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CBS51388_008152-T1, CBS51388_008152-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008152-T1
Unique NameCBS51388_008152-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2319522..2320851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008152-T1 ID=CBS51388_008152-T1|Name=CBS51388_008152-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1330bp|location=Sequence derived from alignment at An12:2319522..2320851+ (Aspergillus niger CBS 513.88)
ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAA
AGTCCACATCGCCGACACCCCCATCACCCTCCGGAACTGGCACAAACATG
TCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC
ATCCAAGCTCTCTGGACACCTCTACGACTAAAAACCGCCATCTGGGCAGT
AGCATACTACTTCTTCACAGCCCTAGGCGTCACAGCAGGTCTGTCCCACC
ACCACCATACCCCCCTCTCACATCCCCTCTTCTAACCCATCGTAACCAAA
AGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCCCC
TCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCA
CGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACGGA
GCGGGACCCTTACTCCGTACACAAGGGCATCTTCTACGCGCACTTCGGCT
GGATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCC
GATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAA
GATCGTGGTCCTCATGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCATCT
GGGGTGATTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTC
TTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGG
CGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGG
CGTTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTCCG
TCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTG
GGCCATTTGGTGCTGGGGACAGATGGGGTTGGCGCGTGATTTGAAGATGT
TTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAG
GTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTT
GCCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGT
TAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTCGTAAAGGAA
CATCCTGGTGGGAGGGCTATGATCCAGGCTGGTGTTGGGAAGGATGCGAC
CGCTATGTTTAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATC
TGCTGTCGATGATGCGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGGAG
ATTTGGAAGAGGCCGCAGAAGGAGATGTAG
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Coding sequence (CDS) from alignment at An12:2319522..2320851+

>CBS51388_008152-T1 ID=CBS51388_008152-T1|Name=CBS51388_008152-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2532bp|location=Sequence derived from alignment at An12:2319522..2320851+ (Aspergillus niger CBS 513.88)
ATGCCAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAA
AGTCCACATCGCCGACACCCCCATCACCCTCCGGAACTGGCACAAACATG
TCAACTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGGCTGC
ATCCAAGCTCTCTGGACACCTCTACGACTAAAAACCGCCATCTGGGCAGT
AGCATACTACTTCTTCACAGCCCTAGGCGTCACAGCAGGCTACCACCGCC
TCTGGGCCCACAGATCCTACACAGCAACCCTCCCCCTCCGCATCACCCTG
GCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCGCACGCTGGTGGGCACG
CCTGCACCGCTCGCACCACCGGTACACAGACACGGAGCGGGACCCTTACT
CCGTACACAAGGGCATCTTCTACGCGCACTTCGGCTGGATGATACTGAAG
CAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGATCTCAACGCCGA
CCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAAGATCGTGGTCCTCA
TGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCATCTGGGGTGATTGGTGG
GGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTTCGTGCAGCAGGC
CACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGGCGAGCAGCCGTTCG
ATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCGTTGGCGACGATG
GGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTCAGATTATCGCAA
TGCTATTCGGTGGTATCAGTATGATCCGACCAAGTGGGCCATTTGGTGCT
GGGGACAGATGGGGTTGGCGCGTGATTTGAAGATGTTTCGCGAGAATGAG
ATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAGGTGGATAAGAAACG
GGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTTGCCGGTTATGGAGT
GGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTAGTCGTTGTTGCT
GGGGTGGTGCATGATGTTGAGGACTTCGTAAAGGAACATCCTGGTGGGAG
GGCTATGATCCAGGCTGGTGTTGGGAAGGATGCGACCGCTATGTTTAATG
GTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTGCTGTCGATGATG
CGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGGAGATTTGGAAGAGGCC
GCAGAAGGAGATGTAGATGCCAGGCGAAACCAATATACCCCCTCGTCGAG
ACAGACATGTCTCCAAAGTCCACATCGCCGACACCCCCATCACCCTCCGG
AACTGGCACAAACATGTCAACTGGCTGAACGTGACCATGATCGTCCTGAT
CCCCCTCTACGGCTGCATCCAAGCTCTCTGGACACCTCTACGACTAAAAA
CCGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTAGGCGTCACA
GCAGGCTACCACCGCCTCTGGGCCCACAGATCCTACACAGCAACCCTCCC
CCTCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCCGTCCAAGGTTCCG
CACGCTGGTGGGCACGCCTGCACCGCTCGCACCACCGGTACACAGACACG
GAGCGGGACCCTTACTCCGTACACAAGGGCATCTTCTACGCGCACTTCGG
CTGGATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCT
CCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTG
AAGATCGTGGTCCTCATGGGGCTTGTCGTTCCGATGCTCGTCGCAGGCAT
CTGGGGTGATTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCT
TCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTC
GGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCAC
GGCGTTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTC
CGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAG
TGGGCCATTTGGTGCTGGGGACAGATGGGGTTGGCGCGTGATTTGAAGAT
GTTTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGA
AGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAG
TTGCCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGC
GTTAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTCGTAAAGG
AACATCCTGGTGGGAGGGCTATGATCCAGGCTGGTGTTGGGAAGGATGCG
ACCGCTATGTTTAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAA
TCTGCTGTCGATGATGCGGGTGGCAGTTATTCGGGGTGGGAGTGAGGTGG
AGATTTGGAAGAGGCCGCAGAAGGAGATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006636unsaturated fatty acid biosynthetic process
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004768stearoyl-CoA 9-desaturase activity
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OLE1_2CBS51388_008152Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008152-T1.exon1CBS51388_008152-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008152-T1.exon2CBS51388_008152-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008152-T1.cdsCBS51388_008152-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008152-T1CBS51388_008152-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018506
DBxrefInterPro:IPR001522
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR009160
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR001199
DBxrefInterPro:IPR015876
DBxrefPFAM:PF00487
DBxrefPFAM:PF00173
Productstearoyl-CoA 9-desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2319522..2320851 +
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