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CBS51388_008129-T1, CBS51388_008129-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008129-T1
Unique NameCBS51388_008129-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2274098..2275214+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008129-T1 ID=CBS51388_008129-T1|Name=CBS51388_008129-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1117bp|location=Sequence derived from alignment at An12:2274098..2275214+ (Aspergillus niger CBS 513.88)
ATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCGCTCA
GCGCCAAAAGATGGTCGCCGTTTTCGTGGGAGGCACCAGCGGCATAGGAG
AAGCAACAGCCAAGCAGATGGCGCTCGCTGTGAAACAACCAACCATCCAC
CTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGCTCCG
GGCTTCCAATCCAAGCGGATCATATAACTTCATTCAATCGGATGTCTCAC
TTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGAAAAG
CAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCAAGAA
CGGTACGTAGCTGAAACAGCCTCATCCTGGTCAGTCGGAACGGCTTCAAA
CGCCACTGCGCCAACCCCAACACCCCTATACCTTACTAGTGCTGACAGGG
GGATCCGCACACAGAAACCGACGAGGGACTAGACGACAACCATGCCCTTC
GTTACTACTCCCGCATGCGCTTCGTGCAGAGTCTCATGCCACTGCTCAGT
GCCTCTTCCGGTCCAGCCAGGGTCGTATCCATCCTAGCGGGCGGCCAGGA
AGGCACCATGGAGGAAGACAATTTCGACCTGAGGAAATCTTGGAGTTTTA
CGAAAGGAAACACATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCAT
CTAGCCACCGCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTAT
TGTACGGACTCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCA
TCCTAAGCTTTCTTTCTCGTCCGATTTCAATGTCCCCGGAGGAGAGTGGC
GAGCGTAATTTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCC
GAAAGATCCATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGG
CGTCTGCATCAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATAC
GATGGGAGTAATGCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAG
GAGTTTCCCTGGTAAGGTTTGGGACCATACACTGGAGACATTCAAGCGGG
TGCTGCGGTCAGACTGA
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Coding sequence (CDS) from alignment at An12:2274098..2275214+

>CBS51388_008129-T1 ID=CBS51388_008129-T1|Name=CBS51388_008129-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2010bp|location=Sequence derived from alignment at An12:2274098..2275214+ (Aspergillus niger CBS 513.88)
ATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCGCTCA
GCGCCAAAAGATGGTCGCCGTTTTCGTGGGAGGCACCAGCGGCATAGGAG
AAGCAACAGCCAAGCAGATGGCGCTCGCTGTGAAACAACCAACCATCCAC
CTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGCTCCG
GGCTTCCAATCCAAGCGGATCATATAACTTCATTCAATCGGATGTCTCAC
TTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGAAAAG
CAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCAAGAA
CGAAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTACTCCC
GCATGCGCTTCGTGCAGAGTCTCATGCCACTGCTCAGTGCCTCTTCCGGT
CCAGCCAGGGTCGTATCCATCCTAGCGGGCGGCCAGGAAGGCACCATGGA
GGAAGACAATTTCGACCTGAGGAAATCTTGGAGTTTTACGAAAGGAAACA
CATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCACCGCC
CATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGGACTCC
ATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTAAGCTTTC
TTTCTCGTCCGATTTCAATGTCCCCGGAGGAGAGTGGCGAGCGTAATTTG
TTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGATCCATC
CCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGCATCAA
CTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGAGTAAT
GCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTCCCTGG
TAAGGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCGGTCAG
ACTGAATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGC
GCTCAGCGCCAAAAGATGGTCGCCGTTTTCGTGGGAGGCACCAGCGGCAT
AGGAGAAGCAACAGCCAAGCAGATGGCGCTCGCTGTGAAACAACCAACCA
TCCACCTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAG
CTCCGGGCTTCCAATCCAAGCGGATCATATAACTTCATTCAATCGGATGT
CTCACTTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGG
AAAAGCAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCC
AAGAACGAAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTA
CTCCCGCATGCGCTTCGTGCAGAGTCTCATGCCACTGCTCAGTGCCTCTT
CCGGTCCAGCCAGGGTCGTATCCATCCTAGCGGGCGGCCAGGAAGGCACC
ATGGAGGAAGACAATTTCGACCTGAGGAAATCTTGGAGTTTTACGAAAGG
AAACACATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCA
CCGCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGG
ACTCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTAAG
CTTTCTTTCTCGTCCGATTTCAATGTCCCCGGAGGAGAGTGGCGAGCGTA
ATTTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGAT
CCATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGC
ATCAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGA
GTAATGCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTC
CCTGGTAAGGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCG
GTCAGACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008129CBS51388_008129Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008129-T1.exon1CBS51388_008129-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008129-T1.exon2CBS51388_008129-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008129-T1.cdsCBS51388_008129-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008129-T1CBS51388_008129-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2274098..2275214 +
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