAGCCTTATCATCACCCTCGGTGCCAGCAACGTAGCCGG
TGCGACCAAGAAAACCGTCATGGCGGCCACCGTGTTTGTCGCCTACACTG
TGGGTAACATCATCGGGCCGCAGCTGGTGAACAGCAAGACCGTCGACCAG
CACTACCCGGAGCTGTGGGAGGGCATGGTGATCTGCTACTGCATCACCAT
CGCGGCCGCGGTAGCGCTATACGTTCTCTTGTGGCGGGAGAACCGGCGTC
GCGATGCCATGGATCTGGACGAGAGCCAGCGCGACAAGCTGGCGTTCCAA
GATCTGACGGACAAGCAGAACCCGTTCTTCCGCTACGTGCTGTAG back to topCoding sequence (CDS) from alignment at An12:2255251..2257045+ >CBS51388_008120-T1 ID=CBS51388_008120-T1|Name=CBS51388_008120-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7605bp|location=Sequence derived from alignment at An12:2255251..2257045+ (Aspergillus niger CBS 513.88)
ATGATTCAGGCCGAATCGCAGACAATAGCTGCGTCTGCGACTGCTCCCAC
GGATAAAGATGTCGCCTGGGCCATAGTCAGTGAAGAAGCGGGGGAGATTG
ACCCCGCCGTGGAGAAGAGGGTGGTGCGCAAGATTGATGCTTTTTTCATG
CCTGCTATGTTAATTGGATATGGATTTGTTTACTGGGATAAGGCCATTCT
TGGCAGCGCATCACTGTTCGGCATGACAACCGATTTGCAACTGCAGGTCA
TGGATTACTCCACATCGCCTGCCACCAAAGATACCTCCCGTCTCAGCTGG
GCCACCTCCATCTTCTACTTTGGTATGATGGCCGGGTTGTACCCCATGAC
CTTTGTGCTGCAGCGGTTTCGTATCCAGCACGTCTTGGGGCCGGTCGTCA
TGCTGTGGGCCATTACCTGTGCTGCTACGGCGGGAGTCACCTCGTGGCGG
GGGTTGTTTGTGCAGCGGTTTTTTCTGGGCTTCGTGGAGAGTGTCATCCC
TACCGGCTTCATGACTGTCGTCAGTGGTTACTATACCCAAGACGAGCAGA
GTCTGCGCCAGGCCTGGTGGTTCTCCGGTACCGGGTGGTTCACCATTATC
GGAAGTGCGCTCAACTATGCGTTTGGACAGATCGATTCTGGCAGCCTTAG
GCCTTGGCAGTATATCTACATTTTCGCCGGTGTGCTGACTTTTCTATTCG
GGATCTGGTGCTGTGCCATGCCCAATTCGCCCGTCGAGGCGTGGTTTCTG
ACCCATGAGGAAAGAGTAGTGGCCGTGGAGCGCCTGCGTCGGGGACAGAC
TGGTGTGCGCTGCCAGGTGATCAAGAAAGATCAAATTGTGGAGGCATTCC
TGGACATCAAATTGTATTTGATTGCTATTATGATGGCTGCAGCGTATACT
ATTAACGGCGCCATTTCCGGATTCGGCCCCCTGATCGTGTCAACCTTTGG
CTACAACACCCTCGACTCCATTCTGTTCCAATTCCCAGTGGGTGGGGTCT
GCGTCATCTTCATCCCCCTCTGCGGTTACATCGGCATGCGCGTTCCTAAC
ACGCGCATTCCCATGCTCATCGCCTGCTGTCTCCCCGTCATCGCCGGCTG
CGTGATGATCTGGAAGTCCGACTGGGGATACCACCCGGCAGTTCCAGTTG
CCGGATACGCCATCACCGGCTTCTTCGGACCTGTTGTCAGCCTTATCATC
ACCCTCGGTGCCAGCAACGTAGCCGGTGCGACCAAGAAAACCGTCATGGC
GGCCACCGTGTTTGTCGCCTACACTGTGGGTAACATCATCGGGCCGCAGC
TGGTGAACAGCAAGACCGTCGACCAGCACTACCCGGAGCTGTGGGAGGGC
ATGGTGATCTGCTACTGCATCACCATCGCGGCCGCGGTAGCGCTATACGT
TCTCTTGTGGCGGGAGAACCGGCGTCGCGATGCCATGGATCTGGACGAGA
GCCAGCGCGACAAGCTGGCGTTCCAAGATCTGACGGACAAGCAGAACCCG
TTCTTCCGCTACGTGCTGTAGATGATTCAGGCCGAATCGCAGACAATAGC
TGCGTCTGCGACTGCTCCCACGGATAAAGATGTCGCCTGGGCCATAGTCA
GTGAAGAAGCGGGGGAGATTGACCCCGCCGTGGAGAAGAGGGTGGTGCGC
AAGATTGATGCTTTTTTCATGCCTGCTATGTTAATTGGATATGGATTTGT
TTACTGGGATAAGGCCATTCTTGGCAGCGCATCACTGTTCGGCATGACAA
CCGATTTGCAACTGCAGGTCATGGATTACTCCACATCGCCTGCCACCAAA
GATACCTCCCGTCTCAGCTGGGCCACCTCCATCTTCTACTTTGGTATGAT
GGCCGGGTTGTACCCCATGACCTTTGTGCTGCAGCGGTTTCGTATCCAGC
ACGTCTTGGGGCCGGTCGTCATGCTGTGGGCCATTACCTGTGCTGCTACG
GCGGGAGTCACCTCGTGGCGGGGGTTGTTTGTGCAGCGGTTTTTTCTGGG
CTTCGTGGAGAGTGTCATCCCTACCGGCTTCATGACTGTCGTCAGTGGTT
ACTATACCCAAGACGAGCAGAGTCTGCGCCAGGCCTGGTGGTTCTCCGGT
ACCGGGTGGTTCACCATTATCGGAAGTGCGCTCAACTATGCGTTTGGACA
GATCGATTCTGGCAGCCTTAGGCCTTGGCAGTATATCTACATTTTCGCCG
GTGTGCTGACTTTTCTATTCGGGATCTGGTGCTGTGCCATGCCCAATTCG
CCCGTCGAGGCGTGGTTTCTGACCCATGAGGAAAGAGTAGTGGCCGTGGA
GCGCCTGCGTCGGGGACAGACTGGTGTGCGCTGCCAGGTGATCAAGAAAG
ATCAAATTGTGGAGGCATTCCTGGACATCAAATTGTATTTGATTGCTATT
ATGATGGCTGCAGCGTATACTATTAACGGCGCCATTTCCGGATTCGGCCC
CCTGATCGTGTCAACCTTTGGCTACAACACCCTCGACTCCATTCTGTTCC
AATTCCCAGTGGGTGGGGTCTGCGTCATCTTCATCCCCCTCTGCGGTTAC
ATCGGCATGCGCGTTCCTAACACGCGCATTCCCATGCTCATCGCCTGCTG
TCTCCCCGTCATCGCCGGCTGCGTGATGATCTGGAAGTCCGACTGGGGAT
ACCACCCGGCAGTTCCAGTTGCCGGATACGCCATCACCGGCTTCTTCGGA
CCTGTTGTCAGCCTTATCATCACCCTCGGTGCCAGCAACGTAGCCGGTGC
GACCAAGAAAACCGTCATGGCGGCCACCGTGTTTGTCGCCTACACTGTGG
GTAACATCATCGGGCCGCAGCTGGTGAACAGCAAGACCGTCGACCAGCAC
TACCCGGAGCTGTGGGAGGGCATGGTGATCTGCTACTGCATCACCATCGC
GGCCGCGGTAGCGCTATACGTTCTCTTGTGGCGGGAGAACCGGCGTCGCG
ATGCCATGGATCTGGACGAGAGCCAGCGCGACAAGCTGGCGTTCCAAGAT
CTGACGGACAAGCAGAACCCGTTCTTCCGCTACGTGCTGTAGATGATTCA
GGCCGAATCGCAGACAATAGCTGCGTCTGCGACTGCTCCCACGGATAAAG
ATGTCGCCTGGGCCATAGTCAGTGAAGAAGCGGGGGAGATTGACCCCGCC
GTGGAGAAGAGGGTGGTGCGCAAGATTGATGCTTTTTTCATGCCTGCTAT
GTTAATTGGATATGGATTTGTTTACTGGGATAAGGCCATTCTTGGCAGCG
CATCACTGTTCGGCATGACAACCGATTTGCAACTGCAGGTCATGGATTAC
TCCACATCGCCTGCCACCAAAGATACCTCCCGTCTCAGCTGGGCCACCTC
CATCTTCTACTTTGGTATGATGGCCGGGTTGTACCCCATGACCTTTGTGC
TGCAGCGGTTTCGTATCCAGCACGTCTTGGGGCCGGTCGTCATGCTGTGG
GCCATTACCTGTGCTGCTACGGCGGGAGTCACCTCGTGGCGGGGGTTGTT
TGTGCAGCGGTTTTTTCTGGGCTTCGTGGAGAGTGTCATCCCTACCGGCT
TCATGACTGTCGTCAGTGGTTACTATACCCAAGACGAGCAGAGTCTGCGC
CAGGCCTGGTGGTTCTCCGGTACCGGGTGGTTCACCATTATCGGAAGTGC
GCTCAACTATGCGTTTGGACAGATCGATTCTGGCAGCCTTAGGCCTTGGC
AGTATATCTACATTTTCGCCGGTGTGCTGACTTTTCTATTCGGGATCTGG
TGCTGTGCCATGCCCAATTCGCCCGTCGAGGCGTGGTTTCTGACCCATGA
GGAAAGAGTAGTGGCCGTGGAGCGCCTGCGTCGGGGACAGACTGGTGTGC
GCTGCCAGGTGATCAAGAAAGATCAAATTGTGGAGGCATTCCTGGACATC
AAATTGTATTTGATTGCTATTATGATGGCTGCAGCGTATACTATTAACGG
CGCCATTTCCGGATTCGGCCCCCTGATCGTGTCAACCTTTGGCTACAACA
CCCTCGACTCCATTCTGTTCCAATTCCCAGTGGGTGGGGTCTGCGTCATC
TTCATCCCCCTCTGCGGTTACATCGGCATGCGCGTTCCTAACACGCGCAT
TCCCATGCTCATCGCCTGCTGTCTCCCCGTCATCGCCGGCTGCGTGATGA
TCTGGAAGTCCGACTGGGGATACCACCCGGCAGTTCCAGTTGCCGGATAC
GCCATCACCGGCTTCTTCGGACCTGTTGTCAGCCTTATCATCACCCTCGG
TGCCAGCAACGTAGCCGGTGCGACCAAGAAAACCGTCATGGCGGCCACCG
TGTTTGTCGCCTACACTGTGGGTAACATCATCGGGCCGCAGCTGGTGAAC
AGCAAGACCGTCGACCAGCACTACCCGGAGCTGTGGGAGGGCATGGTGAT
CTGCTACTGCATCACCATCGCGGCCGCGGTAGCGCTATACGTTCTCTTGT
GGCGGGAGAACCGGCGTCGCGATGCCATGGATCTGGACGAGAGCCAGCGC
GACAAGCTGGCGTTCCAAGATCTGACGGACAAGCAGAACCCGTTCTTCCG
CTACGTGCTGTAGATGATTCAGGCCGAATCGCAGACAATAGCTGCGTCTG
CGACTGCTCCCACGGATAAAGATGTCGCCTGGGCCATAGTCAGTGAAGAA
GCGGGGGAGATTGACCCCGCCGTGGAGAAGAGGGTGGTGCGCAAGATTGA
TGCTTTTTTCATGCCTGCTATGTTAATTGGATATGGATTTGTTTACTGGG
ATAAGGCCATTCTTGGCAGCGCATCACTGTTCGGCATGACAACCGATTTG
CAACTGCAGGTCATGGATTACTCCACATCGCCTGCCACCAAAGATACCTC
CCGTCTCAGCTGGGCCACCTCCATCTTCTACTTTGGTATGATGGCCGGGT
TGTACCCCATGACCTTTGTGCTGCAGCGGTTTCGTATCCAGCACGTCTTG
GGGCCGGTCGTCATGCTGTGGGCCATTACCTGTGCTGCTACGGCGGGAGT
CACCTCGTGGCGGGGGTTGTTTGTGCAGCGGTTTTTTCTGGGCTTCGTGG
AGAGTGTCATCCCTACCGGCTTCATGACTGTCGTCAGTGGTTACTATACC
CAAGACGAGCAGAGTCTGCGCCAGGCCTGGTGGTTCTCCGGTACCGGGTG
GTTCACCATTATCGGAAGTGCGCTCAACTATGCGTTTGGACAGATCGATT
CTGGCAGCCTTAGGCCTTGGCAGTATATCTACATTTTCGCCGGTGTGCTG
ACTTTTCTATTCGGGATCTGGTGCTGTGCCATGCCCAATTCGCCCGTCGA
GGCGTGGTTTCTGACCCATGAGGAAAGAGTAGTGGCCGTGGAGCGCCTGC
GTCGGGGACAGACTGGTGTGCGCTGCCAGGTGATCAAGAAAGATCAAATT
GTGGAGGCATTCCTGGACATCAAATTGTATTTGATTGCTATTATGATGGC
TGCAGCGTATACTATTAACGGCGCCATTTCCGGATTCGGCCCCCTGATCG
TGTCAACCTTTGGCTACAACACCCTCGACTCCATTCTGTTCCAATTCCCA
GTGGGTGGGGTCTGCGTCATCTTCATCCCCCTCTGCGGTTACATCGGCAT
GCGCGTTCCTAACACGCGCATTCCCATGCTCATCGCCTGCTGTCTCCCCG
TCATCGCCGGCTGCGTGATGATCTGGAAGTCCGACTGGGGATACCACCCG
GCAGTTCCAGTTGCCGGATACGCCATCACCGGCTTCTTCGGACCTGTTGT
CAGCCTTATCATCACCCTCGGTGCCAGCAACGTAGCCGGTGCGACCAAGA
AAACCGTCATGGCGGCCACCGTGTTTGTCGCCTACACTGTGGGTAACATC
ATCGGGCCGCAGCTGGTGAACAGCAAGACCGTCGACCAGCACTACCCGGA
GCTGTGGGAGGGCATGGTGATCTGCTACTGCATCACCATCGCGGCCGCGG
TAGCGCTATACGTTCTCTTGTGGCGGGAGAACCGGCGTCGCGATGCCATG
GATCTGGACGAGAGCCAGCGCGACAAGCTGGCGTTCCAAGATCTGACGGA
CAAGCAGAACCCGTTCTTCCGCTACGTGCTGTAGATGATTCAGGCCGAAT
CGCAGACAATAGCTGCGTCTGCGACTGCTCCCACGGATAAAGATGTCGCC
TGGGCCATAGTCAGTGAAGAAGCGGGGGAGATTGACCCCGCCGTGGAGAA
GAGGGTGGTGCGCAAGATTGATGCTTTTTTCATGCCTGCTATGTTAATTG
GATATGGATTTGTTTACTGGGATAAGGCCATTCTTGGCAGCGCATCACTG
TTCGGCATGACAACCGATTTGCAACTGCAGGTCATGGATTACTCCACATC
GCCTGCCACCAAAGATACCTCCCGTCTCAGCTGGGCCACCTCCATCTTCT
ACTTTGGTATGATGGCCGGGTTGTACCCCATGACCTTTGTGCTGCAGCGG
TTTCGTATCCAGCACGTCTTGGGGCCGGTCGTCATGCTGTGGGCCATTAC
CTGTGCTGCTACGGCGGGAGTCACCTCGTGGCGGGGGTTGTTTGTGCAGC
GGTTTTTTCTGGGCTTCGTGGAGAGTGTCATCCCTACCGGCTTCATGACT
GTCGTCAGTGGTTACTATACCCAAGACGAGCAGAGTCTGCGCCAGGCCTG
GTGGTTCTCCGGTACCGGGTGGTTCACCATTATCGGAAGTGCGCTCAACT
ATGCGTTTGGACAGATCGATTCTGGCAGCCTTAGGCCTTGGCAGTATATC
TACATTTTCGCCGGTGTGCTGACTTTTCTATTCGGGATCTGGTGCTGTGC
CATGCCCAATTCGCCCGTCGAGGCGTGGTTTCTGACCCATGAGGAAAGAG
TAGTGGCCGTGGAGCGCCTGCGTCGGGGACAGACTGGTGTGCGCTGCCAG
GTGATCAAGAAAGATCAAATTGTGGAGGCATTCCTGGACATCAAATTGTA
TTTGATTGCTATTATGATGGCTGCAGCGTATACTATTAACGGCGCCATTT
CCGGATTCGGCCCCCTGATCGTGTCAACCTTTGGCTACAACACCCTCGAC
TCCATTCTGTTCCAATTCCCAGTGGGTGGGGTCTGCGTCATCTTCATCCC
CCTCTGCGGTTACATCGGCATGCGCGTTCCTAACACGCGCATTCCCATGC
TCATCGCCTGCTGTCTCCCCGTCATCGCCGGCTGCGTGATGATCTGGAAG
TCCGACTGGGGATACCACCCGGCAGTTCCAGTTGCCGGATACGCCATCAC
CGGCTTCTTCGGACCTGTTGTCAGCCTTATCATCACCCTCGGTGCCAGCA
ACGTAGCCGGTGCGACCAAGAAAACCGTCATGGCGGCCACCGTGTTTGTC
GCCTACACTGTGGGTAACATCATCGGGCCGCAGCTGGTGAACAGCAAGAC
CGTCGACCAGCACTACCCGGAGCTGTGGGAGGGCATGGTGATCTGCTACT
GCATCACCATCGCGGCCGCGGTAGCGCTATACGTTCTCTTGTGGCGGGAG
AACCGGCGTCGCGATGCCATGGATCTGGACGAGAGCCAGCGCGACAAGCT
GGCGTTCCAAGATCTGACGGACAAGCAGAACCCGTTCTTCCGCTACGTGC
TGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2255251..2257045 + |
|
